Basic Information

Insect: Yponomeuta evonymella
Gene Symbol: ZEB2
Assembly: GCA_963969515.1
Location: OZ018372.1:1680719-1704180[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.7 2.2e+02 3.5 0.1 1 20 232 252 232 256 0.75

2 14 1.7e-05 0.0014 19.8 0.0 1 23 263 285 263 285 0.95

3 14 0.031 2.6 9.6 0.2 1 23 289 311 289 311 0.96

4 14 0.0051 0.42 12.1 0.2 3 20 328 345 327 347 0.92

5 14 0.0001 0.0083 17.4 0.7 1 20 351 370 351 373 0.94

6 14 0.0019 0.16 13.4 1.3 2 22 383 403 382 407 0.92

7 14 0.21 17 7.0 3.0 1 23 415 438 415 438 0.94

8 14 6.5e-05 0.0054 18.0 0.2 1 23 444 467 444 467 0.95

9 14 5.2e-06 0.00044 21.4 3.1 2 23 480 501 479 501 0.97

10 14 0.00061 0.051 14.9 0.1 1 23 507 530 507 530 0.96

11 14 0.019 1.6 10.2 2.3 1 23 548 571 548 571 0.96

12 14 4.1e-06 0.00034 21.8 1.0 1 23 577 600 577 600 0.93

13 14 2.5e-08 2.1e-06 28.8 0.7 1 23 608 630 608 630 0.99

14 14 0.012 0.97 10.9 1.0 1 23 637 660 637 660 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.7	2.2e+02	3.5	0.1	1	20	232	252	232	256	0.75
2	14	1.7e-05	0.0014	19.8	0.0	1	23	263	285	263	285	0.95
3	14	0.031	2.6	9.6	0.2	1	23	289	311	289	311	0.96
4	14	0.0051	0.42	12.1	0.2	3	20	328	345	327	347	0.92
5	14	0.0001	0.0083	17.4	0.7	1	20	351	370	351	373	0.94
6	14	0.0019	0.16	13.4	1.3	2	22	383	403	382	407	0.92
7	14	0.21	17	7.0	3.0	1	23	415	438	415	438	0.94
8	14	6.5e-05	0.0054	18.0	0.2	1	23	444	467	444	467	0.95
9	14	5.2e-06	0.00044	21.4	3.1	2	23	480	501	479	501	0.97
10	14	0.00061	0.051	14.9	0.1	1	23	507	530	507	530	0.96
11	14	0.019	1.6	10.2	2.3	1	23	548	571	548	571	0.96
12	14	4.1e-06	0.00034	21.8	1.0	1	23	577	600	577	600	0.93
13	14	2.5e-08	2.1e-06	28.8	0.7	1	23	608	630	608	630	0.99
14	14	0.012	0.97	10.9	1.0	1	23	637	660	637	660	0.94

Sequence Information

Coding Sequence: ATGTTGCTGCTGGCCTGCAGAAGAGGTCCCAGCTTTCCAATGGTAGTCTCtctaaatataaacaacttctCCCCGTTAGTACCTCAAGTACCTGCACACGGAGGGGCGTCTCCGAGCGTGCTGGGTGTGCCAAGCTCGTCTCTGCAGCTGCGCAAGCTTTGCCACCACTGCGCAGCGAAGCGTACGGCTATTGCGGTCCTACCTGAGCTCTGCTCACGAGAAGTGGAGCTGGTGGACATCGCGCCGCAAGCGGAGCCGCCGGGCTCCGACGACGCCCCGCGGGTCTCCGCCGAGCCTGTCTTCTTTGAGGTTGGAGATGAGTTTAAAAACGCTATCAAAGTCGAAGATTTGCCTGACGAATACTATTCCGATGCGGATGTCGATCAAGTACAAGAAACTGAGACTTCTGAGACAGTAAAGAAGGAATATACTGAGTTGGAAGAGAAGCTAGTCAAAAAGGAAGCAGCGACAAAGATGTCCTCTGCCAAAAAGAGGGGTCGATCTGGGTCGTCGGTCCCCTTGTCGACGGCGAAGAAAAAGAAGACTGCGACTAAGAAGAAAAAGAGCGTCGACTTTACAACTGTAACATCGAAACCTGTCCGCAAGAGGTCCACTCACTGGACGATCCGCTGGGCGACCAAcgagcgagcgagacagctgCATGCGGGGGAGCGAGCGAGCGAGACGGGGGACTTCCCCTGCGAGCGGTGCGGCCGCCGGACCTTCGCCGACGAAGCGGAGCGGGCGCAGCATGTCGCCGCGAAGCATAGCGAAAGTGCGGGAGCGTTTGAATGCGACATCTGCGGCTACAGATTTGGCACTAAACCCGAGTTGGAACGACACATCGTGGCCCATTGCCGCTTCTACAGATGCCCCCGGTGCCCCTGGGAGACCAGGGACCTGGGGCACATGCGGGGGCACGCGGGGACCCACACCAAGGCCAGGGCCGCACTGGGGACGAAGGAGGAGAAAGAACGGCCGTGTCAGCGGTGCAAGGAAAGCTTCCCGTCGAGTGCGTCACTGCGCGCACACAAGTCCCGCTGCAGTACGTACAAGTGCGCGCAATGTGGACGCGCCTTCCGCGATCGCAGCGCATACTTCAAGCACACTCCCGTGCATAAGGAGGCTAATTCTAAGGACAAGCTTTACTGTCAGGTGTGCGACCGGCAGTTCACAAGTCCCCAGTGGTTCAAGACGCACTTTCGTACGAGTCTCAAGCACGTCTCGCGGGACACTTTCCAACACGAGTGCCCGCACTGCCAACTACGGTTCCACATCGCCCAGCGACTGAAGGAACACATCGCCGTGAAGCATCTAAACAGAGGACTCTACGCCTGTGATATGTGCCCGAAAAGCTATACagTGAACGTAAGTCTGCGCAAACATCGCGCCCGGGTCCATAACATCGGCTCCGTCCGAGCGCCGGCGCGGGACAAAGTGTGCGACCACTGCGGGAAGGCTTTCACGTCCAACCATCTCCTTAACAACCACGTGCGTCTCCACACGGGCGAGAAGCCGTTCAAGTGTCCCCTGTGCCCCGCCGCTTTCGCTCAGAACGGCACCCTGTATATGCATACGCTGAGCGTTCACAGGAAGAAGCTGAGCAAAGATGGCGCTGGCGATAATACCGAGGACGCCCCTTACCAATGCGAGGAGTGCAGCAAAGGCTTCTGGTCTAGTTCCCAGCAGAGGGCCCACCATAAGCTCTTTCACCTCAAACAAAGCAACTTCACCTGCGAAGTGTGCAATAAGATGTTCGCGTCTTCCAGTCACCTCAAGGACCACTTAGCGGGCCGGCACGGCGTGCTTTACAGTGACAGCTTCAAGTGCGACACTTGCGGGAAGCGGTTCAACACCCCTTCAGCGCTCCGCGTCCACATCAAGACCCACTCGGCCGAGACCAGTCTCCACAAATGCCGCGCCTGCGACGCCGCCTTCCGCAACCCCGGGCAGCTGTACGTGCATTTTAAGCTGAAGCATTTGAAGCTAAAAAGGGGCGACAAAGTTAGCGTTAGGAACATTAGCAACCCGGAGAGAGAGCTGATTGTTAATGGAAAACCTCAGTAA
Protein Sequence: MLLLACRRGPSFPMVVSLNINNFSPLVPQVPAHGGASPSVLGVPSSSLQLRKLCHHCAAKRTAIAVLPELCSREVELVDIAPQAEPPGSDDAPRVSAEPVFFEVGDEFKNAIKVEDLPDEYYSDADVDQVQETETSETVKKEYTELEEKLVKKEAATKMSSAKKRGRSGSSVPLSTAKKKKTATKKKKSVDFTTVTSKPVRKRSTHWTIRWATNERARQLHAGERASETGDFPCERCGRRTFADEAERAQHVAAKHSESAGAFECDICGYRFGTKPELERHIVAHCRFYRCPRCPWETRDLGHMRGHAGTHTKARAALGTKEEKERPCQRCKESFPSSASLRAHKSRCSTYKCAQCGRAFRDRSAYFKHTPVHKEANSKDKLYCQVCDRQFTSPQWFKTHFRTSLKHVSRDTFQHECPHCQLRFHIAQRLKEHIAVKHLNRGLYACDMCPKSYTVNVSLRKHRARVHNIGSVRAPARDKVCDHCGKAFTSNHLLNNHVRLHTGEKPFKCPLCPAAFAQNGTLYMHTLSVHRKKLSKDGAGDNTEDAPYQCEECSKGFWSSSQQRAHHKLFHLKQSNFTCEVCNKMFASSSHLKDHLAGRHGVLYSDSFKCDTCGKRFNTPSALRVHIKTHSAETSLHKCRACDAAFRNPGQLYVHFKLKHLKLKRGDKVSVRNISNPERELIVNGKPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01545949;
90% Identity: -
80% Identity: -