Ycag019287.1
Basic Information
- Insect
- Yponomeuta cagnagella
- Gene Symbol
- bab1
- Assembly
- GCA_947310995.1
- Location
- OX371267.1:10374005-10375510[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.6e-13 4.8e-10 39.5 0.0 4 45 334 375 331 375 0.92
Sequence Information
- Coding Sequence
- ATGGGAAGCAGCGAGGGCCAACAGACTTTCTGCCTGAAATGGAACCACCATAAGACCAATCTGGTAGAGATCCTTGAGGCGCTCATCAAGGTGGAGACCTACGTAGACTGTACATTAGTGGTCGATGACCAGGTCACCTTCAAGGCCCACCGAGTGGTCCTTGCCGCTAACTCACCCTATTTCCAATCCATTCTTGCGGATGTGCCGATGGATCACTGCAGCATCCTATTCCCCGGTGTCAAAGACTTCGAGATGCGTGCGCTCCTCGAGTACATGTACACGGGTGAAGTGAATGTGACGCAGGCGCACATCCCGCGCATCATGAAGGTGGCGGAGCAGTTGGAGGTGAAGGGCTTGTTTGACATGAGCGAGCTGCGGCGGCACGCGGGCGGCGGCGGGGGCGACCACACCCCGGCAGCCTCCCCCCCGCGCGTCGTTCCCGCTGCACCCTCCAGCATTTCTCCACCCACACCCGCGCCGCCTTCCCGCTGGCCGCCACCACCCCCTTCGCTACCTGCGCTCTCTGCCGCCTACGATTCCGCTGACATGAACCCGCTCAAACGCAAGAAACTCTCTAGCATGCTCGCCATCCGCGACACTCCGATCCTTAGAAACGTCCTCGCTCAGTCGGCACCCCCCGATTCTTCACAACCCGTTTCTCTTGTTTGCCACCCCGTACCGCAACATCCGCCACCGCGTGTGCATTCTAATGGCTCGGCGCACGAGATGGACCGGGCGCCCAGCCCGCAGCGACCCTTCGACTACCGCCCCCGCAGGCTGTCCTCCCGCGCCTCCTCGCCACACTACAACCGCTCCGATCGCTCGGAAGATGCGCACTCACCCTACACTGAACGTTCTTTCGATGACGAAGCCCCCCGAACTTTCCACTCTTCACCACCACCTGCTAACTTTCAACAAGACGTGCGAGCTGGCCTGGCACCATACGTCCCCCCGCAGCAAAAACCAGAATGGAAACGATACAAGCAATACACCAGATCTGATATAATGTCTGCTATAGAATGCGTCAGGAATGGTATGAGTGCTCTTCAGGCCTCACGAAAATATGGAGTCCCTTCACGTACTCTGTACGATAAGGTAAAGAAGCTGGGAATTACGACAAGCCGACCGATGAGTCGAGGGGTTAAGAGGGAACCGAATGGAGCGGCTTTTCCGTACGGAATAAGTGGTACAAGCAGCAATGATGATCATTCTTCATCAACGCCTTTGATCGACGCGTCATTCCTGCAGCAAGCGTTAGAGGGTGCGACGCGAGACGGGGGCCGCGAGGCGCTGCACGCGATGGCGCTGGCAGCGGCGGCGCACGCGGCGCTGGCCCCGCGCTCGCCGCCGCGGGCGTCGCCTCCTCGTTCCCCGCGCTCGCCTGTGGATGACGACCACGTGGAGGACCTATCGGTGGCGCGGCGCCGCGAGCCAGAGCCCCCGTCCGGCGTCATCATGCCGCCGCGCAACTTTGCGCTGGACTGCAGCAGTGCCGAGCGCGATTGA
- Protein Sequence
- MGSSEGQQTFCLKWNHHKTNLVEILEALIKVETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDHCSILFPGVKDFEMRALLEYMYTGEVNVTQAHIPRIMKVAEQLEVKGLFDMSELRRHAGGGGGDHTPAASPPRVVPAAPSSISPPTPAPPSRWPPPPPSLPALSAAYDSADMNPLKRKKLSSMLAIRDTPILRNVLAQSAPPDSSQPVSLVCHPVPQHPPPRVHSNGSAHEMDRAPSPQRPFDYRPRRLSSRASSPHYNRSDRSEDAHSPYTERSFDDEAPRTFHSSPPPANFQQDVRAGLAPYVPPQQKPEWKRYKQYTRSDIMSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTSRPMSRGVKREPNGAAFPYGISGTSSNDDHSSSTPLIDASFLQQALEGATRDGGREALHAMALAAAAHAALAPRSPPRASPPRSPRSPVDDDHVEDLSVARRREPEPPSGVIMPPRNFALDCSSAERD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025187;
- 90% Identity
- iTF_01545882;
- 80% Identity
- iTF_01544802; iTF_01546566; iTF_01543095; iTF_01545015; iTF_01546781;