Xsyl009301.1
Basic Information
- Insect
- Xylota sylvarum
- Gene Symbol
- ZBTB41
- Assembly
- GCA_905220385.1
- Location
- LR999957.1:150937770-150950369[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 3.9e-07 4.7e-05 24.2 1.0 1 23 130 153 130 153 0.97 2 21 2.5 3e+02 2.8 1.0 1 23 269 291 269 291 0.95 3 21 0.00032 0.038 15.0 1.1 2 23 316 337 315 337 0.97 4 21 0.0016 0.19 12.8 0.3 1 23 343 366 343 366 0.97 5 21 0.00022 0.027 15.5 1.4 1 23 378 400 378 400 0.98 6 21 1.2 1.4e+02 3.8 2.8 1 23 422 444 422 446 0.91 7 21 0.0027 0.32 12.1 1.8 1 23 450 472 450 472 0.98 8 21 0.00012 0.015 16.3 4.3 1 23 478 500 478 500 0.97 9 21 0.34 41 5.5 5.1 1 23 506 529 506 529 0.96 10 21 1.9e-05 0.0023 18.9 3.6 1 23 668 691 668 691 0.98 11 21 0.15 18 6.6 2.5 1 23 718 740 718 740 0.94 12 21 0.018 2.2 9.5 1.6 2 14 753 765 752 771 0.86 13 21 0.22 26 6.1 1.5 1 23 780 803 780 803 0.95 14 21 0.0073 0.88 10.7 2.5 1 23 816 838 816 838 0.98 15 21 0.0056 0.68 11.1 3.1 1 23 860 882 860 882 0.98 16 21 1.9e-06 0.00023 22.0 0.7 1 23 888 910 888 910 0.98 17 21 0.00042 0.05 14.7 7.4 1 23 916 938 916 938 0.98 18 21 0.26 31 5.9 1.3 1 23 944 967 944 967 0.96 19 21 0.057 6.8 7.9 0.8 1 23 1358 1380 1358 1381 0.96 20 21 1.9e-06 0.00022 22.0 1.4 2 23 1399 1421 1398 1421 0.96 21 21 6.1 7.3e+02 1.6 0.2 3 23 1485 1505 1484 1505 0.88
Sequence Information
- Coding Sequence
- ATGAGTGATATTCGCTGCAAAGAATGCAATgaAATAAATGATTGCAACTCGTTTAAATGCGAAAGTTGTAAAGCAACCCTTTTCGATGGTTCTGAGATAGACGAGTGCGAGCATGATTATCGTTTAATCGAAGAAGCTGAGTTAAAGGGAGAGGTATACAAATTGGAGATAGTCGAAGATGAGAATCGTCTCCTGGAAGATGTTCCTGTTGATGAAGATTTTAGCattaaattggaagaagatgtGAGTACCGACAGCATCACCCAGGGAAATGGGCGAATTCCAAATGGAAAAGACATAAACAAAGAGATTTTACGAACTGAGCTCAGGAAGGATACTCAATCCATTACcacagagaaaaaacaaaatacaaattcatcGGCAGCATACCAATGCGACGAATGTCCAAAAAGcttTAAGAGAAAAGCTTCGCTGAAAGCACACTTTAACCGAATACATAGTCCAGATAGTTCGAGTACATGCTTTGATAGCATTCCATTTGAAGACAATAAAAAATCCAAATCTAATTCCATGCATACTCGTATATCGTCGCCCACATTTTCGGAATCCTACGACTCGGATTATGAACCTCCGGAGGAAGATTCGCTATGCAACACCAGTGCTAAGCAATTAAAATCACCAGGCAAAACGAAACGAATACTCGAACAAATGTCCGATGAATCGGACTCCGAAAATAATAAcccaagaaaaaaattatcaactagGTGTAAAATCAAAACCAGCCCTTCTCAGACTTTGTCGGACTTGAAGCAGAATGCGCCCACTTTGAAGCGTCATATGGTGTACAAGTGTACAGCGTGTGAGAAAATCACCAACGACTACAAGGAGCATTTAAAACATATTGCTATACACGAAGCGCCAGTGGATAGTCTCACCGAGACAACGTCTCTAGAAAAACTCAAGAAAGCTCCGAGTGgttttctaaaatgtaaacaGTGTGAAGAAGTCTTTATGACGGAGCGTGATTACAAAACTCATATGAAGATACATAAAGCGGAAAAAGTCTTCCAGTGTGAAAACTGTGAGGCTCTATTGGTCTCTCAGTCTTCTCTGAGGAAACACATGATAAGGATGCATAATAGAAAACCCAAAGAAGACAAAGACAAACACTACGACTGTAACATATGTAACGAGAAATTTTCGGCACAAATTCTGTTGATACATCACAGGAAAACGCACATGGATGTGATTAAGAAAATCGAGGAAATGACACTCATTGATAGGGCTGGAAGGAAACCGATTTATGTGTGTAAAGTATGCGCTAAGACatcgaaaaataaattcagacACGAAGAGCATTTAAGGATTCACACGAAAGAGAAACCCTTCAAGTGTGAGCAATGTGATACAAGAGTTTCGACATCGAATGCTATGGCACATCACCGGCGTTTGCATGAGAACGATAGGCCGTTTAAATGTAACATCTGTAAAGCAACTTAtcgtcataaaaaaagtttaaagaagCACTTAATTCTGCATACTGGTGCGAAACCCTTTAAGTGCCGTTATTGCGAAAAAACATACGCCTTCAATTATACAAGAGCGAGTCATGAGCGTAACTGTCATATAGGCGATGCCAAGACACGTCAGCGACGTGGACGTATAGGCCCAGCCAGTGAAGGTGAGGGTAATAATGAGACTGTTGAAGAGGGTACTATGGAGACTATGGAAAGTGACTGCAACACTGCCAAGTGCGAGCACTGTAAGACTGTCCTACTTAAGGAAAATTGTACTGTCAATGAAGAATGGGAAGATGATTTCCGTTTCATTGAAGAAGCAGAGTTAAAAGGCAACGTCTACAAACTGGGAAGCTCCGACGGGAACTTTTTCAAGGTGGAACCCTGCGAGGAGGGACACATCATCCAGGGTATTAAAGAAGAACCAGAGTTTCAGATAGACCCTGAAATCGTTGATGATGAACAAGCAGTGGCAGTGAAACGAGATATCGGAATCGAAGCTGACCAGACGGCCCACCGGCAATATCAGTGCACCGAATGTTCAATGTGTTTTAAACGAAAGGCATCACTAAGAGCACATTTTAATACTGAACACGTTGAAAGTGGTTCCGATTCAGAACGACCGATTGTGAAAAAGAAGTCACCGCAGGCAGCAAAATCCAGGGTTAGAGCGTACAAATGCGAGATTtgtcaaaaaatgacaaagaactATAAGGAGCATATAGATCATGTTCAATCACACAAACGTTTAACGAACAGTCTTGCAAGTGGCCTTATAAAATGCAATCATTGTAATAAGACGTTTTCGAATAATTTCGACCATAGCATGCATCGAGATCAACTGGAATGCATGAAGGGACATCAGTGCAATATCTGTAAAGCCTTTCTCTCCAATAAGGGTATcctaaaaaaacacaaagccCGGATTCACAACGAGAATATAGATAACGGATCCAAGGATAAAAAGTACCGATGTGtattttgtaatgaaatGTTCCCCCATCAAATACTAATGACCAACCATAAGAAAATGCATGTAGAAGATAACAAATTCATAGAAGAATCCGCAATCATCCGAAGAGTCAATGGTCGACTGACATATGTTTGTAAGACGTGTGGCAAATCATCGAGTAATAAATCGCGACATACAGACCACCTTAGAGTACACACCAAGGAGAAGCCATTTAAATGCAATTTATGTGGAGCAAGATTTACGTCCAATAGTTCGTTAGTCCAACATTTACGTTTGCATTCAGATGAAAGGCCCTTTAAGTGCCACATATGCGAGGCAACCTATCGTCACAAGAGAAACCTAAGAAAGCATTTGTTTAAGCACACGGGCGCGAGACCTTTCAAATGTGAATACTGTATTAAAACGTTTGAATTAAAGACCACCAAAAACGATCATGTACGGCTTATACACACTGGTGAGACTCCCTATCAATGCGAGATCGACGAAAGCGGTGAAATTTCCGGTAACATTTGCTGGGACTGTGAGGATACGCTGCTCGGTTTTCACAAAAGTGTTGGCGAAGATAACGAAGACGAAGAGGAGCCCGTGGTTGTTGATGACGACGAAATCCTATACAAAAGCCTCGAGAAAACAAGACGCATTCATTGTTTATCGAAAGAAGTTGAAATTATCCAAATTGACTCTTCTGATTCGGAACATGAGGAGCGTGTGACAGTGCCCAAAGCAGACGAAATTGTTAGAGTTGAATCGGCTAGTACGGTTGTTGGGTGTTCGGGTAAAAACTGTCGAAGTGCAGCTGTGCTGAATAATATTGTTGCTGTGAAGAAGAATACACTCAAGAAAATGAACAGTGACGAGAGGATGAAGAAAGAAATCTTCTCCAGAGGTAGAGTTTTCGAAAGTATGAGATGTCCACTTTGTCCATATTTATCAGGTATCGAGTACGAGGTGGTATTTCATATTCGTCAAACTCATCCACACTACACGGGCGAGCACTTACGTTTCGAGCAGAAGGAGGGCGACTTAACTCTAACCAGGAGGATTATATTCGTCCAGTTATGGACATTTTTCGAGTGCAAAGCGTGTGGCAAAATCCATGACAGATTTTGGCCCCACAGAAAACATATCACATCCCACGATCGGAAATATCCTAAAAATTCATGCGATGAGCGCATTGCTAAAAATAACAACGAAGTATTCATCTCTCATGATCGCAAGAATAAAGTTCAAACCTCGAAACGTGCCTTAGAATCTGTAGCAGACAACAGTGATGTAAAgtatcccaaaaccgataaaCGTGTCTTGCGGCGAGGCTCCAAAGATAATAATTCAATAACTGAAACGTTGGTCGTGAATGTcccaaaatcttttcaaaatcttcCGAAGAAACAGCCGCAATGTCACAGTGTTAATAAGAAATCCAAATCTCAGGGTCTTTTGCGAAAACAACAGATGTTGCAAGCCAAGCGGGAGCGAAGGCACCAAAAACTAACAGTGGGTAAGTTAGCTAAATTAAAAACTAAGCCCGCGGAGGTGATTCCGAAGCCAACATTCAAAATGCCGCAACAACCAGCTCCACGTGCCGCTTCTGTAGTTAAACAATTCTTACACCACCCTCGGTTCACGTGCAAGTTGTGTTCAGAAGTCTTAACCAGCTTTATTGCCTGGAATATGCACATGATTCGCCATCATTCTGCAGTAGAGTTCCAGACTGACTCAATGATAACCGATCCACCTAataacaaatgcaaaaaatgtGATAAAAGTTTCACAAGCGCGATTAACTTACGCATGCACATCCGCCTTTCGCATCGGCGTAAGAATCGACTTGTTGAAATCAATGGAAATGACAACGAGGAAATATGTCGTCAGACACTGACGCCAAAAAAAGAAtccaaagaagaagaacaacaaCCGGGTAATAGCTTATCGCCGCTTCTCGATATGGGGGTTTCAATAGTGCCGGAAGCACCCATCCCTACCTCGACCAGTGCCTTATTGTGTCAATACTGCGGCACGCTGTTTGCTGCTTTAGCAGCAAAGAAAACGCATGAATCCAGTCATGCTATAAACGCAGACATTAAGCGAATTTTTAAATGCAAGTCACAAgcataa
- Protein Sequence
- MSDIRCKECNEINDCNSFKCESCKATLFDGSEIDECEHDYRLIEEAELKGEVYKLEIVEDENRLLEDVPVDEDFSIKLEEDVSTDSITQGNGRIPNGKDINKEILRTELRKDTQSITTEKKQNTNSSAAYQCDECPKSFKRKASLKAHFNRIHSPDSSSTCFDSIPFEDNKKSKSNSMHTRISSPTFSESYDSDYEPPEEDSLCNTSAKQLKSPGKTKRILEQMSDESDSENNNPRKKLSTRCKIKTSPSQTLSDLKQNAPTLKRHMVYKCTACEKITNDYKEHLKHIAIHEAPVDSLTETTSLEKLKKAPSGFLKCKQCEEVFMTERDYKTHMKIHKAEKVFQCENCEALLVSQSSLRKHMIRMHNRKPKEDKDKHYDCNICNEKFSAQILLIHHRKTHMDVIKKIEEMTLIDRAGRKPIYVCKVCAKTSKNKFRHEEHLRIHTKEKPFKCEQCDTRVSTSNAMAHHRRLHENDRPFKCNICKATYRHKKSLKKHLILHTGAKPFKCRYCEKTYAFNYTRASHERNCHIGDAKTRQRRGRIGPASEGEGNNETVEEGTMETMESDCNTAKCEHCKTVLLKENCTVNEEWEDDFRFIEEAELKGNVYKLGSSDGNFFKVEPCEEGHIIQGIKEEPEFQIDPEIVDDEQAVAVKRDIGIEADQTAHRQYQCTECSMCFKRKASLRAHFNTEHVESGSDSERPIVKKKSPQAAKSRVRAYKCEICQKMTKNYKEHIDHVQSHKRLTNSLASGLIKCNHCNKTFSNNFDHSMHRDQLECMKGHQCNICKAFLSNKGILKKHKARIHNENIDNGSKDKKYRCVFCNEMFPHQILMTNHKKMHVEDNKFIEESAIIRRVNGRLTYVCKTCGKSSSNKSRHTDHLRVHTKEKPFKCNLCGARFTSNSSLVQHLRLHSDERPFKCHICEATYRHKRNLRKHLFKHTGARPFKCEYCIKTFELKTTKNDHVRLIHTGETPYQCEIDESGEISGNICWDCEDTLLGFHKSVGEDNEDEEEPVVVDDDEILYKSLEKTRRIHCLSKEVEIIQIDSSDSEHEERVTVPKADEIVRVESASTVVGCSGKNCRSAAVLNNIVAVKKNTLKKMNSDERMKKEIFSRGRVFESMRCPLCPYLSGIEYEVVFHIRQTHPHYTGEHLRFEQKEGDLTLTRRIIFVQLWTFFECKACGKIHDRFWPHRKHITSHDRKYPKNSCDERIAKNNNEVFISHDRKNKVQTSKRALESVADNSDVKYPKTDKRVLRRGSKDNNSITETLVVNVPKSFQNLPKKQPQCHSVNKKSKSQGLLRKQQMLQAKRERRHQKLTVGKLAKLKTKPAEVIPKPTFKMPQQPAPRAASVVKQFLHHPRFTCKLCSEVLTSFIAWNMHMIRHHSAVEFQTDSMITDPPNNKCKKCDKSFTSAINLRMHIRLSHRRKNRLVEINGNDNEEICRQTLTPKKESKEEEQQPGNSLSPLLDMGVSIVPEAPIPTSTSALLCQYCGTLFAALAAKKTHESSHAINADIKRIFKCKSQA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -