Basic Information

Gene Symbol
Kdm5
Assembly
GCA_905220385.1
Location
LR999957.1:92053708-92059114[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-25 3.5e-22 79.2 0.1 2 88 191 273 190 274 0.94

Sequence Information

Coding Sequence
atgtcgacGAAAGTTAACAAAGCAGCAGGAGAAGTTTCATCAGCAGCTTCGTCAGGATTAGCAATAGGGGGCTCCCCATTGTCCTCTGGTACCAACTCTGGTGGTATAACAAATGGAACACCACAGAGACGCCTGCGAACCAGAACATCCCAATCGGCaagtggaagtgaaaaaaagaacagTGAACGTATGTGTACGTCGACATCAAGTGACTCGAGTTCGTCGCTTCCTGGAAATGGATCGGGCGAAGATGCTAAGAAGAAATCCTTGTTTGCACGTGGTAAGTCCTGCCATACACAGCCGCATTCCTCGTCGACATTTTCACAAAATAAGAACGAAGAGTTCCACTTCGATACGCCACGTGAATGTCCAGTGTTTCGACCGACTACAGAGGAGTTTAAGAATCCACTCGCATATATTAGCAAGATTCGACCGATCGCAGAAAAATGTGGTATTGCAAAAATTCTGCCACCCCCTGAATGGCGTCCGCCCTTCGCTGTGGATGTAGATAAGCTAAAATTCACTCCACGCGTTCAGCGATTGAATGAGCTAGAAGCAAAGACACGAGTAAAGTTGAATTTCCTTGATCAAATCGCAAAATTCTGGGAGTTACAGGGTTCCTCATTGAAAATTCCAATGGTCGAGAGAAAGGCCTTGGATCTGTATACACTGCACAGAGTGGTACAAGAGGAAGGTGGCATGGAACAGACTACGAAGGAGAGAAAATGGGCGAAAGTTGCTAACAGAATGTCGTACCCATCGAGCAAGAGTGTCGGAGCCACCCTGAAGGCGCACTATGAAAGGATTTTACACCCGTTCAACGTGTACACGTCGGGCAAGATTATCGACATGAAGCTAGAAGCAGAAGCAGTCGGAACAGATGACGGCAAGGACTACAAATCCCACGAGATAGTGTCTCGTCAGCAGATTACCCCACCGAATGAGACTACAGCTCGACGATCGAAGCGTTTTGCAAATTCCGGAAAAGGGGCAGTATGTGGCTTGGGAGCAACACCTTCCTCTTCGTCTGCAGAGCATATCGAAACTAAAGAAGACTTCAAACGTAATCTCATTGCCAGTTTCAATGACATAGTAGGGAGTGCAAGTGGCGGCAAGAACACAAATTTAGTTGACCCGCTGATGAAATATATTTGTCATATTTGCAATCGTGGTGATGTAGAGGAATCAATGCTACTCTGTGATGGATGCGATGATAGCTATCATACATTCTGTTTGATTCCACCACTGGCTTCTATTCCGAAGGGTGAGTGGTTGTGTCCCCGATGCGTCGTAGAAGAGGTTAGCAAGCCCACAGAAGCGTTTGGCTTTGAACAAGCTGAGCGAGAATATACGCTTCAGCAATTTGGTGAAATGGCCGACCAATTTAAAGCAGACTATTTCCGCAAGCCGGTACATATGGTACCCACAGAATTAGTGGAGCGGGAATTCTGGCGGATTGTATCGTCAATTGATGAAGATGTGACAGTAGAGTATGGAGCTGACCTACATACTATGGACCATGGTTCGGGATTCCCAACGAAGAGCTCACTCTACCTTCTGCCCAGTGATCAGGAGTATGCCGAGTCACCGTGGAATTTAAATAATCTTCCTTTGCTGGAAGATTCGATTTTGGGATACATCAATGCTGATATAAGTGGAATGAACGCACCCTGGATGTATGTGGGAATGTGTTTCGCAGCTTTTTGCTGGCACAACGAAGATCACTGGAGCTACTCAATCAATTATCTCCATTGGGGAGAACCGAAAACATGGTATGGAGTACCGGGTTCATGTGCAGAGGCTTTCGAAGAGACCATGAAGAAAGCAGCACCCGAATTGTTTGCGTCACAGCCTGATTTGCTCCATCAACTGGTCACCATAATGAATCCGAATATCTTGATGAACAATGGAGTTCCAGTATTCCGCACAGACCAGAATGCAGGCGAATTTGTTATTACTTTTCCACGAGCATATCACGCTGGATTTAATCAAGGATATAACTTCGCTGAGGCGGTAAACTTTGCTCCAGCTGACTGGCTGAAAATGGGTCGCGAGTGTGTAAATCATTATTCTATTCTGCGACGTTTCTGCGTATTTTCACACGACGAGCTTGTTTGTAAGATGGCTTTAGAACCAAACAAACTGACATTTGGTATTGCTACTGCCTGCTACATCGATATGGCAGAAATGGTGGACTCTGAGAAGAAGTTGCGCAAGAGTCTGCTGGAATGGGGAGTTACTCGAGCAGAACGCAAGGCTTTCGAGCTGATTCCGGATGATGAACGTCATTGCCAGGAGTGCAATACCACCTGCTTTCTGTCAGCAGTTTCATGTGAATGCACAAACTCGATCGTATGTCTCAGACACTACACCGTGCTATGTGTTTGTCCTCCTGAGAAACACACTCTGCAATATCGCTATACATTGGACGAAATGCCGTTGATGCTGCAAAAGTTGAAGGCAAAGGCTCAAAGCTTCGAAAGATGGCTGTCACGATGCCGTGACGTCATAGACACAAATACACCCACTGTTGTTACACTGTCCGAGCTGCAAGAACTGACAAAAGAAGCTGAGCTAAAGAAGTTCCCCAGTTCAATGTTGATTGATAGATTGAACGCAGCCGTACTAGAAGCGGAGAAGTGTGTAACTGTTATTCAGCAGTTGGGAATCAATAAGGTTCGCACTCGACTAGACCATTCAACTGACGCCGCTCAGTACAAGCTAACGATGGAAGAACTCGAGTTATTCGCACAAGAAATCGACAACCTGTGCTGTATCATCGAAGAAGGACGTAGTGTTCGTGAGCTTCTCGCAATTGGCAAAGATTTTGTCGAACGTGCCAAGTGTATGCTGGTTAAGACAACAGACGTGATGGACGAGAAATCCATCGAAGGCCTAATAGATGAGGGCTGTTCGCTTCGAATTGAGATGCAGGAAATGACAGGTTTGACTAGCCGTTTAAAAGCCATCAAATGGTGCAAACGCTCACAAATGCTGCGCAATTCAACAGTAAAAATGACATACGCCGAAATCAAGAATCTTATAAGTACCGGCCAAACTCTTAATACCGATCTAGCTGTAGAGAAAGAATTGAGAACATTGCAACAAATTATGTTGCAAATAGATGTTTGGGAGAAGAAAGCGGCTAAATACTTTCGCAGCAGTGCTCAGCACGAACTGCCTGAGATTGAGATGTTTTTAAAGAGTGGTGATGAAATAAATGGTCAACTACAATCGTATGGAGCGCTTAAGGACGCTATTAAGAAGGCCAAAGAGTGGTTGCGGTCTGTGGAAGCACTGCAGGCCAACGTTCACTTTCCATACTGTCACACGCTTGAGGAAATTGTACAACGTGGCAAAAACATTCCCATACAACTAGAAGAACTCGTCCGTATGCAAGGGCATTTGAATAGCGCCAAAGAGTGGAAGGAAAACACGGCAAAGGCATTTCTCAAAAAGAACACGTATTACACACTGTTAGAGGTGCTTATGCCACGGGCAGAGTCGGTTGGTGTCGATTCAGACAGCAAAAGACCGTTTGAGGCTGATTTTCTAAAAGATATGAACCCTGCACAGATTGTGGATTCCTTTAAGACGGCCGAAGAAAAGGAAATTCGAAATATGCGAGAGCTAAGGCGCGCAAACATGGAAAAAAATCCGCTCAAAGATGATTACTGTCTGTGTAATAGCAAGTTCCAGGGTATGATGTTTAATTGTCAACTCTGCAAGGATTGGTTCCACGAAGATTGTGTTAAGGAAGGAACATCAAAATCAAGATCGGCGTCCAGCACTCCCACATTGGCCGGTAGTCCAGCGCCAGCATTAAATGGAATTTTAGTGAAACCGAAATTCCTATGTCCTTCATGTGTGCGATCTAAGAGGCCACGCTTGGAGACGATCCTACCATTATTGGTATCGCTACAGAAGCTGCCAATTCGATTGCCAGAAGACGAGGCACTAAGATGTCTAGCAGAGCGGGCCATGAACTGGCAGGATCGGGCCCAGAAAGCTTTGTCCAACCCCGATATAGCGTCAACACTGGAAGCATTGACGCGAAACAAATCAAAGCCAGATAAACCCAATCGTCGTACGCTCCAACAGCAGAGGAAAAATGCTGTTCTCCCGGAAAAACAGTCTAGCATCTCCGATGGTGAAGATCCGGACAATGATGAAGACgaagatgatgacgacgacgatgagggACGTCTGCGGATCGATGAAGATGCTTTTAGTGATGAAGACTCTTCCCATCAGCAAGAAGACGACAAGATCAAGAATTTCCCCCCCAAACTGACTGATACTGAAAGTGAAGCACTGGAAGAGCTAATGATGGAAGGTGACCTACTCGAAGTTTCCCTGGATGTCTCACAGGAACTCTGGCGGATAATTAAAACCTCCAATCCACATGCCTCAGACCTTAGCCACTACCAACAGACCTTCAATCTCCCCTCAGAAGAATCGAACGACAGTCTAGTCCATCACCACACAAACAACAACTCAAGCAGCAGTAGTGGCAGCAATCACACTTTGAAAAAACGTCGTTCCTTAGATCCCGCGGTGTTGTGTCCCGTGCCGCGCAAGAAAACAGCCACCCCCAACCGACTGCAACAGTCCAATAACAAGAAATCCAGCGGAGGACGGCGATCTGAGCCCGCGAAGCAAACAACCGTAATCTCGACTGAAGACAACACCGAAAACAACACACCGACACAGACACAAAAGGGTGGCAACAATAAAAAACGAAAGCGTGCAACAAGTAAGAAGCTCTCACAACGAGCCCAACTGGCACAACAGGAGGACGATGAAGAAGAATGTCGCGCCGAGAACTGTCATAAGCCAACCGGCCGAGAAGTAGACTGGGTGCAATGTGATGGCGGCTGCAATGAGTGGTTCCACATGTTCTGTGTTGGACTCAATCGCAGCCAAATCAAAGCCGACGACGATTATATTTGCATACGGTGCGCTAAAGCGAATCCTTCGCAGACCACCAAAAACCGAACGCAGGCGAGGTAG
Protein Sequence
MSTKVNKAAGEVSSAASSGLAIGGSPLSSGTNSGGITNGTPQRRLRTRTSQSASGSEKKNSERMCTSTSSDSSSSLPGNGSGEDAKKKSLFARGKSCHTQPHSSSTFSQNKNEEFHFDTPRECPVFRPTTEEFKNPLAYISKIRPIAEKCGIAKILPPPEWRPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRVVQEEGGMEQTTKERKWAKVANRMSYPSSKSVGATLKAHYERILHPFNVYTSGKIIDMKLEAEAVGTDDGKDYKSHEIVSRQQITPPNETTARRSKRFANSGKGAVCGLGATPSSSSAEHIETKEDFKRNLIASFNDIVGSASGGKNTNLVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLIPPLASIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGEMADQFKADYFRKPVHMVPTELVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPSDQEYAESPWNLNNLPLLEDSILGYINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEAFEETMKKAAPELFASQPDLLHQLVTIMNPNILMNNGVPVFRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSILRRFCVFSHDELVCKMALEPNKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTRAERKAFELIPDDERHCQECNTTCFLSAVSCECTNSIVCLRHYTVLCVCPPEKHTLQYRYTLDEMPLMLQKLKAKAQSFERWLSRCRDVIDTNTPTVVTLSELQELTKEAELKKFPSSMLIDRLNAAVLEAEKCVTVIQQLGINKVRTRLDHSTDAAQYKLTMEELELFAQEIDNLCCIIEEGRSVRELLAIGKDFVERAKCMLVKTTDVMDEKSIEGLIDEGCSLRIEMQEMTGLTSRLKAIKWCKRSQMLRNSTVKMTYAEIKNLISTGQTLNTDLAVEKELRTLQQIMLQIDVWEKKAAKYFRSSAQHELPEIEMFLKSGDEINGQLQSYGALKDAIKKAKEWLRSVEALQANVHFPYCHTLEEIVQRGKNIPIQLEELVRMQGHLNSAKEWKENTAKAFLKKNTYYTLLEVLMPRAESVGVDSDSKRPFEADFLKDMNPAQIVDSFKTAEEKEIRNMRELRRANMEKNPLKDDYCLCNSKFQGMMFNCQLCKDWFHEDCVKEGTSKSRSASSTPTLAGSPAPALNGILVKPKFLCPSCVRSKRPRLETILPLLVSLQKLPIRLPEDEALRCLAERAMNWQDRAQKALSNPDIASTLEALTRNKSKPDKPNRRTLQQQRKNAVLPEKQSSISDGEDPDNDEDEDDDDDDEGRLRIDEDAFSDEDSSHQQEDDKIKNFPPKLTDTESEALEELMMEGDLLEVSLDVSQELWRIIKTSNPHASDLSHYQQTFNLPSEESNDSLVHHHTNNNSSSSSGSNHTLKKRRSLDPAVLCPVPRKKTATPNRLQQSNNKKSSGGRRSEPAKQTTVISTEDNTENNTPTQTQKGGNNKKRKRATSKKLSQRAQLAQQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMFCVGLNRSQIKADDDYICIRCAKANPSQTTKNRTQAR*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00665417;
90% Identity
iTF_00314928;
80% Identity
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