Yevo030378.1
Basic Information
- Insect
- Yponomeuta evonymella
- Gene Symbol
- Zbtb41
- Assembly
- GCA_963969515.1
- Location
- OZ018372.1:1718788-1754690[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0012 0.1 14.0 0.2 1 23 297 319 297 320 0.95 2 13 7.7e-05 0.0064 17.8 0.4 1 23 327 349 327 349 0.98 3 13 0.099 8.3 8.0 0.3 1 20 388 407 388 409 0.95 4 13 0.0019 0.16 13.4 1.2 1 20 413 432 413 435 0.94 5 13 0.00077 0.064 14.6 2.9 2 22 444 464 443 468 0.92 6 13 0.89 74 5.0 2.4 1 23 476 499 476 499 0.86 7 13 5.3e-05 0.0044 18.3 0.6 1 23 505 528 505 528 0.95 8 13 2.9e-06 0.00024 22.3 1.3 2 23 541 562 540 562 0.97 9 13 0.0013 0.11 13.9 0.0 1 23 568 591 568 591 0.96 10 13 5.5e-05 0.0046 18.2 1.5 1 23 606 629 606 629 0.96 11 13 0.00077 0.064 14.6 0.9 1 23 635 658 635 658 0.96 12 13 7.4e-05 0.0061 17.8 1.1 1 23 666 688 666 688 0.98 13 13 0.0031 0.26 12.7 2.4 1 23 695 718 695 718 0.95
Sequence Information
- Coding Sequence
- ATGTTAGAGCTCAAATGGGCTTTGTCAAAGATAAAATGGGATATAATTGGATTGTCTGAGGTCAGAAGAGAAGGCACACACATAATAGAACAGGATTGGAGCATCTTCTGCTACAGCGGCAAAGCAAAACAATTCGGAACAGGATTTATTATAAAGAAAGAGTACAAAGACAACATCAAGGAGTTTATAGCTATATCAGACAGAGTCTCACTACTAAATCTCGAATTTCCAAACTTCCCTATTTCTATTATACAAGTATATGCACCAACAGAAGCCGCAAATGAAGAGGATATCGAATCTTTTTATGAAGATGTAGAGAACGCGAAACTGAAGGCTGCGAAGAACTTAGTTGTGATGGGCGACCTAAACGCTAAAATAGGCACACCAAAAATAGAGGAAAGCCAGATCATGGGGAAATATGGTTATGGTACCAGAAATAAACGAGGAGACAGACTGATAAGCTTTGCTCaagaaaacaatttaaaaattgtACCACTGCCAGCACAGACCAGTCTTGGCACAACTGAAGTTAACTTCCTGGACATAGCACCGTTGGAGGCAGAGCCATCGAGTTATTTTTCGACCAAAAATGAGCCTCCGgCATTCATGCATAACGTAAAACTCGAAAATAATTCGCCTGATGATGACAGTTCAGTAGTGGACTACGAAGAAGAAAAGGAAGCATTAGTAAATgAGCCAAACAATGAGGCAGAAGTGGGATTGGTCGAAAATATTGAGGTGGCGAAGAAAAAGACAGTCAAGAAGAAAAGTGTTAAATCTAAACCAGAATCCAGCAAAGCAAGCGAACCGCGCTGGAGTATCCGGTGGGTGACGTGTGAAAGAGCGACCAAATGGTACGAGGAGCAGAGAGCGAGCGAGACGGGAGACTTCGTATGCGCACAATGCAAGCGAAGCTTCGACGGCGAAGAGGCGCTCGCGCAACATATCAAAGGTCATCATGACGAAAGCGCGGGCGCTTTCCAGTGCAACGTATGCAAGTATAGACTAAGTTCACGCGCGTCCTTGCAGGCGCACATCGCGCGCCATTTCGTGGTGTGCGCGTGCGCGCTGTGCCCGTTCGAGGGGCGCACTGTGCGCGCTATCCGAGCGCACAATCGCGAGGTGCACGGGAAAGGGGCGGGGCGCGGGAAACCGACCTCCTACACGTGTCGACGTTGTAAAGAGAATTTTGCATCGTTTCCACTGCTGCGCGAGCACAGACTGGAGTGTAACACCTACAAGTGTGCGACTTGCGACCGGGTCTTCAAGAACAAATTCGCGTACTTCGACCACCTTCCTCTTCATAAGGAAGGCGGAAAGGATAAACTGTATTGTCAGGTCTGTGACAAGCATTTCACGAACCCGAAGTGGTTTCGGACTCACTTCCGCACCAGTCTCAAGCACGTCTCCCGAGATACCTTTCAACACGAGTGCCCGCACTGCCAGCTGCGTTTCCACATCGCCCAACGACTGAAGGAGCACGTCGCCGCTAAGCATCTCAACAGAGGACTCTACGCCTGCGATCTGTGCCCCAAGACCTTCTCGATCAATAAGAGTCTGAAGAAGCACCGCGCGCGCGTCCACAACATCGGCTCAGTAGCTGCGCCGGCGCGGGATAAGGTCTGCGAGCATTGCGGCAAAGCATTCACTTCCAACTGGTTCCTGAACGACCACATGCGTCTCCACACGGGTGAGAAGCCCTTCAAGTGCACCCTGTGTCCGGCCGCGTTCCCGCAAAACGGCACCCTGTATATTCACACGCTGGTCGTTCACAAGAAGAAGCTGCGCAAAGACGGACTAACGGACTCGCCTTCGTACCAATGTGAGGAGTGCGGCAAGGAGTTCCCTTCTAACAGCCGCATGCGCTCCCATCATAAGCTGGTCCATCTCAAACTGAGCCGGTACAACTGCGAGGTTTGTCACGTGCTATTCTCGTCGTCGGCGAGTCTCAAAAACCACCTGGCGTCGCGACACGGCGTTCTCGCCATCGACACCTTCAAGTGTGACGCTTGCGGGAAAAGATACAATACTAACACGGCTCTCAAGGCACACTCAAAGCGGCACGAAACAGCGAAGTGTGTCCACAAATGCCGCACGTGCGACGCGGAATTCAAGAGCTCCTCGGGCCTGCAGCTGCACTTCAAGTATGTCCATCTCAAGCTGAAGAGAAACGACAAAGTGACTCTGAAGAACGTCGGCGATCCAGAGAAGGAGCTTATTATAAACGGGGAACCCCAGAGAGCCACAACTTAA
- Protein Sequence
- MLELKWALSKIKWDIIGLSEVRREGTHIIEQDWSIFCYSGKAKQFGTGFIIKKEYKDNIKEFIAISDRVSLLNLEFPNFPISIIQVYAPTEAANEEDIESFYEDVENAKLKAAKNLVVMGDLNAKIGTPKIEESQIMGKYGYGTRNKRGDRLISFAQENNLKIVPLPAQTSLGTTEVNFLDIAPLEAEPSSYFSTKNEPPAFMHNVKLENNSPDDDSSVVDYEEEKEALVNEPNNEAEVGLVENIEVAKKKTVKKKSVKSKPESSKASEPRWSIRWVTCERATKWYEEQRASETGDFVCAQCKRSFDGEEALAQHIKGHHDESAGAFQCNVCKYRLSSRASLQAHIARHFVVCACALCPFEGRTVRAIRAHNREVHGKGAGRGKPTSYTCRRCKENFASFPLLREHRLECNTYKCATCDRVFKNKFAYFDHLPLHKEGGKDKLYCQVCDKHFTNPKWFRTHFRTSLKHVSRDTFQHECPHCQLRFHIAQRLKEHVAAKHLNRGLYACDLCPKTFSINKSLKKHRARVHNIGSVAAPARDKVCEHCGKAFTSNWFLNDHMRLHTGEKPFKCTLCPAAFPQNGTLYIHTLVVHKKKLRKDGLTDSPSYQCEECGKEFPSNSRMRSHHKLVHLKLSRYNCEVCHVLFSSSASLKNHLASRHGVLAIDTFKCDACGKRYNTNTALKAHSKRHETAKCVHKCRTCDAEFKSSSGLQLHFKYVHLKLKRNDKVTLKNVGDPEKELIINGEPQRATT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01545094; iTF_01543184; iTF_01546864;
- 90% Identity
- -
- 80% Identity
- -