Basic Information

Insect: Yponomeuta cagnagella
Gene Symbol: Bcl11a
Assembly: GCA_947310995.1
Location: OX371288.1:5758836-5765842[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.081 5.8 8.1 0.5 11 23 2 14 2 14 0.93

2 9 3.8e-05 0.0027 18.6 0.8 1 21 20 40 20 41 0.95

3 9 0.054 3.8 8.7 0.3 3 23 77 98 76 98 0.89

4 9 4.7e-05 0.0034 18.3 2.1 1 23 423 445 423 445 0.98

5 9 1.2e-05 0.00086 20.2 2.5 1 23 452 475 452 475 0.94

6 9 3.2 2.3e+02 3.1 3.7 2 23 484 513 483 513 0.74

7 9 0.0021 0.15 13.1 0.1 1 23 521 544 521 544 0.97

8 9 0.032 2.3 9.4 3.3 1 23 550 574 550 574 0.96

9 9 5.8e-06 0.00042 21.2 3.8 1 21 580 600 580 601 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.081	5.8	8.1	0.5	11	23	2	14	2	14	0.93
2	9	3.8e-05	0.0027	18.6	0.8	1	21	20	40	20	41	0.95
3	9	0.054	3.8	8.7	0.3	3	23	77	98	76	98	0.89
4	9	4.7e-05	0.0034	18.3	2.1	1	23	423	445	423	445	0.98
5	9	1.2e-05	0.00086	20.2	2.5	1	23	452	475	452	475	0.94
6	9	3.2	2.3e+02	3.1	3.7	2	23	484	513	483	513	0.74
7	9	0.0021	0.15	13.1	0.1	1	23	521	544	521	544	0.97
8	9	0.032	2.3	9.4	3.3	1	23	550	574	550	574	0.96
9	9	5.8e-06	0.00042	21.2	3.8	1	21	580	600	580	601	0.95

Sequence Information

Coding Sequence: ATGACGGATAAGTCTAACTTGAAGCGGCACATGTTCACACACACCAATGAGAAGTCCTTTAGATGTGACTACTGTGAGAGAGGATTTAAACAGTCAGCCTCGTTCAAGCGTCACATTCTCAATTGTACGCGGCGCGCGCGTGCGATGGCGCAAGAAGCCCAGCTGATGGCCCAAGATGCGCAGGCGCAAGCGGCCGCGACGACGTCCCAGGCTTACAAGCAGAACTTCTGCAGAATTTGCGGCATGCAGTTCCAGTACAAGAGTGCGCTCTTGGAGCATTCTGTTAGGGTACACACAAATAACACAGAAACTCCACCAAAAGAAAAAGACGATAAACCCGGGCTGCTAACTCATCTCATCACAGACAACAAAACTGACGATAGTATCGTGGACGACATACTGTCCGTGGAAGACGAATATTCCCTCGTCAACGTTGCCTCCACCCAGACTCAGAGTGAGATCCTAAATATCGCCAATTATAATAGAACTATTGAAAACGTCGCAGGACAGTGCGAAGACAAAAATGCCGATGCGTTGATGCAACTGGAGTTCCTTAAAGAAATGAACCAACTCCACTCACTCGACGACGAGTTATTCTACAACGATATCGACTTCGACAGCTTCCAAACGAACCAAGTCTTCAACCCTAATGATATAGACTGTAGGTCTCAAGATCGCAACGCAGAAATACTCTTCGACTTTGGCGATTGCACCCGCAGCATCGATCAAGACCTAATGAATGCACTGTATCAAGTAAAAGCGGAACAATTACCGGACGAACTACTAAATGTCCCTACGAAAGAACCGATAGCTTTTCCCACTAGCACAGAGAACTTACTGCCCGATTCAGTGACAGTCAACGAATGCGCAACGATATTTGAAAGCGACGTCGACTTAGAAGCTAGTACGAACTTAGCGATGAATTTGAACCAACTCATTGGTGAAAACAGCGTACATTACGTTTCGACAGAAGATGATGATACTTTCATCATAAGCCTTGACAGTGGTATAGACGCTGAAAAGTTATCGGATCTGTTGAATATTGGAGTCGAAATGATGGAGAGCAATACAATAGACCCATCGAATAATATAGAAGAAGGTAGTTCAGGTAAAGAGAACCACGTTCCTGAAGTAGAACCAATAGTGATAAAGATAGGAAATACACAGGCTGCTGAAAATAAAAAAAATCTGGATTCAGGAAAGCCACAGGAAGAAAAAAATACCAAATTGAAAGAGAAGAAAAAGACTTTGAAAGTAAAGAAGGATTTCGTTTGTAAGACCTGCAGTAAGGTTTTCAAGAAGAGGGATAATTACATGTCGCATTTAGGCACGCACGCGCCCGCGAAGCGCCGGCACGCGTGCGACGTGTGCGGCAAGCGTTTCAGCTACCGCTCCACGCTGAACAAGCACACGGCGCGGCGGCACGAGCCGCGCGTGCTGTCCGCGTACCCGTGCCCGCTCTGCGCCAAGCGGTACCCCGCCAACTGGATGCGTTTCAGCTACCGCTCCACGCTGAACAAGCACACGGCGCGGCGGCACGAGCCGCGCGTGCTGCCCGCGTACCCGTGCCCGCTCTGCGCCAAGCGGTACCCCGCCAACTGGATGCTGAAGAATCACATGGAGCGCGACCACGACCGGCTGACGCCCTACGCCTGTTCTTTCGAGGGCTGCACCCGGAGATTCTACAAGAAGTGCGACCTCGTCATACATAGGAGGTATCACACAGGCGATCGTCCATTCAAATGTGAGATCTGCTCCTATTCTTTCACGCACCGATCTCACCTTAAGCGACACGCGCGCTCCGTCGACTGCACCAAAAAACTAGCCTCTACAAAGCAGAAAACGGACTGTGCCAAACAGAATACGGACTGTACCAACCAGAATACGGACTGTATTAAGCAGAGTGTGGACGATTCTAAACAAAATATTGTAGAATACACCACGCAGGGGATCGTAGACTGTGCTCAGTTAATCTGCGTTGACGGCAGCAGCATTCCCGTCTATTCAGCTGTAAATTTTATGCCGAGCGGCGTGAGTGTCAATCAAAAAGGGGTATCTCTAAGTGTCGTTGGAGGTTCTAAGCCACTGAACGTGGTTTGTACCGAAAAAAAGGCTGTGGAATATACAAAGCAGAAGAGGGGAGAAGTTAATAAAAAGTGTAACGTCAAATCAAAGAACTGCGGCCGTAATAAGCAAACCACTATCGACAATACTGCGCTAAAGATCTCGGAGGATATCAAGAAAAGGAGTGTTGGCATTATAAAGTATAGAACGGCCTGTACCAAGCAAAGTAAAGCGGACTGCACCAAGCAGACAATCGCAAGCAAGTTACTCGTACCAAACTCGCGTTCGTCCGCGAACCGATCACTTCTGAAAACTAACTTGAGCAGTGACGACTGTATCAATCAGCGAAGAAAAGGCCGTGCCATAAACTCGAATATAATTGACCACTTCAAAATTGAGATGCTCGAGAAAGAAAGTTAG
Protein Sequence: MTDKSNLKRHMFTHTNEKSFRCDYCERGFKQSASFKRHILNCTRRARAMAQEAQLMAQDAQAQAAATTSQAYKQNFCRICGMQFQYKSALLEHSVRVHTNNTETPPKEKDDKPGLLTHLITDNKTDDSIVDDILSVEDEYSLVNVASTQTQSEILNIANYNRTIENVAGQCEDKNADALMQLEFLKEMNQLHSLDDELFYNDIDFDSFQTNQVFNPNDIDCRSQDRNAEILFDFGDCTRSIDQDLMNALYQVKAEQLPDELLNVPTKEPIAFPTSTENLLPDSVTVNECATIFESDVDLEASTNLAMNLNQLIGENSVHYVSTEDDDTFIISLDSGIDAEKLSDLLNIGVEMMESNTIDPSNNIEEGSSGKENHVPEVEPIVIKIGNTQAAENKKNLDSGKPQEEKNTKLKEKKKTLKVKKDFVCKTCSKVFKKRDNYMSHLGTHAPAKRRHACDVCGKRFSYRSTLNKHTARRHEPRVLSAYPCPLCAKRYPANWMRFSYRSTLNKHTARRHEPRVLPAYPCPLCAKRYPANWMLKNHMERDHDRLTPYACSFEGCTRRFYKKCDLVIHRRYHTGDRPFKCEICSYSFTHRSHLKRHARSVDCTKKLASTKQKTDCAKQNTDCTNQNTDCIKQSVDDSKQNIVEYTTQGIVDCAQLICVDGSSIPVYSAVNFMPSGVSVNQKGVSLSVVGGSKPLNVVCTEKKAVEYTKQKRGEVNKKCNVKSKNCGRNKQTTIDNTALKISEDIKKRSVGIIKYRTACTKQSKADCTKQTIASKLLVPNSRSSANRSLLKTNLSSDDCINQRRKGRAINSNIIDHFKIEMLEKES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01546879;
90% Identity: iTF_01543197; iTF_01544189; iTF_01546879;
80% Identity: -