Ycag013675.1
Basic Information
- Insect
- Yponomeuta cagnagella
- Gene Symbol
- -
- Assembly
- GCA_947310995.1
- Location
- OX371295.1:7500390-7507039[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 45 0.0021 0.15 13.1 1.5 1 23 40 62 40 62 0.97 2 45 0.042 3 9.0 1.5 3 23 91 112 89 112 0.94 3 45 0.65 47 5.3 0.1 2 23 133 155 132 155 0.95 4 45 0.013 0.92 10.6 2.1 2 23 161 183 160 183 0.95 5 45 0.0038 0.27 12.3 4.6 1 23 188 211 188 211 0.94 6 45 0.97 69 4.7 0.3 2 23 214 236 213 236 0.88 7 45 0.13 9.1 7.5 3.5 1 23 296 319 296 319 0.94 8 45 1.2 84 4.5 0.1 2 23 347 369 346 369 0.89 9 45 0.18 13 7.0 0.7 3 23 393 415 391 415 0.94 10 45 0.014 1 10.5 0.2 1 23 420 443 420 443 0.96 11 45 0.7 50 5.2 0.1 1 23 448 471 448 471 0.94 12 45 4.9 3.5e+02 2.5 1.4 3 23 478 499 475 499 0.92 13 45 0.00058 0.042 14.9 6.0 1 23 503 526 503 526 0.97 14 45 0.032 2.3 9.4 1.0 2 23 533 554 532 554 0.96 15 45 0.0012 0.084 13.9 1.8 1 23 560 582 560 582 0.97 16 45 2.6 1.9e+02 3.4 3.8 2 23 668 690 667 690 0.89 17 45 3.3 2.3e+02 3.1 1.3 2 23 711 733 710 733 0.94 18 45 0.27 19 6.5 2.5 2 23 739 761 738 762 0.93 19 45 0.5 36 5.6 1.3 1 19 766 784 766 789 0.83 20 45 0.15 11 7.2 0.9 2 23 792 814 791 814 0.95 21 45 0.0072 0.51 11.4 0.7 2 22 818 838 817 838 0.94 22 45 0.0037 0.26 12.3 0.5 1 23 882 905 882 905 0.96 23 45 0.12 8.9 7.5 0.1 2 23 933 955 932 955 0.94 24 45 0.0013 0.094 13.7 0.1 2 23 978 1000 977 1000 0.95 25 45 0.00034 0.024 15.6 0.4 3 23 1007 1028 1005 1028 0.94 26 45 0.51 37 5.6 1.2 5 23 1036 1055 1033 1055 0.94 27 45 0.21 15 6.8 3.0 1 23 1060 1083 1060 1083 0.97 28 45 0.00027 0.019 15.9 5.1 1 23 1087 1110 1087 1110 0.97 29 45 0.00012 0.0087 17.0 0.7 2 23 1117 1138 1116 1138 0.97 30 45 0.034 2.4 9.3 0.8 1 23 1144 1166 1144 1166 0.96 31 45 1 72 4.7 0.3 2 23 1269 1291 1268 1291 0.89 32 45 0.016 1.2 10.3 0.5 3 23 1313 1334 1311 1334 0.92 33 45 0.00023 0.017 16.1 3.5 2 23 1340 1362 1339 1362 0.94 34 45 0.021 1.5 10.0 1.1 1 20 1367 1386 1367 1390 0.90 35 45 0.011 0.81 10.8 0.5 2 23 1393 1415 1392 1415 0.92 36 45 0.23 17 6.7 1.2 2 19 1422 1439 1421 1442 0.92 37 45 0.0028 0.2 12.7 0.4 1 23 1489 1512 1489 1512 0.96 38 45 9.6 6.9e+02 1.6 0.0 2 23 1540 1562 1539 1562 0.92 39 45 9.3 6.6e+02 1.6 0.2 1 23 1584 1609 1584 1609 0.84 40 45 0.00074 0.053 14.5 2.8 3 23 1616 1636 1614 1637 0.93 41 45 0.002 0.15 13.2 1.8 1 23 1642 1665 1642 1665 0.96 42 45 0.006 0.43 11.7 0.1 2 23 1671 1693 1670 1693 0.93 43 45 0.00011 0.0078 17.1 3.5 2 23 1698 1720 1698 1720 0.97 44 45 0.001 0.072 14.1 0.4 2 23 1727 1748 1726 1748 0.96 45 45 0.03 2.2 9.5 1.6 1 23 1754 1776 1754 1776 0.96
Sequence Information
- Coding Sequence
- ATGTGCCTATCCTTTTACGACACACGCCTGTCAAAGACCGCATCGACGCGGCGGCGGCGCAATCTGATCAACATATTCAACAACACTTCGCTTATACCTTTCAAATGGCGGGGAAAGTACATCTGCTACTATTGCGATGACAAATTCAGCGACCCCAAACTCCTAAGGAAACACTCCAAGTCCCACGGACTGATCGCGGCTAAAGACAAAAGCCTCGAGAGCCAACGCAAGGCTAACGTCGAGGTGAAGTTAGACGTATCAGAGATCAACTGCGAGATCTGTCATGAGAGCTTTGACACATTCGAACAAATCATCCATCATTTGACCGTGAAACATGACTTGGAATACGAAACCGAAGTGGCGTCGCCAATAGAGCCTTACAGGCTGACCGACCTCAAATGTCTAGTGTGCGGTATTTTAGCGAGAAACTTCATCAATCTCGTTAGTCACATGAACAATAATCACCCGAAAAATAACTTGCCGTGTGAACATTGTGGGCAGCAGTTCAATAAATTGCGGGACTTGGATACACACAAAAGGAATTTTCACAAGGAAGGTGGTTACTCCTGCGATACGTGTAAAAAGTCTTTTACAACCAATCAGAGGTTGAAGGCGCACTGTCGTAGCGTACACTTATCACGTTGCGAGATTTGTTTGAAGCAGTTTTCCACTTTAGACATAAAAAATAAACACATTGCGATATCACACGGCGATTGTGCAATCAAATCAGAGTTTCCAATTAGTGAGTTTGACGAATGCGACTTGCTGGAGGCCACGCATCAAGATCTCAATCTCCGCAAGGAAAAGAGTAAAATGAATCGCGCCAACATCGCCATTATACTTAACATGACTACCGCCATTCCGTTTAAATACTTTAAAAACCAGTACTTGTGTTTCTACTGCTCTAGGTACTTCACTGAATGCGATCAGCTCAGGGAACACACGGTCACCTCTCACGTAGCGTATAACACTAAGCAGAAATGTACGAAAGCTCTAAAAGGCAGCGAAGTACACATAAAAATTGACATTGCCGCCCTTTCCTGCAAAGTTTGTTTCGAAGGGTTCAACGACTTGGACTCTATAGTCGACCATCTCATAGACAAGCACAGCGCAAAATATGACAAAAGCATAACTGGTATCATGCAACCATTCAAGTTGGCTAGAGAAAACATGCACTGTCCTATTTGCGACTTGAATAATTTCAACTACCTAGGCACGTTACTTAGACATATGAATAAGGTTCATAGCGGCAATAACTATATCTGTGATAACTGCGGAGAAGGCTTCGGTAGCACTCTGCTCTTGAAATCTCACCTCTCTCGCTTCCATAGTGACAAGGAATTTAAATGCGACCTTTGTGGCATGAATCTCGCTAACGGTTTGAAGTTGGAAACCCATCGGGCTAAGATACACGGCATAAAGTGCAATAACTGTCCGCGATGCCCGGAGAGCTTCCTCTCCGATTACGCAAAAAGGAAACACTTAATGCGAGTCCACAACGTGGGACACAAATGCACTTATTGCGATCGGATGTTTACGAAAAACTCTTTCATGAGAAGCCATATAAAACGTACGCATTTGAAGGAGAAGAACGTGACGTGTCCGGTGTGCCATGTTAAATTCTTCGACAACTATATCCTCAGACAGCATATGGTTAAGCATATAGGCGATAAGAATTTTCACTGTGATGTGTGCGGTAAAAGTTTCTTCTGGAAAAAGAATCTCAGAGGCCATATGGCCTCACACAATATCGCAAAAATGGACTCGAAATACACGACAAAGCAGCGGAGAGAGAATCTGCAAATATTGTTTAATAACACAACAGTGATACCTTTTAAGTGGCGCATGCGATATCAGTGTTTCTACTGCCCGCACCAAGAGGCTGAATTCACAGAATTCTTCAAACATACAAAGTCACATGTAAAACTTAAATCCACCGAGCATCCGTACAAACAGTTCATTATAACTAGGGTTATCGTCAAAATCGACGTTTCGAACCTGACCTGCGAACGTTGTGACCACTCATTCAGGTGTTTCGATGATTTAACTACGCATTTAGTCGAAAAACACAGGTTAAAATACGATCCCAGTGTCAACAACCACGTTGAAATGTACAATCTGGACGAATTGCGATGTCCGCAGTGTTCGGACCGATTTAAGTTATTCATAAAACTGCGTTCGCATGTGAAGAATAATCATGCTCCTCTGACGTTGTACTGTGATCAGTGTACGCAAAAGTTTTACAGAAAGCGCGATTTGGCGTTCCATATAAAAAATGCCCATCACGAAGATGGCTATAACTGCTCAGTTTGCTCAGAAAAGTTCATCAATAACAGCAAACTTGGTTTCCACACTAAAGACAAGCATATAACTGTGTGCCACATCTGCTATGAGAGTTTCCAAACTCCGTTAATGAAAAGAGATCATATTAAATCCGCTCATAAAAGCCAGAGCTGTCCACGATGCTTCAGAACTTTTATCTCCAAATTGGGCTTGCAAAAGCACATAAAGAAATGTGCTGTAAAATTAGAGTTTCCCAAAGAGACACAGATTTTGAAAACCTCCACGAAACGAATTAGGGAAAACCTAGCTTGTATACTCAACATGTCCACAGCTTTGCCCTTTAAGTATTACATGAATAGATTCCGCTGTTTCTATTGCCCGAAAGATTTCACCGATTTCGTACCCCTAAAAGAACATACACTTGTAGATCATCCTTACTGTGATGTAGACGAACGAGGACTAAAACTTTGTCGAGGTAAAGACATAAACGTCAAATTAGACATAGCATCTCTCTCTTGCAAACAATGCTTGGAGTCTTTCGAGGAACTTGACACTTTAATAGACCACCTAATTGTGAATCATAAGACCAGCTACGATAAAACCATCACAGGTTTCATGCAGACGTACAAACTAGTCCAGGACCATATGGTTTGCCCCATATGCCAAGTTACGTTCAGATACTTCGGTAAGCTGCTTGCGCACATGAATGAAGTGCACACAGACAACAATATCATTTGCGTTTACTGCGGTCAGACGTTCCGAAGTCAACCCAACTACCGGTCCCACGTATCGCGTTATCACAAACAAGAAAACTTCAAATGTACTTGCGGTGAGACATTCGACAACATAATGAAACTCAAAACGCACAAAAATAAAGCACACAGAGCTAAGACGCATAAGTGCCAGCTGTGTGCCGAGTGTTTTGAGACTATTTACCAGAGGTTGCGTCACATGGTGACGGCCCACAACGTGGGGCATAAATGCTCTTTTTGCGGCAGAGTCTTCACTAGAAACTCGTTCATGCACGATCACATTAGACGCGCGCACTACAAGGAAAAGAACGTGGAGTGCACGGTTTGTGGTGAAAAGTTTTTTGGCAACGCGCATTTGAAGAATCATATGATCAAACATATAGGGGAGAGGAACTTTCACTGTGACGTGTGCGGAAAGGCTTTCCTTTGGAAGAAAAATCTCAGAGGGCACATGGCGTCACATAACAAACGCGCTTTGATGGTACATTTTACAGAAGAGAATTTCTTTTCAGATGAAGATACGAACCGAAGGTCCGCGGATAACCCAACGAAACGCAGGCGCAGGAATTTGGAAATACTTTTCAACAACACGTCGGTTATACCGTTCAAATGGAGAGGCAAAATACTCTGCTACTACTGTGTGCAAGAGGTTGATGTCAACGACCTGAAAAAGCACACGAAATCCCACGGCTGTTGCTCTAGCAAGGACTTTGCCATTAAATCTGTAAAAGCCGGAGATCGAGAGATAAAACTCGACGTCTCAGACATTGTTTGCGAACTGTGTAACGAGCATTTTCCTAATATTAACGAGGTTATCAGTCACTTGACATTCAAGCACAAGTTAGATTACGATCAGGATGTAGATATACTACTGAGTACTTTTAGGCTCTCTGATTTGACTTGCATCGAATGTGGGGAGGAGTTCAAATCGTTTAAAAACTTGCTCAGTCACGTGAACAAGAATCACCCGCAGAGCACACTGGTTTGCGACCAGTGTTCTAAGTGTTTCACCAAGAAGAGAGATCTGAAGATACACATGAGTAATTACCATAAGGTTGGCGGATATAAGTGCTCCGAGTGTGACGAGGAGTTCCATTCAAACTGGAAGCTAGTCACACACAATGAAGCTAAACATTTCTTACCTTGCAACGTCTGCTTCAAGAAGTTCTCTTCACCAAACAAAAAAACGAAACACATAGAGGCTGAGCATTTAACCTCTTCCATCTTACAATGCGGCTTTTGTTCTCAAACCTACAGCACCAAGAAATCGTTCCTCTCACATTCCCTAAAGTGTAACGGCCACAAAGAACCGGAGATGGAAACCTCCACTAAAACGCCCGGCGATTGCAAAGTTCGTAAAATCAGAAATAATCTCGCGTGTATCATCAACATGTCCACAGCCTTACCTTTTAAGTACTTCATGAATCGTTTCCGGTGTTTCTACTGCCCAAAGGATTTCGTTGAATCCGATGAAATGAAGGAACATACTATTATGGAACATCCGGTGTGTGATATTAAACATAGGAGCATGAGATTGCGCGGTTTACACAACATATTTATTAAATTAGACATCACATCTTTGACTTGTAAAGTTTGCTTCGACGCTATTCCTGACTTAGACACTCTAGTTAATCACCTAATTACAGAGCATAAAGTGGCCTATGATAAGACTGTAGATAATCGGATACAAACGTTCAAACTGATAAAGGATAGCTACCCGTGCCCGTTCTGCCCCCAAAAGGAACCTTCACGATACTTTGGTCAGGTCCTGAAACACATGAACAAAGTGCATTCTAACAATAACTTAATCTGTGTCTTTTGCGGTACGGCCTTTAGGACCGACTCCCATTTGCGCTCCCACATATCTCGCCACCATAGACCCGAAGGTCACAAGTGTACAGATTGCGATCTGGAGTTTTCTTCCAAACTCCGTCTGAACACGCATCAGGCGAAGGCCCACGGTACGAACATAGTGAAATGTCCCGATTGTCCTGAGAAGTTCCCCAGTACCTACGAGAGACAGAAGCATCTGATAGCGGTGCACAAGTCCGGTGCCACGTGCAAATACTGCGGCCGCATGTTCACTAGGAACTCCTTCATGCACGATCACATCAGGCGCATTCATCTGCGGGAGAAAAAAGTCGAATGCAACATCTGCAACATGCGCTTTTTCGACAACGTCATGTTGAAGATGCATATGGTAAAGCATGTTGGGGATAGGAATTTCCATTGTGACATTTGTGGAAAGAAGTTCCTGTGGAAAAAGAATCTGAGAGGGCACATGGCGTCCCACGACAAGCATGCTAATGCTCAGCATCCGGACATGTTGCATGTATAA
- Protein Sequence
- MCLSFYDTRLSKTASTRRRRNLINIFNNTSLIPFKWRGKYICYYCDDKFSDPKLLRKHSKSHGLIAAKDKSLESQRKANVEVKLDVSEINCEICHESFDTFEQIIHHLTVKHDLEYETEVASPIEPYRLTDLKCLVCGILARNFINLVSHMNNNHPKNNLPCEHCGQQFNKLRDLDTHKRNFHKEGGYSCDTCKKSFTTNQRLKAHCRSVHLSRCEICLKQFSTLDIKNKHIAISHGDCAIKSEFPISEFDECDLLEATHQDLNLRKEKSKMNRANIAIILNMTTAIPFKYFKNQYLCFYCSRYFTECDQLREHTVTSHVAYNTKQKCTKALKGSEVHIKIDIAALSCKVCFEGFNDLDSIVDHLIDKHSAKYDKSITGIMQPFKLARENMHCPICDLNNFNYLGTLLRHMNKVHSGNNYICDNCGEGFGSTLLLKSHLSRFHSDKEFKCDLCGMNLANGLKLETHRAKIHGIKCNNCPRCPESFLSDYAKRKHLMRVHNVGHKCTYCDRMFTKNSFMRSHIKRTHLKEKNVTCPVCHVKFFDNYILRQHMVKHIGDKNFHCDVCGKSFFWKKNLRGHMASHNIAKMDSKYTTKQRRENLQILFNNTTVIPFKWRMRYQCFYCPHQEAEFTEFFKHTKSHVKLKSTEHPYKQFIITRVIVKIDVSNLTCERCDHSFRCFDDLTTHLVEKHRLKYDPSVNNHVEMYNLDELRCPQCSDRFKLFIKLRSHVKNNHAPLTLYCDQCTQKFYRKRDLAFHIKNAHHEDGYNCSVCSEKFINNSKLGFHTKDKHITVCHICYESFQTPLMKRDHIKSAHKSQSCPRCFRTFISKLGLQKHIKKCAVKLEFPKETQILKTSTKRIRENLACILNMSTALPFKYYMNRFRCFYCPKDFTDFVPLKEHTLVDHPYCDVDERGLKLCRGKDINVKLDIASLSCKQCLESFEELDTLIDHLIVNHKTSYDKTITGFMQTYKLVQDHMVCPICQVTFRYFGKLLAHMNEVHTDNNIICVYCGQTFRSQPNYRSHVSRYHKQENFKCTCGETFDNIMKLKTHKNKAHRAKTHKCQLCAECFETIYQRLRHMVTAHNVGHKCSFCGRVFTRNSFMHDHIRRAHYKEKNVECTVCGEKFFGNAHLKNHMIKHIGERNFHCDVCGKAFLWKKNLRGHMASHNKRALMVHFTEENFFSDEDTNRRSADNPTKRRRRNLEILFNNTSVIPFKWRGKILCYYCVQEVDVNDLKKHTKSHGCCSSKDFAIKSVKAGDREIKLDVSDIVCELCNEHFPNINEVISHLTFKHKLDYDQDVDILLSTFRLSDLTCIECGEEFKSFKNLLSHVNKNHPQSTLVCDQCSKCFTKKRDLKIHMSNYHKVGGYKCSECDEEFHSNWKLVTHNEAKHFLPCNVCFKKFSSPNKKTKHIEAEHLTSSILQCGFCSQTYSTKKSFLSHSLKCNGHKEPEMETSTKTPGDCKVRKIRNNLACIINMSTALPFKYFMNRFRCFYCPKDFVESDEMKEHTIMEHPVCDIKHRSMRLRGLHNIFIKLDITSLTCKVCFDAIPDLDTLVNHLITEHKVAYDKTVDNRIQTFKLIKDSYPCPFCPQKEPSRYFGQVLKHMNKVHSNNNLICVFCGTAFRTDSHLRSHISRHHRPEGHKCTDCDLEFSSKLRLNTHQAKAHGTNIVKCPDCPEKFPSTYERQKHLIAVHKSGATCKYCGRMFTRNSFMHDHIRRIHLREKKVECNICNMRFFDNVMLKMHMVKHVGDRNFHCDICGKKFLWKKNLRGHMASHDKHANAQHPDMLHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01544154;
- 90% Identity
- iTF_01544154;
- 80% Identity
- -