Basic Information

Insect: Yponomeuta cagnagella
Gene Symbol: -
Assembly: GCA_947310995.1
Location: OX371295.1:7494543-7496585[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 4.9 3.5e+02 2.5 2.2 2 23 47 68 46 68 0.89

2 16 0.0026 0.19 12.8 0.0 2 23 96 118 95 118 0.95

3 16 0.073 5.2 8.3 3.0 1 23 138 161 138 161 0.96

4 16 5.5e-05 0.0039 18.1 1.3 1 23 166 189 166 189 0.95

5 16 0.0029 0.21 12.7 0.9 1 23 194 217 194 217 0.97

6 16 7.8e-05 0.0055 17.6 3.1 2 23 220 242 219 242 0.97

7 16 0.18 13 7.1 3.6 2 21 249 268 249 269 0.94

8 16 5 3.6e+02 2.5 4.2 1 23 321 344 321 344 0.93

9 16 0.41 29 5.9 0.0 2 23 372 394 371 394 0.90

10 16 0.00033 0.023 15.7 0.1 3 23 418 439 417 439 0.97

11 16 9.8e-06 0.0007 20.4 0.5 3 23 446 467 444 467 0.93

12 16 0.0024 0.17 12.9 0.8 3 23 473 493 472 494 0.88

13 16 0.0018 0.13 13.3 3.8 1 23 499 522 499 522 0.94

14 16 3.2e-05 0.0023 18.8 3.3 1 23 526 549 526 549 0.97

15 16 9.8e-05 0.007 17.3 0.4 2 23 556 577 555 577 0.96

16 16 1.7e-05 0.0012 19.7 0.7 1 23 583 605 583 605 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	4.9	3.5e+02	2.5	2.2	2	23	47	68	46	68	0.89
2	16	0.0026	0.19	12.8	0.0	2	23	96	118	95	118	0.95
3	16	0.073	5.2	8.3	3.0	1	23	138	161	138	161	0.96
4	16	5.5e-05	0.0039	18.1	1.3	1	23	166	189	166	189	0.95
5	16	0.0029	0.21	12.7	0.9	1	23	194	217	194	217	0.97
6	16	7.8e-05	0.0055	17.6	3.1	2	23	220	242	219	242	0.97
7	16	0.18	13	7.1	3.6	2	21	249	268	249	269	0.94
8	16	5	3.6e+02	2.5	4.2	1	23	321	344	321	344	0.93
9	16	0.41	29	5.9	0.0	2	23	372	394	371	394	0.90
10	16	0.00033	0.023	15.7	0.1	3	23	418	439	417	439	0.97
11	16	9.8e-06	0.0007	20.4	0.5	3	23	446	467	444	467	0.93
12	16	0.0024	0.17	12.9	0.8	3	23	473	493	472	494	0.88
13	16	0.0018	0.13	13.3	3.8	1	23	499	522	499	522	0.94
14	16	3.2e-05	0.0023	18.8	3.3	1	23	526	549	526	549	0.97
15	16	9.8e-05	0.007	17.3	0.4	2	23	556	577	555	577	0.96
16	16	1.7e-05	0.0012	19.7	0.7	1	23	583	605	583	605	0.97

Sequence Information

Coding Sequence: ATGTGTTTTCATAAAAATACGGGACATGAAGAGCCATCGAGCCTGTATGACCGTAAGACCGCACGGCGTAGGCGCAAAAACTTAGAGATAATATTCAACAACACTTCTATAATACCTTTCAAGTGGCGTAGTCGATTCCTCTGCTTCTATTGCGGGGACGGCCACACAAAGTACGATGAGCTGCGTAAGCATACGCTGTCGCACGGCAAATGTTCCATTCAGGACTACGCGCTGAAGCTCATCAAGGGAAACTATAACGAAGTCAAATTCGACGTCTCCGAGATCTCGTGCGAAGTCTGTAATGAACCGTTCAGCTCTTTAGACGAAATTATTAGTCACTTAAACGTGAAGCATGGGTTTGATTATGACTGTAACATTGAGACTTTGATCCAACAGTTCCGACTGACTGATCACAAATGCGTCTTTTGCAATGAGCAGTTTGACTACTTCCGTTTTCTCATAACGCACATGAACAACGTTCACGGAAGTAACTCGTTCATTTGTGACGACTGTGGCATGGTTTGCAGTAAAAAGAGGGATTTGACCATGCACATCCGTGACAAACATCAGACAGGGGGCTACCCCTGCGAGGAGTGCTCCGAAGTGTTCGAAAGTTTCAACAGACTAAGAAATCATAAGAACAAAACGCACATTTTAAAATGTCACTACTGTGCGCTGACCTTTACCTCGAAAGGACTTTTCAATAAACATTTAAAAACTGAGCATCCGGATGATGGCTCTAGAAAGTGCCCGTACTGCTCCTTGACATGTCATTCGAAGTTCGGCCTTTCCCAGCATATGACCAAGTGCAAAATTAAGAAACTGAAGCACGACAGAGAACCTACTCACCAAACTGAAAAAGAAGAACCTAAGGCTAAGCAGGACGTGCTACAAATAAGGACCAACATACAGTCCGTTGTAAACATGACCACAGCAATACCGTTCAAGTTTTTCACAAAATTCCGTTGCTTCTTCTGCTATGAGAATTTTCAACACATTGACAAGTTGCATGAGCATACGTTAGCCGAACATCCTGTTTGCGATATTAAATGTACCTCAATGAAAAAGTGCAAGGGTGAAAGGGTGTGCGTAAAAGTAAATACAGTGGATTTGAAGTGCAAAATATGCGATATAGCAATCGATGACCTGGACAAAATGATAGACCACATCATCGACGAACACAAAGCCAATTACGATAAATCTCTAACCGGTTGTCTGCTCGCCTTCAAAATCTACAAACATCACGTCCTGTGCCCGGTCTGCAACGAAGAATTCCGATATATCAGCAACGTCTTAAAACACATGAATGTGGAACATACTAACAATAACATCATATGCTCGTTCTGCGGCAAAACTTTTAGGTCCACGGCCAACTTGCGAGCACATCTCTCCTATAACCACAATAAAGACTCTACCTGTGTCCCTTGCGGTATTTCCTTTAAAAACTCCGCCTACCTAGCGAGGCACAAAGCCAAACACCATAACGCTAAAGAGCACAAGTGCCACCTTTGCGACGAAACCTTCGCCTCATCCTACAAGCGACAGAAGCATCTAATACAAGCCCATAACACTGGTCACAAGTGCACTTATTGCGACCGCATGTTCACACGAAACTCGTTCATGATAGACCACGTACGTAGGATACACTACAAGGAGAAAACCAAGCCCTGCTCCGTTTGTGGCGAGAAGTTTTTCGACAATTACCTGCTTCGTATGCACATGGTCAAGCATGACGGGGAGCGAAAGTTCCATTGCGACATCTGCGGGAAGTCTTTCCTTAGGCGCAGTAATTTGGCTGGCCATATGGATGTGCATAAGAAGCAAGGGTTGGTCGTGGATAGGCAGCTTTGTGCTGTTGAATCCAGGGATTAG
Protein Sequence: MCFHKNTGHEEPSSLYDRKTARRRRKNLEIIFNNTSIIPFKWRSRFLCFYCGDGHTKYDELRKHTLSHGKCSIQDYALKLIKGNYNEVKFDVSEISCEVCNEPFSSLDEIISHLNVKHGFDYDCNIETLIQQFRLTDHKCVFCNEQFDYFRFLITHMNNVHGSNSFICDDCGMVCSKKRDLTMHIRDKHQTGGYPCEECSEVFESFNRLRNHKNKTHILKCHYCALTFTSKGLFNKHLKTEHPDDGSRKCPYCSLTCHSKFGLSQHMTKCKIKKLKHDREPTHQTEKEEPKAKQDVLQIRTNIQSVVNMTTAIPFKFFTKFRCFFCYENFQHIDKLHEHTLAEHPVCDIKCTSMKKCKGERVCVKVNTVDLKCKICDIAIDDLDKMIDHIIDEHKANYDKSLTGCLLAFKIYKHHVLCPVCNEEFRYISNVLKHMNVEHTNNNIICSFCGKTFRSTANLRAHLSYNHNKDSTCVPCGISFKNSAYLARHKAKHHNAKEHKCHLCDETFASSYKRQKHLIQAHNTGHKCTYCDRMFTRNSFMIDHVRRIHYKEKTKPCSVCGEKFFDNYLLRMHMVKHDGERKFHCDICGKSFLRRSNLAGHMDVHKKQGLVVDRQLCAVESRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01545082;
90% Identity: iTF_01545082;
80% Identity: -