Basic Information

Insect: Yponomeuta evonymella
Gene Symbol: -
Assembly: GCA_963969515.1
Location: OZ018373.1:885904-887547[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2 1.6e+02 3.9 1.7 3 23 218 239 216 239 0.89

2 10 5.7e-05 0.0047 18.2 0.3 1 23 245 267 245 267 0.98

3 10 0.022 1.8 10.0 0.7 3 23 275 296 274 296 0.96

4 10 0.0015 0.13 13.7 0.1 1 20 302 321 302 323 0.94

5 10 1.7e-07 1.4e-05 26.2 1.0 2 23 344 365 343 365 0.98

6 10 6.9e-07 5.7e-05 24.2 1.8 1 23 372 394 372 394 0.98

7 10 0.00014 0.012 16.9 0.4 1 23 400 422 400 422 0.97

8 10 8.2e-06 0.00068 20.8 2.1 1 23 428 450 428 450 0.96

9 10 4.7e-05 0.0039 18.5 2.7 1 23 456 478 456 478 0.98

10 10 0.0017 0.14 13.6 3.2 1 23 484 507 484 507 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2	1.6e+02	3.9	1.7	3	23	218	239	216	239	0.89
2	10	5.7e-05	0.0047	18.2	0.3	1	23	245	267	245	267	0.98
3	10	0.022	1.8	10.0	0.7	3	23	275	296	274	296	0.96
4	10	0.0015	0.13	13.7	0.1	1	20	302	321	302	323	0.94
5	10	1.7e-07	1.4e-05	26.2	1.0	2	23	344	365	343	365	0.98
6	10	6.9e-07	5.7e-05	24.2	1.8	1	23	372	394	372	394	0.98
7	10	0.00014	0.012	16.9	0.4	1	23	400	422	400	422	0.97
8	10	8.2e-06	0.00068	20.8	2.1	1	23	428	450	428	450	0.96
9	10	4.7e-05	0.0039	18.5	2.7	1	23	456	478	456	478	0.98
10	10	0.0017	0.14	13.6	3.2	1	23	484	507	484	507	0.96

Sequence Information

Coding Sequence: ATGTCGGAGGCTGAAGACACATATTGTAGGCTTTGTGCCGAACCTACTCCCCTAGAACAACTAATTTCATGCGACGACGATGTTGGACAAAACTCTAAGATAACCAGCAAAATGTTGTGGATAAACATAGATATTTCAAACACTCAAGTCCTGCCGAAAACCATCTGCTTCTCATGCTTCGACCTTTTGGAGCGAGCCTGGAAATTCCTGCACAATGTCCGGACCGCACAAGCGAAGCTGAACCAAATTTACTCTGTCAAAATAGACTTGGAAGATGCGGAGAATATTGGCAGGCCTGTAGACAAAGACTGGGAGAAATTCTGCGATCCAAAGCCGGAGGTTAAGAGTGAGCCGAAAGCTAATGACTCTGTTGAGGTGTCAGGTACAGACAGTCTGCTCAAAGAGATAAAATACGAGCCTTGTGATAGCGACCACGAAGGCGTAGATATCCACGACTCCTTAGGCTCATCAGACAGCGACAGACCTCTCAAACGCTCCTCCAAGAAGAAGAAAGTCAAATCAAAGCGTAAGCCCAAGAAAAAGTATGACGAAGAGATCTTGACTGAAGAATTATTACCAAACCCAACTGCAGAGGTCATTCAATTAGATATGTCCCTCTACACAATGACCTGGGAGGATTACACATGGTGTTGCGCCAACTGTGATGCTCAGTGCAAGACTGTAGATCTGCTACGCCTCCATTCTCAAGAGATTCACCGCTGCTGCCCATCATTCAAGTGCTCAGACTGTGGCAAAGCCATTTCCACGTACACTGCATTCGTAACTCACATAAGACTGCACTACAAGTCATTGAGACGTAACTGCGACATGTGCAATAAGTACTTTAAGTGGTCCGCTGTGCTCAAGAGGCACCGGAACATGGCCCACAGAGAAACATACATCCACAGCTGCAGGAACTGTGGAGCTAGTTTTGAGACTGAAGACATGCTGCAACAACACTTAATTCTGTTCGCCAAGAGTTACAAAAAACAGCAGATATTGAAGCAAGAAAAGCTGgacacagacatgaaatgtgACGTGTGTGGTCGCGAGTTTAAATCGCGCAGCAACCTTCAAGCGCATCGACAAACTCACATGGAACGTTCCAGGGACTTCTCATGCCATATGTGTGGGAAAATGTTCTATACGAAAGGTGCTCTGAGCACCCACATGGCTACACATGAAGACAACAAGCCTTTTAAATGCCAGTTCTGTCCGATGGCCTTCAGGGCCCGAGGTAACCTGACCTCCCACATAAGCCTGCACTCTGGTGCTAAACCTTTTGTCTGCGAACAGTGCGGGAAGAGTTTCCGGGTAAAAAGGCATTTAAAATCCCATTCCATAGTGCACACTGACTTGATGCCGTATATTTGTGAGTACTGCAACAAGTCGTTCCGTTTTAAGACGCGTTTGAATTTACATGTACGTCAGCACACAGGGGCTAAACCGTACACGTGTATTTACTGCCGTAGAGACTTTACAAATGGGTCGAACTATAAGAAACACATGCAGCGTAGACATAATATTGACACATCCATCAGGAAAAAGATTTACAATAGTTTGCCAAACAATGCTGCAGTGAATTTAGAGatattaaataatgttaataacaTTGATAGTCAATCAACAACAGTTATCAGTTAA
Protein Sequence: MSEAEDTYCRLCAEPTPLEQLISCDDDVGQNSKITSKMLWINIDISNTQVLPKTICFSCFDLLERAWKFLHNVRTAQAKLNQIYSVKIDLEDAENIGRPVDKDWEKFCDPKPEVKSEPKANDSVEVSGTDSLLKEIKYEPCDSDHEGVDIHDSLGSSDSDRPLKRSSKKKKVKSKRKPKKKYDEEILTEELLPNPTAEVIQLDMSLYTMTWEDYTWCCANCDAQCKTVDLLRLHSQEIHRCCPSFKCSDCGKAISTYTAFVTHIRLHYKSLRRNCDMCNKYFKWSAVLKRHRNMAHRETYIHSCRNCGASFETEDMLQQHLILFAKSYKKQQILKQEKLDTDMKCDVCGREFKSRSNLQAHRQTHMERSRDFSCHMCGKMFYTKGALSTHMATHEDNKPFKCQFCPMAFRARGNLTSHISLHSGAKPFVCEQCGKSFRVKRHLKSHSIVHTDLMPYICEYCNKSFRFKTRLNLHVRQHTGAKPYTCIYCRRDFTNGSNYKKHMQRRHNIDTSIRKKIYNSLPNNAAVNLEILNNVNNIDSQSTTVIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01545966;
90% Identity: iTF_01545966;
80% Identity: iTF_01545098;