Ycag013710.1
Basic Information
- Insect
- Yponomeuta cagnagella
- Gene Symbol
- ZNF532
- Assembly
- GCA_947310995.1
- Location
- OX371295.1:7789787-7794373[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.16 11 7.2 0.2 2 23 31 53 30 53 0.95 2 30 0.25 18 6.6 1.8 3 23 77 97 75 97 0.95 3 30 0.00042 0.03 15.3 0.0 1 23 101 124 101 124 0.95 4 30 0.23 17 6.7 0.6 2 22 131 151 131 151 0.94 5 30 0.033 2.4 9.3 1.4 1 23 158 181 158 181 0.93 6 30 2 1.4e+02 3.7 7.8 1 23 188 211 188 211 0.97 7 30 0.00062 0.044 14.8 0.2 2 20 217 235 216 236 0.94 8 30 1.2 85 4.4 0.3 2 22 271 291 270 293 0.88 9 30 0.0016 0.11 13.5 1.7 1 23 359 381 359 381 0.96 10 30 0.0068 0.49 11.5 0.5 1 23 385 408 385 408 0.95 11 30 0.019 1.3 10.1 0.5 1 19 414 432 414 438 0.92 12 30 6.1 4.4e+02 2.2 0.0 2 16 443 456 442 458 0.79 13 30 0.72 51 5.1 0.3 2 22 489 509 488 511 0.89 14 30 0.0011 0.081 14.0 0.1 2 23 537 559 536 559 0.94 15 30 2.2 1.5e+02 3.6 0.2 1 13 580 592 580 602 0.74 16 30 0.0027 0.19 12.8 0.4 1 23 606 628 606 628 0.94 17 30 0.021 1.5 10.0 0.2 5 20 636 651 633 653 0.89 18 30 5.2 3.7e+02 2.4 0.3 3 23 662 683 660 683 0.88 19 30 0.36 25 6.1 0.4 1 23 690 713 690 713 0.95 20 30 0.15 11 7.3 0.5 2 23 718 739 717 739 0.94 21 30 0.00033 0.023 15.6 1.3 1 21 745 765 745 770 0.94 22 30 0.36 25 6.1 0.4 2 23 818 840 817 840 0.94 23 30 0.0047 0.33 12.0 0.1 2 23 867 889 866 889 0.93 24 30 0.052 3.7 8.7 1.7 1 23 910 932 910 932 0.95 25 30 0.0023 0.17 13.0 0.1 1 23 936 958 936 958 0.97 26 30 0.0018 0.13 13.3 0.2 3 21 964 982 962 983 0.92 27 30 2.7 1.9e+02 3.3 0.7 2 20 991 1009 990 1013 0.77 28 30 0.0056 0.4 11.8 0.2 1 23 1020 1043 1020 1043 0.95 29 30 7.5e-05 0.0053 17.7 1.7 2 23 1048 1069 1047 1069 0.97 30 30 5.5e-05 0.0039 18.1 1.4 1 21 1075 1095 1075 1100 0.94
Sequence Information
- Coding Sequence
- ATGTCCCAGGAACACCAAACCTTCTCCCTAGCCATGGTCTACGCCAAACTGCCCAAAACTGAATTCATTAAGATAGACTTAAGCGATCTCAAATGCCGAATCTGCACTCAAAGTTACGACAACGTAGAAAGCGTAGCTACACACTTAAAACAAGCCCACAACAAAGCGATTAACTTAGACATCCCTCTAGGCGTGATGCCGTACAAACTCGAAAAAGACTCGTGGATTTGCGTCGTCTGCTCCAAGACTGAGCCCACGTTACACCATCTCAACAAGCACACAATCACGCATTTCCTCAGCTACGTGTGCGAGATCTGCGGCAAGAGCTACGTGGCCAGTACCGGGCTCATACAGCACGTCAAAGCTAAACACGAGATAGACAATCAGGCGACCTGCCGGCGCTGCAAGAAAGCTTTCCCCTCGCTAGAAGCTAAAGTGAAGCACCAGAAGACTGACAAGAGTTGCATGCGGCATTGCTGCTCGCTCTGCCCCGAGAGATTCCCCGTCTGGGAACTCAAGCAGCGCCATATGAGCGAGGTGCATGGGGAGACGAAAAAGAAGTATCATTGCCCAGATTGTAACGTAAAGTGCAACGACCGGAGGGCCTTCTATGATCACTTTAAGACTTGCCACTCGCAGGAGTGTCTCGTTTGCGTGCATTGCGGACTTAAATTCGCTTCGGCGTCCAAGTTGAATCGGCATCTGGATGGATTGGCCTCAGACGCAGCCGCGGACACGACCCGTCTGATTCTTAAACACTCGACGGCCTACGTGTTTAACTTACAGATCAAAGGGTCCTCGCACAATATCGAGTGTTGCTATTGCTCCGGAGTATTCGATGACCCCGAGCGGTTCAGATGGCACGTAGACGATTCGCACTCTGACGTGGACAGATCTCTCGTACACCACAGATGGATCACCCCGCGGGTCGATATCACCAATCTGCGTTGTAGGCTCTGCTCCCAGCCGATGGAGACGTTAGACAAGCTTGTTGAACACTTCAAATCTGGACACGGCATGAAGATTCAGTCTAAACCTTCCGCGATAGTGCCAATGAAACTAAATAAGGATCTGTACGTTTGTCTTATCTGTAGCAAGCGATTCTCGGAACGTTTTAGCCTCTTTAAACACTCTGGAACACATTTCGGGAGTTACATATGTGACGCGTGCGGTAAAAATTACCAAACCAAGTTCGGCCTTAGAGTTCACACGGAGAAGCAACACGCCAACGCAGGGAAGTTTATTTGTGCAAAGTGCAAGGAATTGTTTGATACTAAGGAGGAACTGAAAAAGCACGGAATTGAAACCAAGCACGGCTTGGCGTCGGTTTGTCCAATATGTGACGATAGGTTCACCTCTGGAAACCTGATTGCCGGTGATGCCGCTCTGGAGACAGCCTGTTTCATACTAAAGCATTCCACGGCCTACCCCTTTGGGATACAACGGAATCTTCCGAACAAGATTCAATGTTGCTATTGTGATATATTTATCGGTGACCCCGTGCAGTTTCGACGGCACGTCGATGACGAGCATTCGAATGTCGACCGATCGCTCTTGAACGTCAAACGTTCGAAGCAGGCGGCTACCAGGGTCGATATCACAGATCTCAGATGCCGACTTTGCCCTAAGCCTTTCGAAACGTTAGAGCAGCTAGCTACCCACTTGAAAGACGCTCACGATATGACACTGCAGACAGAGGTTACCGGGCTCGTGCCAATGAAATTAGAGAAGGATCGCTACATCTGCGTTACTTGTAATAAAAAATTCGCCGGCCTGACGATACTGTACATACATTCGGGTACACATTTCGCGCGGTACATCTGCCATACATGCGGCAAGAACTTTGAGACCCGCGGCGGGGTCCAGGGCCACGCCGCGAAACACATTAATAAGATAATCTGTATCAAATGTAAGGAAGTATTCGAGACTAAGGACGAATTGAAAAAGCATAAGCTCGTGAGTAAGCGCTGTCAACCGATGGCCTGCACATTGTGCGTCGAACGATTCACTTGTTGGGAACGCCTGCAGGTTCATCTAGTGGAAGTGCACAATAAGCCCAAGAAAAACTTCCCGTGTCTGGAGTGCGGTGACGTATTCGAGACTCGGGTCTCCCGGTACAAGCACTTCAAATCTGCTCACACTGACGAGCTGAAGTGCATCTACTGTGAGAAGAAATACGGCATTAAGCGAGACTTGGATGACCACATGAACACTCACACGGGCGAGCGGCCCTACAAGTGTAATGAGTGTGATAAATCGTTCAACGCGCTGAAGAGATTGAGGAAACATCAGGCCTCGAAGAGGGTACACGCCCACCTGAAGGAAATTGTCCAAGATCCGTCTATTGCGGACCTGTTCGTCGCTGGTGCCGCGGCGGAGTCGGCCGGTCTTATTCTAAATAACTCGACGGCATATCCTTTCGCGCTTCGAACCAGGCATCCGAATAAAATACAATGTTGCTACTGCGAGAAACTGATCTCCGACCCGGTACAGTTCAGGGAGCATGTGGACATGGAGCATGCCACGCTTTTGGACCGCTCCGTGCTCAAATATAAGCGCGCGCAACAGTCCGCCACGCGGGTCGACATTACAGACCTCCGGTGCCGACTCTGTCCCAAACCCTTCGAAAACTTAGAGCTATTAGCGACCCACTTAATAAATTTCCACAAAATCAACCTTACCACTATAGAATCTGGCCTCGTACCAATAAGACTAGAGAAGGACCGTTACGTTTGCGTCACGTGCCATAAGAAATTCTCTGGTCTCACCATGCTTTACCTACACTCGGGCACGCACAATGCGAGGTATATCTGCCACACTTGCGGCAGAAACCTCGAGACCGCCGGCGGCCTGCGAGCCCATGCTATACGACATTTGAACAAGATTATCTGTCTCAAGTGCAAAGAGGTGTTCCCTTCGAAGGAGGAACTGAAAAAGCACAAACTTACGAGTAAAAAGTGTTTACCATCCGTCTGCAAGATTTGTCAGGAGCGGTTTACGTGCAGGGAGCGGATGGAGATCCACCTCGTCGAAGCACACAATCAGCCGAAAAAGTTTTTCCCTTGTTCAGAATGCGGGGAGGTTTTCGAATCGCGCGTCGCACGCTATAAGCATTTCAAGTCTGCGCACACAGACGATCTGAAATGCAAGTACTGCGAAAAGCGGTACGGAACGAAGCGTGACCTAAGCGATCACATGAACAGTCACACGGGGGAAAGACCTCACAAGTGTACGATATGCGAAAAGACTTTTAGTGCTAGTAAGAAATTACGCAAGCATATGGCATCGCCGAGGGTGCACGCCCATCTCAAGATCGCTTAA
- Protein Sequence
- MSQEHQTFSLAMVYAKLPKTEFIKIDLSDLKCRICTQSYDNVESVATHLKQAHNKAINLDIPLGVMPYKLEKDSWICVVCSKTEPTLHHLNKHTITHFLSYVCEICGKSYVASTGLIQHVKAKHEIDNQATCRRCKKAFPSLEAKVKHQKTDKSCMRHCCSLCPERFPVWELKQRHMSEVHGETKKKYHCPDCNVKCNDRRAFYDHFKTCHSQECLVCVHCGLKFASASKLNRHLDGLASDAAADTTRLILKHSTAYVFNLQIKGSSHNIECCYCSGVFDDPERFRWHVDDSHSDVDRSLVHHRWITPRVDITNLRCRLCSQPMETLDKLVEHFKSGHGMKIQSKPSAIVPMKLNKDLYVCLICSKRFSERFSLFKHSGTHFGSYICDACGKNYQTKFGLRVHTEKQHANAGKFICAKCKELFDTKEELKKHGIETKHGLASVCPICDDRFTSGNLIAGDAALETACFILKHSTAYPFGIQRNLPNKIQCCYCDIFIGDPVQFRRHVDDEHSNVDRSLLNVKRSKQAATRVDITDLRCRLCPKPFETLEQLATHLKDAHDMTLQTEVTGLVPMKLEKDRYICVTCNKKFAGLTILYIHSGTHFARYICHTCGKNFETRGGVQGHAAKHINKIICIKCKEVFETKDELKKHKLVSKRCQPMACTLCVERFTCWERLQVHLVEVHNKPKKNFPCLECGDVFETRVSRYKHFKSAHTDELKCIYCEKKYGIKRDLDDHMNTHTGERPYKCNECDKSFNALKRLRKHQASKRVHAHLKEIVQDPSIADLFVAGAAAESAGLILNNSTAYPFALRTRHPNKIQCCYCEKLISDPVQFREHVDMEHATLLDRSVLKYKRAQQSATRVDITDLRCRLCPKPFENLELLATHLINFHKINLTTIESGLVPIRLEKDRYVCVTCHKKFSGLTMLYLHSGTHNARYICHTCGRNLETAGGLRAHAIRHLNKIICLKCKEVFPSKEELKKHKLTSKKCLPSVCKICQERFTCRERMEIHLVEAHNQPKKFFPCSECGEVFESRVARYKHFKSAHTDDLKCKYCEKRYGTKRDLSDHMNSHTGERPHKCTICEKTFSASKKLRKHMASPRVHAHLKIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01545075;
- 90% Identity
- iTF_01545075;
- 80% Identity
- -