Basic Information

Insect: Yponomeuta cagnagella
Gene Symbol: -
Assembly: GCA_947310995.1
Location: OX371279.1:9129179-9151640[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00021 0.015 16.3 0.9 1 23 135 157 135 157 0.95

2 11 3.6e-05 0.0026 18.7 0.5 1 23 163 185 163 185 0.97

3 11 2.2e-05 0.0016 19.3 1.0 1 23 286 308 286 308 0.98

4 11 2.9 2.1e+02 3.2 0.3 2 23 315 337 314 337 0.89

5 11 0.00059 0.042 14.8 0.2 3 23 402 423 400 423 0.90

6 11 0.0053 0.38 11.8 0.2 1 23 438 460 438 460 0.96

7 11 3.5e-05 0.0025 18.7 0.2 1 23 485 507 485 507 0.98

8 11 0.0007 0.05 14.6 0.2 1 23 513 535 513 535 0.97

9 11 0.00039 0.028 15.4 0.3 1 23 541 563 541 564 0.95

10 11 0.0042 0.3 12.2 1.7 1 23 577 599 577 599 0.96

11 11 0.0043 0.3 12.1 0.1 1 20 750 769 750 772 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00021	0.015	16.3	0.9	1	23	135	157	135	157	0.95
2	11	3.6e-05	0.0026	18.7	0.5	1	23	163	185	163	185	0.97
3	11	2.2e-05	0.0016	19.3	1.0	1	23	286	308	286	308	0.98
4	11	2.9	2.1e+02	3.2	0.3	2	23	315	337	314	337	0.89
5	11	0.00059	0.042	14.8	0.2	3	23	402	423	400	423	0.90
6	11	0.0053	0.38	11.8	0.2	1	23	438	460	438	460	0.96
7	11	3.5e-05	0.0025	18.7	0.2	1	23	485	507	485	507	0.98
8	11	0.0007	0.05	14.6	0.2	1	23	513	535	513	535	0.97
9	11	0.00039	0.028	15.4	0.3	1	23	541	563	541	564	0.95
10	11	0.0042	0.3	12.2	1.7	1	23	577	599	577	599	0.96
11	11	0.0043	0.3	12.1	0.1	1	20	750	769	750	772	0.93

Sequence Information

Coding Sequence: ATGGATGCTGAAACATTTAGCCTCCGCTGGGAGGAGGAGGAGAGGGCACGGACTCCTGGTGTGGCAGCATGCGAGGAAGTCATTTACAATACGCAGTCTACTTCCTATTCTAACATAGAGGGCGAAACAATAATACCAGATACAGACCAGATGGCAGCTGAAAATCTGATGTACCTGGCCCAGGACATCAGCTACACGGAGGTGGCCGAGCTCGTGGATGACCAGGGAGTTGAATGTGTCACCGAGGAAGTCATCACGGATGACTGGGTGGTGCCAGGAGGCCAGGAGAGGGTGGAAGTACCACTGGAACAACTAACACAGCCCGTACCCGACATGAAGGATGACAATGATATTGATGTGCCATTGCCAACAGATCAAGACGAGTACACGGCGATGCGTCCCTACCCGTGCGACTTTTGCTCGCGTCGCTTCCGCAAGAAGAACTCCCTCGTGAACCACATGGTGGCGCACCAGAGCGACCGCCCGCACGTCTGCAACCTCTGCGGCGTCCGCTACGTGCGCAAGGCTGACCTCATGAACCATCTGAAGGTGCACGCTTTCGTCCCGGAGCACCCCGACGAGATGGAGTATGACGATGTGCTAGAAAATCATCTGGTCGTCAAATCCAAAAAGAAACGGGGACGACGAAAAAAGCCAATTCCAAAGCCGCCAAAGGAGAACGGCGAGATGTGGGAGAACATGACGTCGGCGCGTACGCAGCAGTGGTCGCGCAAACGCACGGCGGCCGAGCCTCGCGCCTCGCTCCCGCCGCCCTCGCCGCCCTCCCCGCCCTCCTCGCCCTCGCCCGCCGAGCCGCCCTCCCCGCCCCCGCCGCCCGCTGACCCGCGCCGCCCTTTTACGTGCAAACACTGCGGCATCGGCTTCGCGCGCGAGAAGGCGCTGCAGTCGCATTCTAGGGTGCACGGGGGGGAGTCCCCGCTGGAGTGCGGCGCGTGCGGCGAGCTGTGCTGGTCGCGGGAGGCGCTGGCCTCTCACCAGCGGCGCCGCCATCCGAACATGCCCGCGCCCGCGCCGTCCGCGCCCGACTACCGCGCCCCTGACTCCGGTGAGCCACTCGCCTTATTCGAAGACGAAGATGACGACGACATCGATTACCGTCTCTCCCCATCCGCGGAAAGCGGCGGGGCGGGCGGCGGCGGCGAGCGGCCGATATATGACACGGTGCGAGGGCCGGAGTTGTTCTGCCAACACTGCGGCGTGGCTTTCCAACGGGCAGACCTACTGAGGCGCCACGTAGCAGCCGCTCACAGCTACAAGCGGCACGACAGCGCGGGCTCGTCGGGCTGCGAGCACACGTGCGGCGTGTGCGGCGAGACCTGCGCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGACACGCCGCGCCCGACCACAGAGTAAAAAGCAGAAGTAAGAGTCGGATCAACACAACGTTAAGCAATTCAAGACAGTTCCCCTGTAGAGAATGCGGCAAGGTGTTTGGCTCGCGGTCGTCACAACAGATTCACGTGCGGATCCACACGGGCGAGCGGCCCTACGCGTGTCGGTTCTGCTGGAAGGCATTCGCGGACGGCGGCACGCTTAGGAAACATGAGCGAATACACACTGGCGAGAAGCCGTACGCGTGCGCGGTGTGCCCGCGCGCGTTCAACCAGCGAGTGGTGCTGCGCGAGCACGTGCGCTCGCACCACTCCGCGCCCGACCGCCGCGCCAACGGAGGCCCGTCATACTGCTGTGTGGTGTGCGGGCGGACGCTGCACTCGAGTTCGGAGCTGGTCCAGCATCTCATACAGCACTGCGACGCAAATACGGCGCTGCGTCGGCAGCCGCAGTCGGGCCCGCGCAAGTACAAGCGGCGAAAAAAGCAGAAGCCGGAGCTCTCGCCGTCGTCGGAGAAGCCCGAGTGGTCCCCCCCGCCGTCCCCGCCGCCCGCGCCCCCCCCGCCGCGCGCGCGCCGCCGCCGCGCCGCCTCGCCGCCGCCGCGCCCGCGCATGATACACACCGCCGAGGACACTAGGCCCAGGACCAAGCAGGTTCGCAACCGGCGGCCGCCGCGGCACCCGGCGGACGACCTGCGGGCCATCCGGCCGCACCTGCCGCAGTCCCCCCCGCCGCCGCCCCGCGCCGAAGCCGCCCTCGCCCCCACCCCCGCCCCCGTTAAGAAGGAGATCGTCCCCAAGAAGGAGACCATTGTGCCTAAGAGCGAGCCAAGCGACGAAGAGGAGCCCGAACGCAGCATGACGCCGTTCCGCTGCGAGATGTGCGACCTTCGCTTCGACAAGCGCGATGACCTCTTGATGCACGTACCCGTGCACATATGA
Protein Sequence: MDAETFSLRWEEEERARTPGVAACEEVIYNTQSTSYSNIEGETIIPDTDQMAAENLMYLAQDISYTEVAELVDDQGVECVTEEVITDDWVVPGGQERVEVPLEQLTQPVPDMKDDNDIDVPLPTDQDEYTAMRPYPCDFCSRRFRKKNSLVNHMVAHQSDRPHVCNLCGVRYVRKADLMNHLKVHAFVPEHPDEMEYDDVLENHLVVKSKKKRGRRKKPIPKPPKENGEMWENMTSARTQQWSRKRTAAEPRASLPPPSPPSPPSSPSPAEPPSPPPPPADPRRPFTCKHCGIGFAREKALQSHSRVHGGESPLECGACGELCWSREALASHQRRRHPNMPAPAPSAPDYRAPDSGEPLALFEDEDDDDIDYRLSPSAESGGAGGGGERPIYDTVRGPELFCQHCGVAFQRADLLRRHVAAAHSYKRHDSAGSSGCEHTCGVCGETCADALQLLAHAERHAAPDHRVKSRSKSRINTTLSNSRQFPCRECGKVFGSRSSQQIHVRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGGPSYCCVVCGRTLHSSSELVQHLIQHCDANTALRRQPQSGPRKYKRRKKQKPELSPSSEKPEWSPPPSPPPAPPPPRARRRRAASPPPRPRMIHTAEDTRPRTKQVRNRRPPRHPADDLRAIRPHLPQSPPPPPRAEAALAPTPAPVKKEIVPKKETIVPKSEPSDEEEPERSMTPFRCEMCDLRFDKRDDLLMHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01544190;
90% Identity: iTF_01544190;
80% Identity: -