Basic Information

Insect: Yponomeuta cagnagella
Gene Symbol: -
Assembly: GCA_947310995.1
Location: OX371283.1:13565287-13581481[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.6 1.2e+02 4.0 0.7 1 23 503 526 503 526 0.93

2 8 0.00015 0.011 16.7 7.1 1 23 539 561 539 561 0.97

3 8 0.00054 0.039 15.0 0.5 1 23 569 591 569 591 0.97

4 8 4.9e-06 0.00035 21.4 0.1 1 23 610 632 610 632 0.98

5 8 2.2e-06 0.00016 22.5 1.5 3 23 640 660 639 660 0.98

6 8 1.5e-06 0.00011 23.0 0.9 1 23 666 689 666 689 0.95

7 8 0.0047 0.34 12.0 0.4 1 22 695 716 695 716 0.97

8 8 0.043 3.1 9.0 3.8 1 21 735 755 735 756 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.6	1.2e+02	4.0	0.7	1	23	503	526	503	526	0.93
2	8	0.00015	0.011	16.7	7.1	1	23	539	561	539	561	0.97
3	8	0.00054	0.039	15.0	0.5	1	23	569	591	569	591	0.97
4	8	4.9e-06	0.00035	21.4	0.1	1	23	610	632	610	632	0.98
5	8	2.2e-06	0.00016	22.5	1.5	3	23	640	660	639	660	0.98
6	8	1.5e-06	0.00011	23.0	0.9	1	23	666	689	666	689	0.95
7	8	0.0047	0.34	12.0	0.4	1	22	695	716	695	716	0.97
8	8	0.043	3.1	9.0	3.8	1	21	735	755	735	756	0.93

Sequence Information

Coding Sequence: ATGGCTGCTGAACTGAAACCTGAGAGCGATTTGGAGAGCTTTTGCCGGGCTTGTCTCATACATTATGACGAGCCCAATGAACTTGTGCAATACACTGAGAAGACTAGAAGACAATTTGTTTACGCCACTGGCTTACAGGTGAAACGCAATGACACATTCCAATTGTGCAAGGAATGCTATGTCAACATCAGAATGACTTGCAAGTTCAAAAAGCAATGCAGGACCTCCGACAAACGATACAAAAATTATCTAGCATTGAAGGAGGCAGGGGAGACCGCTGACTTCCGCTCCTTTTTGAAGAAAACTGATGATACATTTCGATTTCCGTTTATGAATGGCTACAGCACACCAATGCACCAAAAAAATAAAGACGATGACAATGAATCCACTACCACAAGCATCCGAAACTTCATGACGGATATACTGAAGGCTGAGGAGATCCCGGACACGGAAGTGAACATCATCCGGGAAACCATTGAGGAGGAGGCAGATATCCTGGATGACTCACTGGACTCCCAATGGCTGCAGGATGACGTGTCAATTGACACAGACTTCCAACTGGACTTTAGTTTCAGTCCATTTGCCACGCCGCGCTCAGTCGCTAACGAACGTGGTTCCTCGACGAAGAAAGATGACACTCATCATGTTTATGCACCAATCAGTTTCAGTCCATTCGCCACGCCGCGCTCAGTCGCCAACGATCATTGTTACTCGACGAAGAAAGATGACACTCAACATGTTTATGCACCAATCAGTCCGTTCACAACACCTCGGCCTGCTGACAAAGAAGACTCGTATTCACCAAACACACAACACAAACAACACGTCTATGTGACATCGAAGAAATTTGTGAACGTTCAAGGCAAAGATCAGGGAAAATCCGAAGCTTTGATTCCAGATTCTATTGACAAGAACTTGGAGAAAGCCTTGCGGAACGATGCCCAGGAGTTTGCTTTGGACGATTTATTGGTCTCGCCTGCTCCCGGAACTCCGCTAGTGTCCACGCCGACAATCAACGACATTCTATTCGGTAAAGACATAAACTGTGACGGTGATATCCAGTCCAGCGCCCTGCCCAAAGTCGGGCAGTGTATAGACCCCTTCAATGATGTCAGAGGTGATGACGACATAGAACTTTTCAAGGATGCTAGAATGAACTTTTACGGAAGCGCTAATGTCGCAGAAAGTAATGAAATGGACATAAGTCAAACTTTCGAGATTGACATCAAAGTGGAAGAAGTTAAAGCAGATACGGTTGATACTAATAAACAGGAAGTACCTGTTCCTTTTAATGAAGAGATGAAGATCGAAGGAGAACCAGTGCCAGTATCCAAAGACACGCCCTTGGTGTTTCGACCAACTGTTGACCCAAACTTGCGACCCAGTAAAGACAAGTTTCAGCCATCAGTAGAACTCGTTTACGAAAAAAGTGAAAATAAAAATAAGGAAAACGAAATCGCAACTGAAAACTCATCAAATGTCGGAGAACATGCGCCGAAATCCAAGTTTTATTGCGACATCTGTAAATTTGATACAGAGAACTACACAAATACAGTTCTCCACTACCGAGCAGTTCACAAAGTGGCTCTTAAATCCAAATTGAAAGAGATCGCACACGTATGTGAAGTGTGCGGCAAATCGTTCAGGCATTACGGGAATTATTATCATCATCTGAAAAAGCATGAGAATCCGGAGCGAGGCACCTTCATTTGCGATATTTGCAACCGTAAATTCACGGCGCGCTCGAAAATTTTATTGCACATGAGGGCACACATGACAAAGCAGATAGGGACAAAGAAAAAACCCCTCGATCGTACTAAAAAGGAATACATTTGCGCCATATGCGGGGCGCGAAGCAGCGACTCCTCCAACCTAAAGGTGCACATACGTCGGCACAACAAAAACTACACCGTGTTCTGCAAGGAATGCAACAAGGGCTTCGTCCGGAACCAGGACTTGGAGAATCACATGAGAAAACACACGGCGGAGAAGCCCTTCGCATGTGCAGAATGCGATAAGAGGTTCAACCGGCGGGATACACTCACGACGCACATGCGAGCTAAGCACACAGGCGAAAAACCCTTCGAATGCGAATTCTGTCACGCCAAATTCGCTAGGGGAAACCAACTCACGATACACGTAAGAACAAGTCGAACATGCAAGAAAATTAGGGAAGATGATGTACAAGACATAAGCAAAGCGTTCGAATGCGAATTTTGCCACGCAACATTCAAGTATCCCTGTCATCTTTCGCTGCACGTACTGAAGAGTAAAAAATGTATGAGAGTTAGGTGCGGTATTCCAGAAAGGCCAAAGAGACAGCATAGGAAAAATAAAAAAGGCAACAAAGGCAGAGATAACAGTAGAGAAACGATCCTTGGCGGAATATTGTCGAAGTGA
Protein Sequence: MAAELKPESDLESFCRACLIHYDEPNELVQYTEKTRRQFVYATGLQVKRNDTFQLCKECYVNIRMTCKFKKQCRTSDKRYKNYLALKEAGETADFRSFLKKTDDTFRFPFMNGYSTPMHQKNKDDDNESTTTSIRNFMTDILKAEEIPDTEVNIIRETIEEEADILDDSLDSQWLQDDVSIDTDFQLDFSFSPFATPRSVANERGSSTKKDDTHHVYAPISFSPFATPRSVANDHCYSTKKDDTQHVYAPISPFTTPRPADKEDSYSPNTQHKQHVYVTSKKFVNVQGKDQGKSEALIPDSIDKNLEKALRNDAQEFALDDLLVSPAPGTPLVSTPTINDILFGKDINCDGDIQSSALPKVGQCIDPFNDVRGDDDIELFKDARMNFYGSANVAESNEMDISQTFEIDIKVEEVKADTVDTNKQEVPVPFNEEMKIEGEPVPVSKDTPLVFRPTVDPNLRPSKDKFQPSVELVYEKSENKNKENEIATENSSNVGEHAPKSKFYCDICKFDTENYTNTVLHYRAVHKVALKSKLKEIAHVCEVCGKSFRHYGNYYHHLKKHENPERGTFICDICNRKFTARSKILLHMRAHMTKQIGTKKKPLDRTKKEYICAICGARSSDSSNLKVHIRRHNKNYTVFCKECNKGFVRNQDLENHMRKHTAEKPFACAECDKRFNRRDTLTTHMRAKHTGEKPFECEFCHAKFARGNQLTIHVRTSRTCKKIREDDVQDISKAFECEFCHATFKYPCHLSLHVLKSKKCMRVRCGIPERPKRQHRKNKKGNKGRDNSRETILGGILSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01546047;
90% Identity: iTF_01546938;
80% Identity: -