Basic Information

Gene Symbol
Arid2
Assembly
GCA_905220385.1
Location
LR999957.1:35406506-35419447[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-24 5e-21 75.5 0.0 2 89 42 127 41 127 0.95
2 2 8 2.7e+04 -4.0 0.0 31 47 1732 1750 1725 1773 0.55

Sequence Information

Coding Sequence
atgtCAACAACAGAATTAATACAATCGGCTGTGCCACTACCAGCACAAACCGACGATAGCGTGACCAATAATTGCAAAGCAGCGGCATTGCGTAGACCCCTGCGCATCGAACCCGAACAAGATCGTGAGACATTTTTCCGCGCTCTACAAAGTTTCCATGAATCCAGAAACACACCAATTACACGCCTGCCGAAAATCAATGGCCAGGAGGTTGATCTGTATGTATTGTACAGCGAGGTCATTAACCGTGGCGGTTGGCTTAAGGTTAACATTCGCAACGAATGGGATGAGCTGGTCCCTTCGGTGGGATTCCAGCAACGGTGTGTGAACGCGGCTGTAGCAATTAAAACCATTTACACAAGGTATTTGGACAAGTATGAGAGATTGCACTTCTTGGGGGAAGATCCCGACAAGACGGATGATTTGGATGACGATGGACGACCAAAGAAGTGGTCCTCGAAGACGTATAATTCGATACCAATGACCTACAATTACAAACAACACGAGCTAAACGAAGAGCAAAGAAATGCAAATCGAATGTCCGAGGACCTGTACAAGGAATCGGAGTACGATAAGTTGTTACTTTCATTGATATCACCACTTCCAAATGAGCAGGATTTTGCCATCAACGTGTGCACACTGATGTCTAATGAGAGCAAGCACACACTGAAGCTCGATCATTGTCCGAAGTTGTTGGATGCCCTGCTGGCACATGCCGGAGTTTTTTGCCATTACACTATGCGGGAACTGTTCCAAGAGCTCTACACCAAGGTCCGCAGACACTCACTGCAGTCATTCTGGAAGGATCTCTTGCATGACAAGCCACAAATTCTGGAGCTTTCGTTCGATGATTACTACCAGTCGGCCGATGAGAAATATAGTGAGACAGCTGTGGTTGATCTGCCGTTTCGCCTGTTGCAAAGTGAAAACTTCCAAGATGGACTTAATGCCGACAGGGACGACGTGAATATGTGCGATCTAAATGCATTGGATTTCCTGGCTCTGGGCCGAGGATTGGGCACTCAGGAGTACATCGGTCAGAGGGTCCATCAAATAGCATCGATCATAAGAAATCTCAGTTTCTACGATGAAAATATAACAGTTTTGGCAAGGAATCGCACTTTTGTACGATTCTTGGTGATGGGCTCGAACATCCGTTGGGGGAATCTGCATCACATGGTGTTGGATGTATTTGGCAACATTGCCACGGAATTGGAGCTGCAAGATCCCACGCTGGACGACTTGACACGGTGCTTGATGTCGACTGTGTGCGAAGGAATAGAGAGCTCCGATCGAGGAGTTATCATTAGTTGCCTGGAAGTACTTTACAAGGTTTGCCAACATGATGACAATGAGGAGCACATACACAAGTGCTTGAATCAGAGATTGTACAACACACTTTGCTTGTATTTATCGCTAAACGATATTATGCTGCTATTGTATACGCTAGAGGCCATCTACGCACTCAGTTCACTGGGACATCGAGCTTGTAATTCACTTGTGCAAGTGAAGGGAGTCATCAATTCGTTGATGTCGTTGATAACCGTTGAGgcACAATCGTATGGACCAGATGGATGCATTCTGATGAGAGTTGTGGAAACAGTTCCTGGAAACATGTTACCAATGGTCGCCCAGAACATTGCTAACATTGCAAATCTACAGAACGCCATTCATACTCAGCAGCCAATACAACAGCAAGAATCCACTGCATCTGGACAAGGTGCTCAAACAGCTTCTCCAGCACGTCTAAGTCAAGACTCAAATTCCCAACAAGGAACAAAGTCGCCAAATCCTTCGCAGCAAGAACACGAGCAATTCGCTTTATCCTGGCTGAGTGCAACATTTGAACCAACCTCTTCCCCAGATAGTCGTGTCGAACAGCAAGAACTCTATCGAATGTACCTGTCGGCAACACAAAAATGTGGTCGACGAGGGATTGTATCCCATATGCAATTTCCCCGAATGGTACGTACGATTTTCGGAGCGAATTGTGGACCTACCTCTGTCAAGAAAACTGAAGGTGCCGACAGTAATAAAATCTACTACGTCTGCATTCGTGTTCGAGCCAATCCACTACCGATACAAATGAAAGTCCAGTCACCACAGAAGGGCTTAAAGGAAGGCAAACAAAAAGTCGAACCAGGCTCTgttaagaaaacaaagaaaagactAAAATTGCAGGAACAATTGAAGCaagaacagcaacaaaaacagcCACTACCAACGTTGGCAAACACAATAGGTAATCAACAACAGACCGCTACAGTTGTAAATCAACAGCAAGTGGTTGCAAAGATCGAGGCTATTCCACAGCAAcatgctgttgttgtacagccACAACAGCCTCAAATTTTACAACATCACGTGCCCAATACGGTGGCGAAAATGGAAGGACAACCCGTATTGACGTCATCAAAACTGCCTCTTTCTACGCAGGTCTCGAAAATTCCTAACACAGCTCACCCTCAGTTAATTGGAAATGTATTAGTCACCCACACTCCACAAGCaactcttgttcaacaatcGCCCACCCCTGTCAAAGTGACGACAATTGCAGAACAGCCACAAGTCGCTCAACATATCATACAAATGCCGTGCACAtcgcagcaacaacagcagatTACACAACAAATTGTCTGTAACACTCCATCGACGTCATCGAATGGTGGTAATGGTGGTACACAACCATCTTCGTCATTAATTAAAAGCCTATTGGCAAATAAGGTAACATCTTCCTCCACAGCTACAGCTATTACTACTACCAATACTTCTGCTACTACCAATGCCAATGTCCCTGCTGCTGTTGTAATCGATACGAATGCGAGTGCAGCTCCTCAAAGTTGTTTGATTACCCAAAATGTTAATTTGCATCAGGTCGCACAACGTcagcaaaagcaaaaagaacTTGCTGctcagcagcaacaacatcaaaatTCACCAATCAAACTGTCGAGCACTTCCATCAGTGCATTGGTGAACAATCCGCTTATCCAAACAACTCCGATGAAAGTGGGCCAAACCACAATTAAGCCGATCAATAACAATGGTAATACGGataagaaaaacacaattatTAGCAGTGAAAACTCGGACAATTCCAATTGGGATCCAATACCACCAATGGCTCCACTTAGCTCTGGCTCTTTGGTCCGTTCGAATGTAATTCTTCAACAGCAGATACTTTCGGCAAATGATGATTCTAGTTCGGCCTCTGTTGCGTCGAGTGTCATCAGTTCGTCTCAGATCGAAGGCGATGGATCTTTTGCAAGCTTTGAAGGTTTGCTTATGTCAAAGTCTAGTAAGACAGTCAGCACATTTGTCATTGAAGACGATAGTTCCAAGGATTCGCTAAGTCGTGGTTCAAAAGACAGTGGCCGACAAGTCATAATTGCGAATCAGATGCTTGTGGATTTGTTGGACAAAAAGTCACCAGATCCTCCAACGTCAATGAAACGGAAACATGATGAAGATTTCGAGGAATCAGATGGAAAAAAACTTCTGCTCGAAGTTGAGCCAAAAGTTACAGCTTCGAAGAACGCTGCTAATCTTTATGCCGAGATGGCAGCATCGATTCTCGAAGACGAAGACTTGGATGAAGAACCACCTACAACTATTATTCAACAGCCGAAGTTGTCAGTTCAAACtcaacagcaccagcagcagcagcagcaacagcagcaagaaCTGCAGAAGCAAGTAATTTCGATGCCAGTCAATGTGCAGCGTCAACTCATAATGAATCCGAATAATCCCCATCAAATGATTCTGTCGCAGGGCACGCAACAAACAAATATCCCCACTGCTACGGCGACAATTAAAACCGAACAGGGTCTGCAAACGGTACCAGTTATTCTACAGAAGAACGCTATGGGCCAACAGATTCTCCAACCAGTAATACAACAGCAgccgcagcagcaacagcaaactCAATACGTGTTGGCTACAAATCCCCAAGGACAGACCTATCTCGTTGCTCAGCAGTCACAACCTCAGCAACAGACTCAGCGGTTGCTGGTAACACAAACACCTCAGCAGCAGGTCGCTGGAACGAAGACCATCATAATTCTTCAACAACAAGGGGGTCCCGCACAGAGTGTCGGCCAGCAACAGATGATAACTACAACTACTCAACCGCAAAAGGTTATAATGACCACTTCACAGGGTCAGCAGATGATTGTCACTCAAATGCCGCGGCCCGTGCAGCATCAGATCTACATGAATACTGGTGGTGGTAATGTCATGCAAGCATCACCGATGCAAACTCACATCCAAATGCCGTCTCAACAACAGATGATTCAGAAACAGATCCAATCTCAACCACAGAATCCCAACATACTCTCTCAGCTCTCACATATTCCAGCAACTATTAAAATTCATCAGACTTCAACGCCGATGATAAGCTGTTCAATGTCACAACCTATAACAACAACGGCTACGACTACGTCGCTCCCACGTCTAGGAAAATCTGTTTCCATCGTTCAGCAGCAAGGTATACCACCACCCCAGACACAGGTCACACCAACAGTAATGCAAGCACAAATTGTGCAACACACTGGCGCACCAGGTTCCACCGAGAAGCGACAAGTCATAATATCTGGCGGAAGGACTATAGAGATTGGGGAATCCAATCAACAGGGACAGCAAGTCGTCAGGGTGATGCAATCCCCGCAACATCAGCAACAGAAACAGGCAGTAGCCATTCAAAAGCCAATGGTACGACAGactccaactccaactccaaccCCACCACCAAATCAAGTGACAGTCAAAATTCCTActccacctccacctccacAACCGTTGATTGCGACTACTCCTTCCACAACAACCACAGGAGCAGTTGCAACTCCAACTCAGTCAACAGCAAAAGCTCCAATGAAGGTTAAGCTAGAGGCAAAGACAGAGGTTAAAGTCGaaattaaaacagaaattaaaattgaagCGAAGGTGGAGAAAGTAGAGGAGGATCCACCAGTTGATGTCAACTGGTTGTTTATTTGCGATTGGCGTAATTGCCCTCGCAAGAAATTCAAATCCATCGCAGATTTGCACCATCACAGCTGTCTGGTTCATTGCCCCGAGCATTTGGACGCTGGCGCTGAAATATTCTGCCAGTGGGGCACTGGACCCGGTTTATGCGATGGTATTCCTCGGAAACGATTCTCACTGATGACACACATTCTGGATCGGCATTTGACCATTGAGAGCCTAAAAGCAGCAGTCCAAAAACGTCTTTCAGGTGGTCCACAACCACCATGTACAGGCCAACCAGTCACCATAATAAAGAACGCAGCAGCTGTTGCCGCACAGCAACAGGCTGCAGAATGCACCCGTGGTACTTCTTCGCCAGCTCTATCGACATCATCCAATGGGTCAATGCCATCGACAGGTAGTGCTGCAATGCATGCAATCAAGAGGCACGCTTCGGATTTTGTTAATCCCAAGGAATTGATGGATGAGAATGAAGGTCCCGTGACAAAGAGTATTCGGTTAACAGCTGCTCTAATCTTGAGAAATCTCGTAACCTACACACCAGTAGCTAAAAgGACATTGCGTCAGTATGAACCACACTTGGCGAGTGTTGCTCTAAGTAATGTCGAGTCCAGTGGAACTATATCTcagattttatttgaattgaataattga
Protein Sequence
MSTTELIQSAVPLPAQTDDSVTNNCKAAALRRPLRIEPEQDRETFFRALQSFHESRNTPITRLPKINGQEVDLYVLYSEVINRGGWLKVNIRNEWDELVPSVGFQQRCVNAAVAIKTIYTRYLDKYERLHFLGEDPDKTDDLDDDGRPKKWSSKTYNSIPMTYNYKQHELNEEQRNANRMSEDLYKESEYDKLLLSLISPLPNEQDFAINVCTLMSNESKHTLKLDHCPKLLDALLAHAGVFCHYTMRELFQELYTKVRRHSLQSFWKDLLHDKPQILELSFDDYYQSADEKYSETAVVDLPFRLLQSENFQDGLNADRDDVNMCDLNALDFLALGRGLGTQEYIGQRVHQIASIIRNLSFYDENITVLARNRTFVRFLVMGSNIRWGNLHHMVLDVFGNIATELELQDPTLDDLTRCLMSTVCEGIESSDRGVIISCLEVLYKVCQHDDNEEHIHKCLNQRLYNTLCLYLSLNDIMLLLYTLEAIYALSSLGHRACNSLVQVKGVINSLMSLITVEAQSYGPDGCILMRVVETVPGNMLPMVAQNIANIANLQNAIHTQQPIQQQESTASGQGAQTASPARLSQDSNSQQGTKSPNPSQQEHEQFALSWLSATFEPTSSPDSRVEQQELYRMYLSATQKCGRRGIVSHMQFPRMVRTIFGANCGPTSVKKTEGADSNKIYYVCIRVRANPLPIQMKVQSPQKGLKEGKQKVEPGSVKKTKKRLKLQEQLKQEQQQKQPLPTLANTIGNQQQTATVVNQQQVVAKIEAIPQQHAVVVQPQQPQILQHHVPNTVAKMEGQPVLTSSKLPLSTQVSKIPNTAHPQLIGNVLVTHTPQATLVQQSPTPVKVTTIAEQPQVAQHIIQMPCTSQQQQQITQQIVCNTPSTSSNGGNGGTQPSSSLIKSLLANKVTSSSTATAITTTNTSATTNANVPAAVVIDTNASAAPQSCLITQNVNLHQVAQRQQKQKELAAQQQQHQNSPIKLSSTSISALVNNPLIQTTPMKVGQTTIKPINNNGNTDKKNTIISSENSDNSNWDPIPPMAPLSSGSLVRSNVILQQQILSANDDSSSASVASSVISSSQIEGDGSFASFEGLLMSKSSKTVSTFVIEDDSSKDSLSRGSKDSGRQVIIANQMLVDLLDKKSPDPPTSMKRKHDEDFEESDGKKLLLEVEPKVTASKNAANLYAEMAASILEDEDLDEEPPTTIIQQPKLSVQTQQHQQQQQQQQQELQKQVISMPVNVQRQLIMNPNNPHQMILSQGTQQTNIPTATATIKTEQGLQTVPVILQKNAMGQQILQPVIQQQPQQQQQTQYVLATNPQGQTYLVAQQSQPQQQTQRLLVTQTPQQQVAGTKTIIILQQQGGPAQSVGQQQMITTTTQPQKVIMTTSQGQQMIVTQMPRPVQHQIYMNTGGGNVMQASPMQTHIQMPSQQQMIQKQIQSQPQNPNILSQLSHIPATIKIHQTSTPMISCSMSQPITTTATTTSLPRLGKSVSIVQQQGIPPPQTQVTPTVMQAQIVQHTGAPGSTEKRQVIISGGRTIEIGESNQQGQQVVRVMQSPQHQQQKQAVAIQKPMVRQTPTPTPTPPPNQVTVKIPTPPPPPQPLIATTPSTTTTGAVATPTQSTAKAPMKVKLEAKTEVKVEIKTEIKIEAKVEKVEEDPPVDVNWLFICDWRNCPRKKFKSIADLHHHSCLVHCPEHLDAGAEIFCQWGTGPGLCDGIPRKRFSLMTHILDRHLTIESLKAAVQKRLSGGPQPPCTGQPVTIIKNAAAVAAQQQAAECTRGTSSPALSTSSNGSMPSTGSAAMHAIKRHASDFVNPKELMDENEGPVTKSIRLTAALILRNLVTYTPVAKRTLRQYEPHLASVALSNVESSGTISQILFELNN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00389401;
90% Identity
iTF_01541212;
80% Identity
-