Xsyl011842.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xylota sylvarum
Gene Symbol
Mblk-1
Assembly
GCA_905220385.1
Location
LR999958.1:58168623-58201109[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-14 6.4e-11 42.4 0.1 1 44 350 394 350 395 0.92
2 2 1.1e-18 2.8e-15 56.3 0.0 1 43 860 903 860 905 0.95

Sequence Information

Coding Sequence
ATGGGCAAGTTCGCATCCATTTTCCAACTTGAGGTCTCCTATGCCCTTGAGCTATATTGCTTAGAACGGGTTGCTGAGGAGTTGATGGGACGCAGGAAATGGAAGCAATATCAAGAAGCTTTATCGCGATCCCAATTAAGTGCAGATATCACAAATCTAGATCAAATCGATATTTCAAACCAGAAATACGAATCCGAACAAAAACTGGAGAAGGCCAAGGAAAATTCACATCAGCCGCAGCAACAGCAACCGTTCGAAAACGACgttccaaaaatcaaaaccGAAGTTATCGACGTGAACGAAAGAACTTCAATTTCGCCGCACATAAAAAAAGAAAACTTCGAAAGCAATTTAGTAGTAACGGAGGGAAGCATAAAACTTAATAATAATACAACTACATCACATAGCattcataataataatagtaaaaagGATAACGAGGAGTTGCTGCCGCCACCCACCAGCCcgacaccaccaccatcaaTACCCATCGATTGGACACCGAATGAAAAGTGTAATTTTTGTGTTGACGGTAAACTGCTCACAGTGAACGAGAAGGGTGAATTAGTGGCCGAGTCAAGCCCGGCTTTGTCCGAGGCAGACCTCGCCAATAGAccaCCAGGAGATACGGACAGTGACTCTAGCGATAGTCTGGTACCGGATGCTAGGGTCAATGCGAGTAAAGTACTAACACCACGCCTAAGAGATTCAGTTCCACCGAATATGACCTCATTTGAGTCGATGGCAGCACAATGGACAGCAATTCAATCATTACCGGGACTACCGTCAAGCTTAGGGCAATTCTATCCAAGCATATTGTACAATTTAACTCAGCAAGTGAACTCGGCCACACCAACTACCTCAGAGACATCGGCCGCCGCTATAAGTCCCTCACTCAAGGGTTCTCCCAGTCCCAGTGATTTAACGGGTGAACAGCCATTAGATCTTAGTTCAAAACCATCACCAAATTCCTCAATCGGTGGAGATGCAAGACATGTGCACCGAGCGAAACCCCGTGTAACACCATGCACGGGTCGTCGCGCCTACACCGAGGAAGAACTAAACAATGCACTGCAGGACATCATCAGCGGCAGGCTGGGTACACGTCGCGCAGCTGTTCAATATAACATTCCACGTTCCACGTTGCGCAATAAAGTGTATAAAATCTCATCGGGAGCGAAGCGTGAAACACCCACATCACTGCATCATCCGGTTAGTCTTGAGGATCTGGCCGATGCTGATGATGACAAACAAGATCTATCAGCCGACGAGGAAGACAGCAGTGGTGATAAATTTCCGGGCAGTTCCTTAGCGTCACACGTAGGCGATGATCTTGCCAGTCGTTTTGCCGATGCGAATCTTGCGGCGAGTATTCAAAAAATCTGCGCCGAACAAAATAGCCTAACGtctcagcaacagcagcagcagcagcaacagcaccaCCAGCCGCATAGTGATATTCAAATCCATAACAAGCCGACAACATCACTAGAGTCACAGCCGAAGCGAAAAGCTTCAACACCACAACCTCCGCCGCCACAAACATCACCGCATCACCACCCCAATATCTTACAGAGTGCGATGCAGAGTGTACTGCTGCAGCGTTCTTTGCTATCGGGCGGTATTCATACAAATTTAGAAGAAGCAGTTCTTCAAATGTTTAATGCCTTGCTGATGAATCAGGATGCAAGTTTGATAAATCCTCAATTGTTAATGCAACTGCAGCAGCCGCAACGGTCGCCACAGTCAGCACAgcagcaacaccaacagcacCTGTATCCCAGTAATGCGGGAGGACATCCGTCGACAGCTGCAGCTgtagcggcagcagcagcagcagcatccttTCAAAATCGTCAACCAAAGTCTGAAACACCAGAAACTGCATCTTCAGTGGACCTGAACGAGACGCTAGGTGATGATCCATCAGTTATTCTAAAAATTCCGTCCTACAAACCGGTAGCTGGATCCTCAACTTTATCAACAtcttcagcagcagcagctgttgcagcggcagcggcagcggcgTTATGTAACAACAAGAATGGTGAAAATTTGCCATCAAGTTCGCCAAAAATTCCCACAGCGTCCGCTCTGTTGGGTGCCAATACCTCAACGcaacatcaccaccaccacctgcaTCAGCATCACAATCCATCGGCGGCGGCTGTCAATAATATACCCGGCATGTCGTCACCTTTGATACGGCACGCAAGTGGCGAGTCTCAGTCACCACCAACTCTGTCGCTGCGTGAAGTTATCGCCAACAGTATAAGCCGAACTTTTAGTCAACAAGCAAACAAAGACGCCACCAGTCCAAGCCCTGCTCACTCATCATCGTCGGCGGTGGATCACAATGACCAGTACAAACGGCCCAGCATATCAGTGATTAAGAACATCGGGGGTACCGACACTTCACGCTTTGCCACCGCACCAAATGTACTCGGTGCTCATCACAACTCCaatcaccaccaccagcagcaccatcatcatcagcatcacagCCAAAATGCGGCAAATAATAATCTGGCTGGTGGCAAGGGTACCCGACCCAAGCGTGGCAAGTATCGCAACTACGATCGTGACAGTCTTGTCGAAGCTGTAAAGGCGGTGCAACGCGGTGAAATGTCCGTTCACCGTGCCGGCAGTTACTATGGCGTCCCTCACTCGACACTCGAGTACAAGGTCAAGGAACGCCACCTAATGAGGCCTCGAAAGCGTGAACCCAAACCACAGCCACCTCTCGACGATCGGACGGGAGGCGGCACGTCGTCTGCGAATACTTCTGGCTCCACGGCGAACACCTCAAAAAACTCAAACATTCCAGGTTTATCGGCTGTAAATAGTTTAGATAAATTGAGTAAGAGCAGCGGCGCTGCGGGTAGCAACCAAAAACAGTCGGCCGCTGGCAAGAGCAACCCACCATTCCCTACGACATCACCAAATGGCATGAAAATACCGCCGACGTTATTCGAGCCCGGCCTCGCCGCACAGATGCCGTATGCGCCACACCTCTTCTGGCCCGGTGGCTTCGGACACCTACCAATGGATTTCAATTCACGGTCACAAGCAGCCGCAGCCGTTGCTGCAGTTGCTACAGCCAGTGGTGCCGGCAATCCTTCATTTGCCGCTGCCAATGCTGAGCTATTTAAATCGCAAATGATGCAGAGATTCCACGAAGATCGAGGAGCCCCAAATCCCATTGGCAGCCCGCCTGCGCCTCCAGCCCTAAGCAATtcaaccagcagcagcagtaccaACAACAGCAAAAGTGTACGCGAAATCGCTGAAAACCTCTACGACACTACCGGAGCGAATGGTTCCTTTTTAGATGGCATCATCCGCAAGACACTAGACCGCAAGAGTTCCGACATAACACAAGGCGCCTTACTAGACCAACTGGTTAAAAACAGCAAACCACCTCCCCAGCGACTCATGATGAACAATGAACGCACCACGGGAGATCTTCTGAAGCTGAAACGTTCCGGCAGCCCAATGCACTTTCATCCAGCAATGGAAATCAAACGTGAACGCGCCAGTCCAACGTCCGACTCGTCGAACAGTGATTCAGATCGCAATCACAATCGCGACACTGATTCCGAACCACCATCATCACATCATACGCTTGGATTGCATCACGCATTACTCAACGTTAGCAGTGATCTAAATGGCGCTCAACACGGACTTGCCGGCCAGTTGACGGGCTCCGAAAACAATCTGGCCGCGTCATCGTCCTCCGTGGTGACTACCAGTATTCTGCACGATAAATTGGGGCAAATCAAGTCCGAAACGGACGATAGTTTATAG
Protein Sequence
MGKFASIFQLEVSYALELYCLERVAEELMGRRKWKQYQEALSRSQLSADITNLDQIDISNQKYESEQKLEKAKENSHQPQQQQPFENDVPKIKTEVIDVNERTSISPHIKKENFESNLVVTEGSIKLNNNTTTSHSIHNNNSKKDNEELLPPPTSPTPPPSIPIDWTPNEKCNFCVDGKLLTVNEKGELVAESSPALSEADLANRPPGDTDSDSSDSLVPDARVNASKVLTPRLRDSVPPNMTSFESMAAQWTAIQSLPGLPSSLGQFYPSILYNLTQQVNSATPTTSETSAAAISPSLKGSPSPSDLTGEQPLDLSSKPSPNSSIGGDARHVHRAKPRVTPCTGRRAYTEEELNNALQDIISGRLGTRRAAVQYNIPRSTLRNKVYKISSGAKRETPTSLHHPVSLEDLADADDDKQDLSADEEDSSGDKFPGSSLASHVGDDLASRFADANLAASIQKICAEQNSLTSQQQQQQQQQHHQPHSDIQIHNKPTTSLESQPKRKASTPQPPPPQTSPHHHPNILQSAMQSVLLQRSLLSGGIHTNLEEAVLQMFNALLMNQDASLINPQLLMQLQQPQRSPQSAQQQHQQHLYPSNAGGHPSTAAAVAAAAAAASFQNRQPKSETPETASSVDLNETLGDDPSVILKIPSYKPVAGSSTLSTSSAAAAVAAAAAAALCNNKNGENLPSSSPKIPTASALLGANTSTQHHHHHLHQHHNPSAAAVNNIPGMSSPLIRHASGESQSPPTLSLREVIANSISRTFSQQANKDATSPSPAHSSSSAVDHNDQYKRPSISVIKNIGGTDTSRFATAPNVLGAHHNSNHHHQQHHHHQHHSQNAANNNLAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPPLDDRTGGGTSSANTSGSTANTSKNSNIPGLSAVNSLDKLSKSSGAAGSNQKQSAAGKSNPPFPTTSPNGMKIPPTLFEPGLAAQMPYAPHLFWPGGFGHLPMDFNSRSQAAAAVAAVATASGAGNPSFAAANAELFKSQMMQRFHEDRGAPNPIGSPPAPPALSNSTSSSSTNNSKSVREIAENLYDTTGANGSFLDGIIRKTLDRKSSDITQGALLDQLVKNSKPPPQRLMMNNERTTGDLLKLKRSGSPMHFHPAMEIKRERASPTSDSSNSDSDRNHNRDTDSEPPSSHHTLGLHHALLNVSSDLNGAQHGLAGQLTGSENNLAASSSSVVTTSILHDKLGQIKSETDDSL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01223304;
90% Identity
iTF_01541360;
80% Identity
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