Basic Information

Gene Symbol
Xbp1
Assembly
GCA_947310995.1
Location
OX371275.1:18252457-18254114[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1e-18 5.4e-16 58.9 10.9 2 63 41 102 41 104 0.93
2 3 0.0032 1.7 9.3 0.2 33 56 86 109 85 113 0.90
3 3 0.58 3e+02 2.0 1.3 29 51 176 198 171 200 0.59

Sequence Information

Coding Sequence
ATGAGTGCTCCAATCATCATCACAGTGCCCAACAGCTACCTGGCGTTGGACGAGGACTCCAACCAGAGCATGGAGTCCTCCCTGCCGTCCAGGAAGCGAAGGCTTGACCATCTCTCATGGGAGGAGAAGATGCAAAGAAAGAAGCTAAAGAACCGCGTCGCGGCGCAGACGTCGCGCGACCGGAAGAAGGCGAAGATGGACGAGATGGAGCACCGCATCGAGCACCTGGAGGAAGTGAATGAGCGGCTGGTGAGCGAAGTCGCGAGCCTGAAGGCGCTGAACGAGAGATTGTTGGGAGAGAACACTACGCTACGCAGCGAAGCCGCGGCGCGGCGCGTCCCGGAGGCCCCACGACCAGCAGAGTCGAACCCTCAGCAGAAGGAGGGGCCCCCGGCGGCGCACCGCGCGGCGCGCCTGCTGCTAGCGATGTGCCTCCTCTCGCAGACATCCTCGCGCACCTCGACTCCGATGAGTACCTCGACACCCTCAATCAACTGGCAGAGTCCCTCCTCCAAGAAATTGATGCAGCTGCTCCAGGAAAGGCTCAAAATGAGCCAGCCGAACAGCAAACTAGACAATGCACTGAAGGAGTTGAAGTGGTGGGGCCCACAGCAGAGCACCTGGAACCCAGTGGAGGTGCAGTCCTAG
Protein Sequence
MSAPIIITVPNSYLALDEDSNQSMESSLPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEHRIEHLEEVNERLVSEVASLKALNERLLGENTTLRSEAAARRVPEAPRPAESNPQQKEGPPAAHRAARLLLAMCLLSQTSSRTSTPMSTSTPSINWQSPSSKKLMQLLQERLKMSQPNSKLDNALKELKWWGPQQSTWNPVEVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2