Ycag001707.1
Basic Information
- Insect
- Yponomeuta cagnagella
- Gene Symbol
- Mblk-1
- Assembly
- GCA_947310995.1
- Location
- OX371289.1:3997861-4019144[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-15 1.1e-12 48.0 0.0 1 39 152 191 152 194 0.95 2 2 2e-18 1.1e-15 57.6 0.0 1 43 364 407 364 409 0.95
Sequence Information
- Coding Sequence
- ATGAGCTACCTAACGTGGATGAGTCCAGCGTCAGAGTCAGACAGCAGCTCTGTGTCGGGGGCAAAAAGTCCTGCGGCCGCACCGCCGCTACTGCAGCACCTGCTGCAGCTGCAGGCCCACAACCCGCAGGCTATAGCTCAGTTCCAACAAATGATGGCGGCCTTGGCGTCCCTCGGGACGGGGTTTGTGCCCCCGGCCTTGTCGCAGGCGTGGCTGATGCAGAGACTGGTCCAGACACGACAGCAGGAGAGCCGGCTCCCGACAGAGGGCGCTGACAAGGTGCCCCCCGCGGATGCGTCGCCTTCGATGACGTCAGAACAGCCCCTGGACCTCAGCGCCAAGTCCAGCAGCACCGGGGGCAGCCCTCCTCCCCAGGGGAAGGGGCTCGAGAACTCTAGGCCAAAAAACTCGATGCTGGAATGTTCAAGCAACAGCGCAGCCCGGCGGGCGTACACCGACGATGAACTGCAGAGCGCTCTGCGGGACATCCAGTCAGGCAAGCTGGGCACGCGCAGAGCCGCCGTGGTCTACGGGATCCCCCGCTCCACACTACGGAATAAAGTTTACAAGCTCGCCTCAGAACCTGGCCACGATTCTGACCCCGACAGCGACCCCGAAAGAGGCGACAGGGACTCTCCACCCTCTGTCATCCTCAAGATCCCGACATTCCCGATCCCTGACGAGAAATCCCCTTCGCCTGCCACTCCGGTGACGACCCCAATCACTCCCATAACACCAAATTTCCAACCACCGTCGAAACCGCCTATGAACCCGCCTTCGCAACTTCTGTTACCCCCCTCGGTGTACGCTGATCCGCCTTCAGCCAAGCATCTCTTTACGTCGCTCAGTGACGTCATAGCTAAGAGCATAAGCCAGAAGTTTCAGCAGCCTCTAGACCGGCAACATGCGGAGATGTACGGCATGCGGCCGCAGGACCGGCACGTGTCCGTCATTAAAACTCCGCCGGAGAACCCTAGGAACTACTCAGTCCCGAGCAACTCGAGAGGCAACGCGGCGAACAACAACGGGCAGCAGCAACAACCAGGAGGTAAGGGCACGAGGCCGAAGAGAGGCAAATATAGGAACTATGATAGAGACAGCCTCGTTGAAGCCGTGAAGGCGGTTCAGAGAGGCGAAATGTCAGTCCACAGAGCCGGCTCGTACTACGGCGTACCTCACTCCACCCTCGAGTACAAAGTGAAGGAGCGGCATCTCATGCGACCGAGAAAGCGCGAGCCTAAGCCGCCCCAAGACATGACGAAACCTCAGCCGCCAAAACCTCCACAGCCAAAGCCGCCGACCAAGCCGTTCAGCAACGGAATGAACGGGCCAGAGAACGCTGGTTACCCTTCCGGTTACTTTTGGCCCCCGCCCGGGTTTGCCCCGCCGCCGCCCACGCCTGAGCTGTACGCATCCCACATGATGCGTCGGTTGCGCGAAGAGGCGCCGCCTCCAGCGAACGGGTCCTTCCTAGAAGGTATCATCAGGTCGAGCCTCGAGAGGCCGGGAGCGGCGCTCCTGCAGCGGCTGACGGCGGAGCCGCGGCCGCCGATGACGCCGACCACGGACGCACCGAGCCTCCTCCGGCGGCTGGCGGGGGAGCCAAATAACGAGGATTCTCCCCCTGCACGTCGGCCCCGCATAGATAGCTCAGATAGACAACTGGCGGCCGAGATGAGGGAAGCAGTGCAGCGGCTAAGAGCCGACAAGATGAGGCCCAGGAACGGCACGCCGACGCCGCCGGCCGCCGTCACCCCGGGCGCGGCCCTGTCCCCCCCGCCGATACCCCCGGCCGCACCCCCTGACCGCCCCTAG
- Protein Sequence
- MSYLTWMSPASESDSSSVSGAKSPAAAPPLLQHLLQLQAHNPQAIAQFQQMMAALASLGTGFVPPALSQAWLMQRLVQTRQQESRLPTEGADKVPPADASPSMTSEQPLDLSAKSSSTGGSPPPQGKGLENSRPKNSMLECSSNSAARRAYTDDELQSALRDIQSGKLGTRRAAVVYGIPRSTLRNKVYKLASEPGHDSDPDSDPERGDRDSPPSVILKIPTFPIPDEKSPSPATPVTTPITPITPNFQPPSKPPMNPPSQLLLPPSVYADPPSAKHLFTSLSDVIAKSISQKFQQPLDRQHAEMYGMRPQDRHVSVIKTPPENPRNYSVPSNSRGNAANNNGQQQQPGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDMTKPQPPKPPQPKPPTKPFSNGMNGPENAGYPSGYFWPPPGFAPPPPTPELYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRPPMTPTTDAPSLLRRLAGEPNNEDSPPARRPRIDSSDRQLAAEMREAVQRLRADKMRPRNGTPTPPAAVTPGAALSPPPIPPAAPPDRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01546561;
- 90% Identity
- iTF_01546561;
- 80% Identity
- iTF_01546561;