Basic Information

Insect: Yponomeuta evonymella
Gene Symbol: -
Assembly: GCA_963969515.1
Location: OZ018362.1:457852-461219[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.13 10 7.7 1.2 1 23 163 185 163 185 0.95

2 21 3.2e-05 0.0026 19.0 2.4 2 23 192 214 191 214 0.92

3 21 1.2e-05 0.00096 20.4 5.2 1 23 220 242 220 242 0.97

4 21 3.7e-06 0.00031 21.9 0.9 1 23 248 270 248 270 0.98

5 21 4.8e-05 0.004 18.4 0.3 1 23 276 298 276 298 0.98

6 21 2.6e-05 0.0021 19.3 0.4 1 23 304 326 304 326 0.91

7 21 0.61 51 5.5 6.9 1 23 332 355 332 355 0.92

8 21 0.65 54 5.4 3.4 3 23 392 411 390 411 0.95

9 21 0.00014 0.011 17.0 1.3 1 23 417 440 417 440 0.96

10 21 0.00027 0.022 16.1 8.9 1 23 446 468 446 468 0.96

11 21 5.7e-05 0.0047 18.2 0.5 1 23 474 496 474 496 0.98

12 21 2.9e-05 0.0024 19.1 0.1 1 23 502 524 502 524 0.97

13 21 0.061 5.1 8.6 0.1 6 22 534 550 533 550 0.94

14 21 5 4.2e+02 2.6 0.0 2 20 584 602 584 606 0.75

15 21 0.15 12 7.4 1.2 1 23 611 632 611 632 0.96

16 21 0.0015 0.13 13.7 0.3 3 23 777 798 776 798 0.96

17 21 6.6e-05 0.0055 18.0 1.6 1 23 804 826 804 826 0.97

18 21 3.5e-06 0.00029 22.0 1.1 1 23 832 854 832 854 0.98

19 21 0.023 1.9 10.0 0.5 1 23 860 882 860 882 0.92

20 21 0.00082 0.068 14.5 2.7 1 23 888 910 888 910 0.98

21 21 0.00023 0.019 16.3 2.2 1 23 915 938 915 938 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.13	10	7.7	1.2	1	23	163	185	163	185	0.95
2	21	3.2e-05	0.0026	19.0	2.4	2	23	192	214	191	214	0.92
3	21	1.2e-05	0.00096	20.4	5.2	1	23	220	242	220	242	0.97
4	21	3.7e-06	0.00031	21.9	0.9	1	23	248	270	248	270	0.98
5	21	4.8e-05	0.004	18.4	0.3	1	23	276	298	276	298	0.98
6	21	2.6e-05	0.0021	19.3	0.4	1	23	304	326	304	326	0.91
7	21	0.61	51	5.5	6.9	1	23	332	355	332	355	0.92
8	21	0.65	54	5.4	3.4	3	23	392	411	390	411	0.95
9	21	0.00014	0.011	17.0	1.3	1	23	417	440	417	440	0.96
10	21	0.00027	0.022	16.1	8.9	1	23	446	468	446	468	0.96
11	21	5.7e-05	0.0047	18.2	0.5	1	23	474	496	474	496	0.98
12	21	2.9e-05	0.0024	19.1	0.1	1	23	502	524	502	524	0.97
13	21	0.061	5.1	8.6	0.1	6	22	534	550	533	550	0.94
14	21	5	4.2e+02	2.6	0.0	2	20	584	602	584	606	0.75
15	21	0.15	12	7.4	1.2	1	23	611	632	611	632	0.96
16	21	0.0015	0.13	13.7	0.3	3	23	777	798	776	798	0.96
17	21	6.6e-05	0.0055	18.0	1.6	1	23	804	826	804	826	0.97
18	21	3.5e-06	0.00029	22.0	1.1	1	23	832	854	832	854	0.98
19	21	0.023	1.9	10.0	0.5	1	23	860	882	860	882	0.92
20	21	0.00082	0.068	14.5	2.7	1	23	888	910	888	910	0.98
21	21	0.00023	0.019	16.3	2.2	1	23	915	938	915	938	0.95

Sequence Information

Coding Sequence: ATGAGAGCAGTTGTTTGTTGCAGGTGGGATGCCTGCTGGGGTTTTGACAAATTCCTCGCGGAGCGCAAGGCAAAAACCGAAGACAATCTGCAACAAGCAACGAGAAGCTCGGTGCTGGAATCTATTACAGACGACGTCTCATATGAAGGAAAAGAGGATGCTGATACAGACCTAGAGGACGATCAGCCGCTTTCCAGCATCGCGGCTGAGAAACTAAAGACCGTTGCTTATGAGAAGTTTTACAATGCCTTGCTAAACTTTAGGGACCATTACGTCACTAAACATGAACTGGAGAAGTGTGCCTACCCTGATTTTACTGAATCGAGCGATTCCGAGACCATAGAAAGTGTACCCAATGATGGTGAAAATTCAGGACTGGACAGATTTGACGATTTGACTACTAAAAACATGCGGTGTGACCGGATGGACGAAGAGACGAGAAAGGAGATAAGTGAAGCTCAGACCAAGATAAATggaaaattgtattttgtgtGCAGCATTTGCGGCAAGCGGCTCGGCTCTCGTCAGACTTATGTGTTCCATAAACGGACGCACACAGGAGAAAGACCCTGTGTGTGCCACTTATGCGGCAAACGGTTTACGGTACCCAGTGGTTTACAACGGCATCTAACAGAAACACATGAGCGCGCGAAAAGACACTCATGTCATTTATGCAGTAAAAACTTCGCCAACTCACAAAATCTAAAACAGCACATGCGAATTCACACGGGAGAGAAACCCTTCGTTTGCGCACAGTGTGGCAAGCGTTTCGCCCAGAGCGGGTCGTTGCACGTCCACTTGAAAACTCACACAGAAGTGTTCCCTTTCCAATGTGCAGAATGTGGAGCGAAGTTTCGAGTGAGATCAGGCTTAGCGAGGCACAGGTTGAAGCATACAGGCGAGCGGCCCCACGCTTGCccggtctgcggcaaagctttCAGACAGAGACACGAGTTGTCTGCTCACGAGGCAGCCCACTCCTCGACCGCGCCCTACAGGTGCGCCCACTGCGCCGCTGCCTTCCGACAGAGGCGGACCTTGAGGCATCACTGCAAGAAGATGCACAACAACACTGAAGCCagAGAAGAGCCCGCTAATCCGGACACAACGAAACGAGCCACAGAGACCGAACAGCTTTTGGAAGTTACCGTCGACGAgaacaaatacatcatctgcgaattTTGTCGTAAGTGCGTCAGCGCGCACTCTTGGAAAAGACACGTCCGGTCCCATGTGGACGACAGACGCCACCGCTGCCACCTGTGCGGACTCGGCTTCAACGAGAGCGGAAACCTGGCGCGACACGTGCGGGCCAAGCACCAGAAGGAAAGACCGCACGTGTGTTCACATTGTCACAAGACTTTCACTCGACTTGACCACCTCAAAGACCACTTGTCTTTGCATTCCGACGCCAGAGAATTCACCTGTGATACCTGTGGCCAATCATTTAAGTCGGGAAGCGCGCTGCGCATGCACGGAAAGATGCACGATACTAACACCAAATTTTCCTGCCTGGAGTGCGGAGCCCGGTTTAAACGGAGCGGCGAGTTGAGGGCGCACGTCTCTGTCCATACGGGGGAGAAGCCCTTCGTATGTGCGTGTGGGAAAGCCTTCCGTTTGCGCGCGCAGCTCACTGCGCATCACCTTACGCGCGCGAAGATACAAGCTGTAATGGACACGTTCATCGAGATGTCGgacctggtgattgatttcgaGCGACCAGCCGCCGCGGCGGCGGAGGAAGCGCCGTCGTGTCCGTACTGCGGCGCGGTGACGGGCGACCGCGCGGCTCACACGGCGCACTTGGTCGCCGCGCACGCCGAGCTGCTCTTCCACTGCGACGAGTGCGATCAATACGTCGACCGGAAAGACCTCATCCTACACATGACCATGCACGCCGTCCAGTACAGCCTTAACGAGAAAAACGCGCAGCCCACCAGAGAGGATAAACAGAACGAACCGCTGACCGCGGGCGTCCCGCCCCCTGGAGAGGCTGGGACCCCtgtcaaaaaacaaaagaaagttaAGAAAAAAGTCCCCTCAGACGAAGAGATGTTCAAGAAAGATGTAAAACCAGTGAACGCGGATAGCTTTCAGAAGACCAGCGAGACAGAACTAAAAAGCGAAGTACCAGGTAATAATAACATTTCGAAAGAAGCGAGCGACTTCTCAGACCACACGGACACGGAAGATGGATTCGGTCCGCTGCCAGAGTCCGTGTTCGAAGCGATAGAAGACTCGCAAGACAGCCAACCGGAGACCCCGAGTGAATCGAAAGAGActcagaaagaaaacaaaaccaCTACGAAAAACAAATGGGCGCGAGCGTGCCCCTACTGCCAGAAAATCTACACAGCGTCGTCGAGCTACTTCTATCACATTCGGTACAGCCACAAGGGCATCAAGGAGCACGAATGCGATATATGTAAACGTAAATTCGCGACCAAAGCGTCGGTCAAGCAGCACATGGTCACGCACAACGAAGCGCTGCCGTACGAGTGTTCCGAGTGCGGCAAGAAGTTCCGCTCCAAAGCGAGCCTGTACATTCACAGCCAGACGCACGGCTCGGTCAAGAGATTCATCTGCGGGACGTGCGGGAAGGGGTTCCGCTGGAAGCAGCTGATGCTGCGGCACGAGCAGCGGCACGCGGCGGCGCGCAACCACGAGTGCGGGCAGTGCGGGCGCGCCTTCCGCGTGCGCTGCGACATGTTGcggcacgcgcgcacgcacgcggCCGAGGCGCACGCGTGCAGCAAGTGCGGCCGCCAGTTCGCGCAGCTGCGGTATCTCAAGGTGCACATGGACAAGAAGCACTCGGCCGGCAGTATCGCCGCGCCGGTCCACGTCACGCCTCAAGTGCATAGCTAG
Protein Sequence: MRAVVCCRWDACWGFDKFLAERKAKTEDNLQQATRSSVLESITDDVSYEGKEDADTDLEDDQPLSSIAAEKLKTVAYEKFYNALLNFRDHYVTKHELEKCAYPDFTESSDSETIESVPNDGENSGLDRFDDLTTKNMRCDRMDEETRKEISEAQTKINGKLYFVCSICGKRLGSRQTYVFHKRTHTGERPCVCHLCGKRFTVPSGLQRHLTETHERAKRHSCHLCSKNFANSQNLKQHMRIHTGEKPFVCAQCGKRFAQSGSLHVHLKTHTEVFPFQCAECGAKFRVRSGLARHRLKHTGERPHACPVCGKAFRQRHELSAHEAAHSSTAPYRCAHCAAAFRQRRTLRHHCKKMHNNTEAREEPANPDTTKRATETEQLLEVTVDENKYIICEFCRKCVSAHSWKRHVRSHVDDRRHRCHLCGLGFNESGNLARHVRAKHQKERPHVCSHCHKTFTRLDHLKDHLSLHSDAREFTCDTCGQSFKSGSALRMHGKMHDTNTKFSCLECGARFKRSGELRAHVSVHTGEKPFVCACGKAFRLRAQLTAHHLTRAKIQAVMDTFIEMSDLVIDFERPAAAAAEEAPSCPYCGAVTGDRAAHTAHLVAAHAELLFHCDECDQYVDRKDLILHMTMHAVQYSLNEKNAQPTREDKQNEPLTAGVPPPGEAGTPVKKQKKVKKKVPSDEEMFKKDVKPVNADSFQKTSETELKSEVPGNNNISKEASDFSDHTDTEDGFGPLPESVFEAIEDSQDSQPETPSESKETQKENKTTTKNKWARACPYCQKIYTASSSYFYHIRYSHKGIKEHECDICKRKFATKASVKQHMVTHNEALPYECSECGKKFRSKASLYIHSQTHGSVKRFICGTCGKGFRWKQLMLRHEQRHAAARNHECGQCGRAFRVRCDMLRHARTHAAEAHACSKCGRQFAQLRYLKVHMDKKHSAGSIAAPVHVTPQVHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -