Ycag014955.1
Basic Information
- Insect
- Yponomeuta cagnagella
- Gene Symbol
- -
- Assembly
- GCA_947310995.1
- Location
- OX371271.1:3793191-3819862[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 8.3 6e+02 1.8 0.5 2 23 269 290 269 290 0.75 2 23 0.27 20 6.5 0.2 1 21 295 315 295 319 0.92 3 23 0.0034 0.24 12.4 2.9 2 23 434 456 433 456 0.94 4 23 0.0031 0.22 12.6 0.0 1 23 462 484 462 484 0.97 5 23 6 4.3e+02 2.2 0.2 1 10 493 502 493 512 0.80 6 23 6 4.3e+02 2.2 0.2 1 10 543 552 543 562 0.80 7 23 6 4.3e+02 2.2 0.2 1 10 618 627 618 637 0.80 8 23 6 4.3e+02 2.2 0.2 1 10 693 702 693 712 0.80 9 23 6 4.3e+02 2.2 0.2 1 10 768 777 768 787 0.80 10 23 6 4.3e+02 2.2 0.2 1 10 843 852 843 862 0.80 11 23 6 4.3e+02 2.2 0.2 1 10 968 977 968 987 0.80 12 23 6 4.3e+02 2.2 0.2 1 10 1043 1052 1043 1062 0.80 13 23 6 4.3e+02 2.2 0.2 1 10 1118 1127 1118 1137 0.80 14 23 6 4.3e+02 2.2 0.2 1 10 1143 1152 1143 1162 0.80 15 23 0.057 4.1 8.6 0.2 1 23 1168 1191 1168 1191 0.88 16 23 0.0003 0.022 15.8 2.0 1 23 1196 1218 1196 1218 0.98 17 23 6.7e-05 0.0048 17.8 0.8 1 23 1224 1246 1224 1246 0.98 18 23 0.0001 0.0073 17.2 3.8 1 23 1252 1274 1252 1274 0.98 19 23 3.1e-06 0.00022 22.0 0.5 1 23 1280 1302 1280 1302 0.98 20 23 0.0033 0.24 12.5 5.0 1 23 1308 1330 1308 1330 0.99 21 23 0.00057 0.04 14.9 1.2 1 22 1336 1357 1336 1357 0.97 22 23 0.0011 0.077 14.0 2.7 1 23 1364 1386 1364 1386 0.98 23 23 4.8e-06 0.00034 21.4 3.5 1 23 1392 1415 1392 1415 0.97
Sequence Information
- Coding Sequence
- ATGGATGTTTTGCTTTATAATTCCGCAGTGTGTAGATTATGTGGTGAGGAAAATGAAAATGGAACATTACTGTATGCTGATCCAGAAAACGAAGAAAATCTGTGTGATTTGATCAATACTTACTTGCCTCTAAAGATTTCTGATGATGGACAGCTTCCACGTACCATATGCCCTGGCTGTACCATCCAAGTTGAAGCTACTGTGGAGTTCCTTAACTTGATAATCAAGGGACAGAAAATCGTTAGAGAGCTCCACAGCAATGAGAAAGCGTACAGCAAATCTCTGCTACAGAAATTGGACATATCAGAAAACGAACTTCCTGAAAAACTGTACTATGAAATAAACACAAGCAATGGGGTCTACCAAGTGGAGCACCCCATGTCGCTCCAGGCCGCTGGATTGGACAAGCCGAAGCGCAAAAGAGGCCGGCCTCCGAAGAAGCCCAAAACTCCAGAGGAGTTGGCTGCAGAAGCCTTGGAGAGAGACAAGGAGCTCGCCAGGATTAAGGCTTCGAGGGAAGCGAATGACAATGAGGAACCTACTGGGAAGCGACGTAGGAAGGCACCAACGAGATTCAGGGAGGCTGTTCAGGGCAAAGAGCTGGAGCGGATACTCAAAGACGAGGGGGTGATAGACCCTGAAGAGGTCGACCCGGACGGGAAACCGGACGAGCCGGGCCGCAAGTCGCCCGTCTGCAAGCTTCCCGAGGTCATCGGCCACCTGGAGACCTCGGGCGAGCCCGTCGTCGTGCTGCAGGGGAAGGGCCGGGGCAGACCCAAAGGCCGCATGCGTCCGACGCGTGAGCAGTGCGCCATATGCGGCATGGAGTTTTCGTGCGTGGGTCGCTATATGTCCCACATCGCACAGCACGGACCCGTCATGTACCAGTGCGGAGAATGCGGCTTGCAGGCTTCCACACGGCTGCTCTTCACACAGCACCAAAGCGACACCGGTCACACCGGGCAGAAAGTGATTCCTCTGAAGAATGAGAAACACGAGATGCCTACAGATTCCGACCCGCTCGCTATCGAGGAAGCCACGGTGCTTCCCGACCTGAACCCGGCGAGTCTCAACCTTATGCCCATCGGCGCTAAGGTCGACAGTGCCGCGAAGGTGGCTGACCTGGAAGTGGACGTCATCAAGGGACTGGGCAATGATAGCAAGAGCGATGGAGACTCGTCCACTGTGGATGTTGAGTCGAGTCCTGTGGCCAAGACTGAAGTTGGGACTAGCGAGAGTGAGGAAACAGCGCGGGCGGGCCCCGCCGCCGCGGGGGGGGCGGGACTTAAGGCCAAGCTCAAGTGCAACCACTGCGACAAGATGTTCAGTAGTCGGCAGAGCAAGTCTATGCACATCAAGGCCCTGCACGCGGGCGAGCGGCCGTACGTGTGTCGCGAGTGCGGTGCCGCCTTCCCCTACCCGCGCTCGCTCGCCATACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACACACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACACACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGGACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACACACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGGACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACACACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGGACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACACACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGGACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACACACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGGACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGGACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACACACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGGACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGCACTAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACACACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGGACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACATACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACACACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTAACACACACACACGCCATCAGCCACCGCCGCACCAACCCCAGCAAGGGGTTCGCCTGCGACCTATGCGGGAAGGTGCTGAACCATCCGTCGTCGGTGGTGTACCACAAGGAGGCGGAGCACGCCGGCAAGCAGTACGTGTGCCTCAAGTGCGGCAAGGGCTTCAAGCATAAGCAGATCCTGCAGCGGCATCAGCTGGTGCACTCGCAGCTGCGCCCCTACACCTGCCAGACGTGCAGCGCCTCGTTCAAGACCAAGCCGAACTTGATAAACCATCAGCTGCTTCACACCGGCATCAAAAAGTACAGCTGCGAAACCTGCAAGCAGAGATTTGCACACAAAACCAGCTTGACGCTCCACATGAGATTGCACACGGGCCTCAAGCCCTACACGTGCGGCGTGTGCACAAAGAGCTTCTCCCAAAAGGGCAACCTGTCGGAGCACGAGCGCATCCACACGGGCGAGAAGCCCTACAAGTGCACTCTCTGCACGCGCGCCTTCACCACCAGCTCGCAGCACCGCCTGCACCTGCGGCGCCACTCCGCCGACCGGCCCTACGAGTGTACGCACTGCGGGAAGAAGTTCCTGTCGCGCGAGTCGTGGCGCGTTCACATGCGTCGCGAGGCGGGCGCGCGTGCGCACCGCTGCGCGCTGTGTCCGCGCGCCTTCTGCGAGCGCTGGGCGCTGCTGAAGCACCAGCGCCGGCACACCGGCGAGCGACCCTTCCGCTGCCCGCACTGCCCGCGCGCCTTCGCAGACTGCTCCAACCTCAACAAGCATAAGAGGCAAGTCCACAAGCAGATCTCACTGCTGGTCTCCGAGAACCAGCGGCAAGCCGTGGAGCCAGCCGGTCAGATCATCATCCAGCCCCAGCCCAGCCCCCAGCTGATCATCCAAGCCGAGGCAAGCGACCTGGTCCTGGAAGACAGCGAACAGATCGTCCTGCAGGAAGCCGGGGAAAGTCTTCCTACATCACCTGAAGACGGGGAGCGGGTCATATATGTCACTTACAACGTGGAGGGTGAAGACTCTGGATTCCATATACTGGATGCGAACGCTGAGGAGGAGGAGCCCCAGTCCCCGGAGGCGGCGCCCCCGAGCCCGCTGCCGCCGGGCCGCTCGCTGCTGCTGCCCGGTGACGACGTGACCGCGCCGCGCCGCCGCCGGGACCCCGCCGGGGACCAGAAGACACACATGGCGGTGACGGACGAGGAAGGCAACCCGCTGCACTTTACGATGCAAGACGGCACACGGCTCGCTATCACTTCTGCCGACGGGAAGTCGTTGCAGGTGGTAACGCAAGATGGCCGCACCATTCCGGTTGAGATAAATGGCTACAACGACGAAGAGGTTGCCATGGAAGTAGAGAGCGAGGATACAGTGGAGCAGCAACTGGCGCTGCATAAGACCGAGGAGGCGAGTCCTGAAGCTTCCCCCGTCGCGCATTACTTCACCATCGTCTAG
- Protein Sequence
- MDVLLYNSAVCRLCGEENENGTLLYADPENEENLCDLINTYLPLKISDDGQLPRTICPGCTIQVEATVEFLNLIIKGQKIVRELHSNEKAYSKSLLQKLDISENELPEKLYYEINTSNGVYQVEHPMSLQAAGLDKPKRKRGRPPKKPKTPEELAAEALERDKELARIKASREANDNEEPTGKRRRKAPTRFREAVQGKELERILKDEGVIDPEEVDPDGKPDEPGRKSPVCKLPEVIGHLETSGEPVVVLQGKGRGRPKGRMRPTREQCAICGMEFSCVGRYMSHIAQHGPVMYQCGECGLQASTRLLFTQHQSDTGHTGQKVIPLKNEKHEMPTDSDPLAIEEATVLPDLNPASLNLMPIGAKVDSAAKVADLEVDVIKGLGNDSKSDGDSSTVDVESSPVAKTEVGTSESEETARAGPAAAGGAGLKAKLKCNHCDKMFSSRQSKSMHIKALHAGERPYVCRECGAAFPYPRSLAIHAISHRRTNPSKGFACDLCGKVTHTHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHTHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHTHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHTHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHTHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHTHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHTHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHTHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHIHAISHRRTNPSKGFACDLCGKVTHTHAISHRRTNPSKGFACDLCGKVTHTHAISHRRTNPSKGFACDLCGKVLNHPSSVVYHKEAEHAGKQYVCLKCGKGFKHKQILQRHQLVHSQLRPYTCQTCSASFKTKPNLINHQLLHTGIKKYSCETCKQRFAHKTSLTLHMRLHTGLKPYTCGVCTKSFSQKGNLSEHERIHTGEKPYKCTLCTRAFTTSSQHRLHLRRHSADRPYECTHCGKKFLSRESWRVHMRREAGARAHRCALCPRAFCERWALLKHQRRHTGERPFRCPHCPRAFADCSNLNKHKRQVHKQISLLVSENQRQAVEPAGQIIIQPQPSPQLIIQAEASDLVLEDSEQIVLQEAGESLPTSPEDGERVIYVTYNVEGEDSGFHILDANAEEEEPQSPEAAPPSPLPPGRSLLLPGDDVTAPRRRRDPAGDQKTHMAVTDEEGNPLHFTMQDGTRLAITSADGKSLQVVTQDGRTIPVEINGYNDEEVAMEVESEDTVEQQLALHKTEEASPEASPVAHYFTIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -