Basic Information

Insect: Yponomeuta cagnagella
Gene Symbol: -
Assembly: GCA_947310995.1
Location: OX371297.1:2735403-2737616[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.3e-05 0.003 18.4 0.7 2 23 7 29 6 29 0.95

2 14 0.027 1.9 9.6 0.8 1 23 34 57 34 57 0.93

3 14 0.51 37 5.6 2.6 1 23 64 87 64 87 0.96

4 14 0.0019 0.14 13.2 1.0 2 23 94 116 93 116 0.95

5 14 0.082 5.8 8.1 4.8 1 19 123 141 123 146 0.94

6 14 0.0023 0.16 13.0 1.9 2 23 175 197 174 197 0.94

7 14 1.6 1.2e+02 4.0 1.4 1 23 203 227 203 227 0.89

8 14 0.023 1.7 9.8 2.1 1 23 412 435 412 435 0.96

9 14 0.01 0.72 11.0 1.6 1 23 481 504 481 504 0.94

10 14 7e-05 0.005 17.7 0.1 1 23 520 542 520 542 0.98

11 14 0.005 0.35 11.9 5.4 1 23 567 590 567 590 0.98

12 14 0.00018 0.013 16.4 1.3 1 23 595 618 595 618 0.97

13 14 0.0012 0.082 13.9 0.9 1 23 662 685 662 685 0.94

14 14 0.21 15 6.8 0.4 1 23 692 715 692 715 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.3e-05	0.003	18.4	0.7	2	23	7	29	6	29	0.95
2	14	0.027	1.9	9.6	0.8	1	23	34	57	34	57	0.93
3	14	0.51	37	5.6	2.6	1	23	64	87	64	87	0.96
4	14	0.0019	0.14	13.2	1.0	2	23	94	116	93	116	0.95
5	14	0.082	5.8	8.1	4.8	1	19	123	141	123	146	0.94
6	14	0.0023	0.16	13.0	1.9	2	23	175	197	174	197	0.94
7	14	1.6	1.2e+02	4.0	1.4	1	23	203	227	203	227	0.89
8	14	0.023	1.7	9.8	2.1	1	23	412	435	412	435	0.96
9	14	0.01	0.72	11.0	1.6	1	23	481	504	481	504	0.94
10	14	7e-05	0.005	17.7	0.1	1	23	520	542	520	542	0.98
11	14	0.005	0.35	11.9	5.4	1	23	567	590	567	590	0.98
12	14	0.00018	0.013	16.4	1.3	1	23	595	618	595	618	0.97
13	14	0.0012	0.082	13.9	0.9	1	23	662	685	662	685	0.94
14	14	0.21	15	6.8	0.4	1	23	692	715	692	715	0.96

Sequence Information

Coding Sequence: ATGGCAGATGAAGTATTGCCCTGCAAATACTGCAACAAAACCTTCAGAACACAAATTGAGTGGAAGGAACATGTATCAACCAACCATGACGTCACAGGCTACCCCTGCGATCTGTGCACAGAGGTATTTTACAAAGAGCATGACTATATTCAACATTTCAATGCCGAACATAAGTCTGACTTCAACCGTCACGTATGTTCCTTCTGTGGAGTATCGTACAAATGGTTTAAGTTCCTCGAACAGCACATCCAGAAGAAACACCAGATCGAGACGTTGAAGCAGTGTGACCGGTGCGGCGAGGAGTTTTACAACTCCATGGCTTTCCGGCAGCATTTGAAGCTAAAACATGTGTCCGGGAAAAAGTTTCACAAATGCATGAAGTGTCACAGAAGTTTTACAGCTAAGAGCTTTCTTCAAATGCATGATAAGTTTGATCACAACAAACGTGGAGCTAAACTGTTCAAGGAGTATGTTCTAGATAATTTAAACTTGGATAGTGAGTCTCTACTTGATAGCACGAAGAAGTGTTCTCAGTGCGATCTGCAGTTCAGCAGTTCAGTTTATTTGTTCAAACATTTTAAACAAGCCCATAATAAGAAAAAGTATTATCAGTGCTGCGAATGCAACGAGGCAGTGTACAACACTAGGGCTGGCTTGAGCATCCATTTGCACTACGAACATGCGATTGCTCGAGAACATAAGTGTGTGAAATGCATGACTGGACACCTGACTCCTCCTAAGACTGATAAAAGAACTAAACCAGAAACGACTATTACAAAAGAAGTAATGAGCCCAAGCTCTCTACCTCCTTGGTCAGATCAGTTTAAGAACAAAGACCTACCAGATGATTTGGAATTGGTTGGAGCTAGTGAGCTAGAGCTTAGTAACCTGCGAAGCAATATTAGAAATCTATTTCATTTGTTAGCTACTGTAACTCCTTCTAAGTTGAAAGCTACCCAAAAGTCTGAAGGGAAAACTGATACGTTTTTTTCCATGAAGAATTTTAAATCGGACGAAATAGGTAAAGATGGCAGGCGGAGATACGAGATTGAGCCGAAAGATTTAAAATTTGAAAAGAGTTTCGATAAAAATCCCACAGATAAGCACGATCGTGGTACAACAAGAAGAAAAAGCGCATCAGTTGCTAAAGAAACGGAAAAACAACCATGTGCCAATGCCAAGGAGACAAGTGCCAACAATGTAAAACAGAAAACGAACAAACCCAAAGTCCATTTTCAGTGTCATAGATGTAAAGATAAATTTTCATTAAGAAAAGCACTGAACGTACACATACTGAATGTTCATGGGTTCAAAGGCTTTCCGAGTAGCAGTCGCAAAGGCGAGGACGAGCACGAGTTATTGAGCAAAAAGTGCGAAGAAATCGAAAAATACTCTGTCGAGAAAATGACCGAAGATAACAAAAACTCAAACACGCCGAAGTACAAATGCAATAGTTGCAATATAGAATTCCATCAACAAGTGCTCTTACTGAATCACCTGACTGAAAGACACACAGCTGACTCGAAACACGTTGCTGACGCGGAAAACAGCGTGGTCTTCAAGTGTCCCGAATGCTACGTAGCTTTCAATACAGAGAATGAACTCAGCGCCCATATGAACGGTCACACGAAACAGGACGAAAACGCCAAGAAAGTCTGCAAAGTTTGCAAGAAACACATGAAAAAGTCAAAGACGATCTACAAGTGCAGAAAGTGCGAGAGAAAGTTCGCGAAACGCAACGTGCTACATCGCCACATAAAGAAGCAACACAAAATGCAGATTTTTAAGTGCGCAAAGTGCAACGCCTCCTTCAAAATAGCTGACAAACTCAAGCAACATATGAAACTGAAACACAACGCCTCAGAAGCGACTACTCTACCCGTCCTGAAGCTGCAGAAGTCAAAGCTATCGCCGATCAAGTTGGATAAACTGCCGAACATCCTGTCGAACATACTAACGAAGAACCTCCTCAACGGTACTCTGCACAACTGCAAGATTTGCAACTCGTATTTTCCGTCCAACGTGCTATTGCAGAGGCATATCCAATGGGAGCACACGAAGAATGTGAACCTGCACAAATGCGGGCAGTGTAACCAGGTGTTGTACAGTGTCGAAGATTTAGACCTCCATACGTCGACTGCACATAGCAGCGAGGGGCCCTTCAAGTGGAAAAAACAAATCGCCTTCAACTATGAACACCAAACTGATATTTGA
Protein Sequence: MADEVLPCKYCNKTFRTQIEWKEHVSTNHDVTGYPCDLCTEVFYKEHDYIQHFNAEHKSDFNRHVCSFCGVSYKWFKFLEQHIQKKHQIETLKQCDRCGEEFYNSMAFRQHLKLKHVSGKKFHKCMKCHRSFTAKSFLQMHDKFDHNKRGAKLFKEYVLDNLNLDSESLLDSTKKCSQCDLQFSSSVYLFKHFKQAHNKKKYYQCCECNEAVYNTRAGLSIHLHYEHAIAREHKCVKCMTGHLTPPKTDKRTKPETTITKEVMSPSSLPPWSDQFKNKDLPDDLELVGASELELSNLRSNIRNLFHLLATVTPSKLKATQKSEGKTDTFFSMKNFKSDEIGKDGRRRYEIEPKDLKFEKSFDKNPTDKHDRGTTRRKSASVAKETEKQPCANAKETSANNVKQKTNKPKVHFQCHRCKDKFSLRKALNVHILNVHGFKGFPSSSRKGEDEHELLSKKCEEIEKYSVEKMTEDNKNSNTPKYKCNSCNIEFHQQVLLLNHLTERHTADSKHVADAENSVVFKCPECYVAFNTENELSAHMNGHTKQDENAKKVCKVCKKHMKKSKTIYKCRKCERKFAKRNVLHRHIKKQHKMQIFKCAKCNASFKIADKLKQHMKLKHNASEATTLPVLKLQKSKLSPIKLDKLPNILSNILTKNLLNGTLHNCKICNSYFPSNVLLQRHIQWEHTKNVNLHKCGQCNQVLYSVEDLDLHTSTAHSSEGPFKWKKQIAFNYEHQTDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01545191;
90% Identity: iTF_01545191; iTF_01546960; iTF_01544283;
80% Identity: -