Basic Information

Gene Symbol
kn
Assembly
GCA_963969515.1
Location
OZ018351.1:13431206-13450055[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.6e-142 3.1e-138 462.6 0.0 182 387 12 235 4 239 0.98
2 2 5.3e-08 0.00045 19.6 5.5 421 564 245 405 236 419 0.59

Sequence Information

Coding Sequence
ATGGAGTTGACAACATCACAAACTCCAGCATTAAGatttttcctcaAATTCTTCCTAAAATGCAATCAGAACTGTCTGAAGAACGCTGGCAATCCTCGAGACATGAGGAGGTTTCAGGTGGTGATATCAACGCAAGTGATGGTCGACGGGCCACTACTAGCCATATCAGACAACATGTTCGTTCACAACAACAGCAAACATGGCCGACGCGCCAAGCGTCTAGATCCGACTGAAGGTATAGACGCCGCCACCGAATCACCTTCGGGCCTGTACCCCCCTCTGCCGGTGGCGACTCCGTGCATCAAAGCAATCTCTCCCAGCGAGGGTTGGACCTCGGGCGGGTCAACCGTCATTATAGTTGGGGACAACTTCTTCGATGGGCTGCAGGTTGTGTTTGGAACGATGCTGGTTTGGAGCGAGCTCATAACCTCGCACGCAATAAGGGTGCAAACACCTCCGAGACACATACCGGGCGTGGTGGAAGTCACGTTGTCCTACAAGAGCAAACAGTTCTGCAAGGGTGCCCCTGGGAGATTCGTTTACGTTTCAGCACTCAACGAGCCAACGATAGATTACGGCTTCCAGAGATTGCAGAAACTCATACCGAGGCATCCCGGGGACCCAGAAAAACTACCCAAGGAAATCATCCTCAAGCGAGCGGCGGACCTAGCAGAGGCACTGTACTCGATGCCTCGGAACAACCAACTTGGCTTGGGGGGTCCACGATCACCTCCTTCGAGTATGCCCTTCAATTCATACACTGGCCAGTTGGCAGTCAGTGTTCAAGATGCCGCGGCTAGCCAATGGACTGAAGAGGAGTACGCCAGGAGTGGGGGGTCAGTGTCGCCTAGATACTGCTCCGCGGCGTCCACGCCCCACGCCGCGGCCGCTGCCCCCTCGTACCCCCATCCTCAGCACTACCCCGCGCCGCCTACTTCGCTATTCAACACCACTTCACTGTCTCTAGGCCCGTACCACCCCGCCAACGTGAATGGACACTTATCATCTGACCATCAACACTATAACGCGTATAACACGAAAGATAGCGGGTATTACAGTGAAAGAAACGAGAGCTTTAAAAGCGAGGGCGACTGTCCGGCAAACATTCATCCAAAATgcaatagaaatggtatgaaagGGCCGGAGGGTAAAGAGACTAAGCTAAGGAGCGCCTTCGCAGTTGTCAGACACAGCCAGTCGCCGCCGCGCGTTGCCAATTTCCAACATCACCAGAACTGGCAGCATCTTGCCGTGCAGTGTTAG
Protein Sequence
MELTTSQTPALRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAATESPSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPPSSMPFNSYTGQLAVSVQDAAASQWTEEEYARSGGSVSPRYCSAASTPHAAAAAPSYPHPQHYPAPPTSLFNTTSLSLGPYHPANVNGHLSSDHQHYNAYNTKDSGYYSERNESFKSEGDCPANIHPKCNRNGMKGPEGKETKLRSAFAVVRHSQSPPRVANFQHHQNWQHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00176893;
80% Identity
-