Xsyl017334.1
Basic Information
- Insect
- Xylota sylvarum
- Gene Symbol
- dnajc2
- Assembly
- GCA_905220385.1
- Location
- LR999959.1:28298481-28300416[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.012 20 6.0 0.0 8 31 426 453 420 459 0.81 2 2 9.8e-12 1.6e-08 35.1 0.2 2 41 542 585 541 589 0.91
Sequence Information
- Coding Sequence
- ATGCAGATGTCTTCGCAGTGCTGCTGTGTGCCATTTAATCTCACCTCTAAAGAAGTTCAACGCGTGGGACTTAGGTTTCAAATATTTGCTGGACGTCATGATGACCCGAGGAGAACTAAATCTGAGATTTTAGAAAAGTGGGACTCAGATGAGTTTATCGCTGATGTTAACTATTTGAAATCTCTGGATCCAAAAGAATGGAAAGATCAAGATCATTATTCAGTTTTGGGGTTAGGTAATTTAAGATATAATGCAACGGATGATGATATAAGACGTGCTTATAGAAAAATGGTTTTACAACACCATCCTGACAAAAGGAAATCAAAGGGCGAAGAGGTTAACGCAGATACTGATTATTTTACTTGCATTACCAAGGCATATGAAATATTAGGCTCTCAAAAAACAAGGCGCGCATATGATTCTGTGGACCCCAAATTTGACGATTCTTTACCAACACAAATGGAGATAGAAAGTAATTTTTATGGGACATTTCAgaagtattttaaattaaattcaagatGGAGCGAACGAAAAAGCGTACCATCTTTTGGAGATGAAGAAGCCCAAAGGCTTGATGTTGACAACTTTTACAGTTTCTGGTATGATTTTGAGTCTTGGAGAGAGTTTAGTTATCTCGACGAAGAAGACAAAGAAAAAGGACAAGATAGAGATGAACGGCGTTGGATtgagaaacaaaataaagttgCACGTATTAAgcgaaaaaaggaagaaatgtCTAGAATTCGCTCTTTGGTCGATTTAGCGTATAATAATGATAAacgaattattaaatttaagaacGAAGAGAAACAGAGAAAACTGGCATTGAAAAGAGCAAAAATGGATGCAGTACAAGCACAGAAAGAGGAATCGGAACGTGCTTTGAAAGAAGCCCAACTAGCTAAAGAAAAGGCGGAAAAAGCAGAACagaaaagaattgaaaaaattcgACTTGAAAAAGaacaatacaaaaaagctattaaaaaggaaagaaaaatattcagagATAGAGCGAGGGAATCGAACTATTTCTCTTCAAACGATAAAGACGTGTTACAGAATATGGAAGGTGTAGAAAAAGTGTGTGAAATGCTTACCTTAACTGAactacaaaatataaacaaagatATCGAAGGCAATACACAAGTATTTTTTGATGTGTTGCAAAAATTAGAAAGCAAGATCTGTAAAGATCGAGAAGAAATCTCTCAAACAAAATATGAGAACAAATCCGAGCTAAAGATATTAAATAAAGATGACTTGTGGGCAAACGATAGTATTCAGATATTAATAAAAGCAGTTAATCTATTCCCAGCGGGAACTGCTCAAAGGTGGGATGTTATTGCAACTTTTATGAACCAACATGCTAATAATGAGAGCCAATATACTTCTAGAGACGTGCTAAGTAAAGCCAAATCTCTACAACAAAGTGACTTTTCTAAAAGCATATTAAAAACGGAAGCGAATGACGGAGCAtttcaaagttttcaaaaatcaaaaaaggaaattctggTTGTTCCGGATAATGTATTAACTAATAAATTCGATGAAACTGATACCAATGAAGTCAAGAGCAAATCAGACGCGGTGGGGACAAACAAGAACTTTCAAATTTCATCCCAAAAAAATTGGACTAAAGAAGAACAAGCTCTTTTAGAGCAAGCTATTAAGTCATTCCCTATTTCTACACCAGATCGTTGGGATAGAATTGCTGAATGTATTCCTAATAGGAGTAAAAAAGATTGCCTACGGAGAGTTAAAGAGCTAGTCGATTTAGTGAATTCAAAAAAAGATGCTAAATTGGgtacaaaataa
- Protein Sequence
- MQMSSQCCCVPFNLTSKEVQRVGLRFQIFAGRHDDPRRTKSEILEKWDSDEFIADVNYLKSLDPKEWKDQDHYSVLGLGNLRYNATDDDIRRAYRKMVLQHHPDKRKSKGEEVNADTDYFTCITKAYEILGSQKTRRAYDSVDPKFDDSLPTQMEIESNFYGTFQKYFKLNSRWSERKSVPSFGDEEAQRLDVDNFYSFWYDFESWREFSYLDEEDKEKGQDRDERRWIEKQNKVARIKRKKEEMSRIRSLVDLAYNNDKRIIKFKNEEKQRKLALKRAKMDAVQAQKEESERALKEAQLAKEKAEKAEQKRIEKIRLEKEQYKKAIKKERKIFRDRARESNYFSSNDKDVLQNMEGVEKVCEMLTLTELQNINKDIEGNTQVFFDVLQKLESKICKDREEISQTKYENKSELKILNKDDLWANDSIQILIKAVNLFPAGTAQRWDVIATFMNQHANNESQYTSRDVLSKAKSLQQSDFSKSILKTEANDGAFQSFQKSKKEILVVPDNVLTNKFDETDTNEVKSKSDAVGTNKNFQISSQKNWTKEEQALLEQAIKSFPISTPDRWDRIAECIPNRSKKDCLRRVKELVDLVNSKKDAKLGTK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01253834;
- 90% Identity
- iTF_01541376;
- 80% Identity
- -