Basic Information

Insect: Yponomeuta cagnagella
Gene Symbol: -
Assembly: GCA_947310995.1
Location: OX371295.1:7867562-7869775[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.31 22 6.3 0.1 3 23 13 33 11 33 0.93

2 16 0.014 0.97 10.6 1.7 2 23 56 77 55 77 0.97

3 16 0.0052 0.37 11.9 0.1 1 23 81 103 81 103 0.96

4 16 0.055 3.9 8.7 0.4 1 15 108 122 108 131 0.78

5 16 0.042 3 9.0 0.2 1 23 137 160 137 160 0.93

6 16 0.0031 0.22 12.6 3.4 1 23 167 190 167 190 0.97

7 16 8.4e-06 0.0006 20.7 2.0 2 23 198 219 197 219 0.96

8 16 1e-06 7.2e-05 23.6 2.6 1 23 225 247 225 247 0.98

9 16 0.00026 0.019 15.9 0.8 1 23 250 273 250 273 0.96

10 16 0.023 1.6 9.8 1.0 1 23 345 367 345 367 0.97

11 16 0.34 24 6.2 3.6 1 23 439 461 439 461 0.98

12 16 2.2e-05 0.0016 19.3 0.8 1 23 465 487 465 487 0.98

13 16 0.077 5.5 8.2 0.1 1 23 492 515 492 515 0.93

14 16 0.0029 0.21 12.7 0.4 1 23 521 544 521 544 0.92

15 16 0.00024 0.017 16.1 4.6 1 23 551 574 551 574 0.98

16 16 0.048 3.4 8.8 3.8 2 20 582 600 581 601 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.31	22	6.3	0.1	3	23	13	33	11	33	0.93
2	16	0.014	0.97	10.6	1.7	2	23	56	77	55	77	0.97
3	16	0.0052	0.37	11.9	0.1	1	23	81	103	81	103	0.96
4	16	0.055	3.9	8.7	0.4	1	15	108	122	108	131	0.78
5	16	0.042	3	9.0	0.2	1	23	137	160	137	160	0.93
6	16	0.0031	0.22	12.6	3.4	1	23	167	190	167	190	0.97
7	16	8.4e-06	0.0006	20.7	2.0	2	23	198	219	197	219	0.96
8	16	1e-06	7.2e-05	23.6	2.6	1	23	225	247	225	247	0.98
9	16	0.00026	0.019	15.9	0.8	1	23	250	273	250	273	0.96
10	16	0.023	1.6	9.8	1.0	1	23	345	367	345	367	0.97
11	16	0.34	24	6.2	3.6	1	23	439	461	439	461	0.98
12	16	2.2e-05	0.0016	19.3	0.8	1	23	465	487	465	487	0.98
13	16	0.077	5.5	8.2	0.1	1	23	492	515	492	515	0.93
14	16	0.0029	0.21	12.7	0.4	1	23	521	544	521	544	0.92
15	16	0.00024	0.017	16.1	4.6	1	23	551	574	551	574	0.98
16	16	0.048	3.4	8.8	3.8	2	20	582	600	581	601	0.94

Sequence Information

Coding Sequence: ATGGGCCTTATTAACGTGGACGTTACTGAATCAATTTGCCGATTTTGCTCAGTGCCGTTCACCGACATTAGCCAAATGCAATATCATGTCATTGACCACGGTCTTGAGTTCGATACAAACCAACCAGATGGTGTGCTCCCATTCTCGCTAAACAAAGAGTCGTGGAAGTGCTTGATCTGTCACGAACTCTTCAATAATTTCTTCAAACTCTACGAAcatatgaacatacattaccagcatttcatctgcgcaacgtgcggcaaaggGTACATGTCAGCAACGCGGTTACGAAAACACGCCGAGATTCACATCAGTGGATCTTTTCCCTGCAATCAATGTGGACGTGCTTTTACTATGAGGGCAGCAAGGGACTACCACAAAGCGCACGCTCATGCCAAGGCGCCAAGATACGAATGTCCCGTGTGCAAAATTCGCTTTGATGGTTACTACGCAAGGATGACCCATTTGAACGAGGAGCACAGAGAAAAGGAAGTCACCTACAGCTGCCAGCACTGCGAGTTATGTTTTAAGACTAGCGGTAAAAGAGCTGCACACGTCAGATCGGTCCATTTTCCACCACAACACGGATGTAGATGCCCATCCTGTGAATGGCAGTTCAAAACTCCTTATGAACTCAAGAGGCATATGATAAAACATACGGGAGAGAAGGATTTCCATTGTTCTGTGTGCGGACAATCATTTTCTAGAAACAAAGCATTGAGGATGCACATAAAGACTCACGAAGAGTTCAAGTGTCGATGGTGTGGGGTAGATTTTAAGCTTAACAGTCATTTGGTGGCTCATTTAAAAGGTCAACATCCCGAGATAGGTTCCGCACTCGCGGACGGAACGCAACGCGTTAGGAAGTTAAAAGAGAACGTTTGCGCTCGCACTCTGCAGCGACGACGCAGGCAGGCCAACGTCTTGCCCGAGGAGTCGGAGAAACGCATTGATAAAACTATGATGAGGCGGAATGCCATGATCATCATGGAAAACTCTACGGCCTGGGCTTTCCGCTGGTGGCGCAACGCGTTCTTTTGCTCCTACTGTGACGCCCGATACGTCGATATCAACCCCCTGTGCGAGCACGTCAAAACCCATCTTCACGAACCCCCAACTAAGAAAGTTTTCTCAAAAGTGAGAGAGAACAATATGCTCAAAATTGAAGTCACGGATTTGGCTTGTAGGCTGTGCAACGTCCGCATCGCTGCCATAGAAGTGTTGAAGCAACATTTAATATCTGATCACGGCAAATCTTTTAATACAGATTTCAGTGACGGCGTCTGTCCGTTCAAACTGGACGATCAAAACGATTTCACCTGCCAGATTTGCTATAGCCATTTCATAAATTTCAATCGTATGAACGAACATATGAACTCTCACTACCAAAACTATATTTGCAATGTTTGCGGCAAAGCATTCGTGTCTAAAACTCGCTTCAGAACGCACGTGCAATCTCACGAAGTCGGAGAATTCCCTTGTGGCGAATGCGATGAAGTCTTGAAGACCAGGGCCGCCAGAATGACCCATAGGGTCAAAGTGCACAAGAAAGGACTCCGATATACATGCCCTAGATGTCCGAAAATATTTACGTCTTACTACACGAGAGCTATGCATCTTGTAAGCGGACATTCTGAGCAGAAACGAGAGTATACTTGCGAGATTTGCAATAGGAGCTTTGATACCAGTTGCAAGAGAGCTAAACACATGCGTAAGACTCACCGGCCGCTAGATAGGATACAAGAGTGTCAAAAATGCTCTTGGAGGTGTTCTAGTAAAGCCCTACTTAGGAAGCATGTGTGTTAA
Protein Sequence: MGLINVDVTESICRFCSVPFTDISQMQYHVIDHGLEFDTNQPDGVLPFSLNKESWKCLICHELFNNFFKLYEHMNIHYQHFICATCGKGYMSATRLRKHAEIHISGSFPCNQCGRAFTMRAARDYHKAHAHAKAPRYECPVCKIRFDGYYARMTHLNEEHREKEVTYSCQHCELCFKTSGKRAAHVRSVHFPPQHGCRCPSCEWQFKTPYELKRHMIKHTGEKDFHCSVCGQSFSRNKALRMHIKTHEEFKCRWCGVDFKLNSHLVAHLKGQHPEIGSALADGTQRVRKLKENVCARTLQRRRRQANVLPEESEKRIDKTMMRRNAMIIMENSTAWAFRWWRNAFFCSYCDARYVDINPLCEHVKTHLHEPPTKKVFSKVRENNMLKIEVTDLACRLCNVRIAAIEVLKQHLISDHGKSFNTDFSDGVCPFKLDDQNDFTCQICYSHFINFNRMNEHMNSHYQNYICNVCGKAFVSKTRFRTHVQSHEVGEFPCGECDEVLKTRAARMTHRVKVHKKGLRYTCPRCPKIFTSYYTRAMHLVSGHSEQKREYTCEICNRSFDTSCKRAKHMRKTHRPLDRIQECQKCSWRCSSKALLRKHVC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01545209;
90% Identity: -
80% Identity: -