Xseg000210.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xylota segnis
Gene Symbol
ZNF541
Assembly
GCA_963583995.1
Location
OY757236.1:4033032-4049341[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 5.9e-05 0.0045 17.4 0.2 2 23 202 223 201 223 0.97
2 5 1.5e-06 0.00012 22.4 1.5 1 23 229 251 229 251 0.99
3 5 9e-05 0.0068 16.8 2.6 1 23 257 281 257 282 0.95
4 5 0.00044 0.033 14.6 0.8 2 23 525 546 524 546 0.97
5 5 0.0036 0.27 11.8 0.7 1 23 1526 1550 1526 1550 0.95

Sequence Information

Coding Sequence
ATGTGTAGTGCCTCTATGGGTGCCGAAGGATCAGTTACATTGCAACTAAGAGAAGCCATTCATTCGTCGGATTCCTCATCAGTCGATGGTTGTTCATCTCTAGACAATGCCCTTACAATTGGTTATCCAGATCCGGATATGTTAGCCGATGTTCTAGGTACTCTACAAACTGCATCACTTAATAATAACACAAACAATAATAACACAATGATTAGTGCCATAACTCTGGAAAGTGTGGATGGTAGTAAAATTAATGATATCGGCTCAACAATAAGCACCACCcccaataacaataataataataatattaacagTGGCCAGAATAagagcaacagcaacagtaaGACCTGCAACAATAACAGCCTTATTAGCTGTAGCAGTAATATATCGCTGAACAGTCCTATTAGTGGACAAATAATCAGCATCACCGGTAGTAGCAGCGGAAGTAGCGGAAGTAGTAGTAATTGTAGTACAACCAGTAATAGCAGttgtagcagtagcagtaatGAGAGTATATCAAACGTATCAGTTCCTGGATCTAATCCACCGATTGTAAAGAAACAAAGACCCAAAACATCATCCCCCACACGACATGGACCGCAACAGTGTCAGGTTTGCAGTAAAGTATTTGGAAATGCATCTGCCTTGGCAAAGCACAAATTAACGCATAGCGATGAGAGGAAGTACGTCTGTGTGATGTGTTCAAAAGCGTTCAAAAGACAGGACCATTTAAATGGCCACATGATGACTCATAGAAATAAGAAACCATACGAATGCAAGGCTGAAGGTTGCGGGAAATCATACTGTGATGCAAGATCGTTGAGACGACATACGGAAAATCATCACAGTGGACTGGCGGCGGCTGCAACCACCCCACAAAACCAATCATCATCACTTTCGCCGTCAACAGGACCGCCAACAGGACTCAGTTTGTCACCGGCAACTGCCAGTGgAGATGCAAGTTCACCCCACGGAGCAAACTGTGTTCAGTACACAACTACGGGAAGCGGCGACGATGGCAGTGGCAGCAATAGCAACAGCTCAGTGAAACAATCATCGGCTGTGAACGTGTCAGTTGTGTCATCATCGACGCAAGCGAGTTCTTCTTCACAATGTTACTCATCTTCAACGCCTTCACCTGCATCATCGCCTTCGTCGAACACCTCAACAAAATCGGTTGTCGCAAATGATGGTCTCACCAGGCAGCAACTGGATCTCATTAGTCAAATTATGCAGCAGACGAAGCAAGGTAACACCCAAGTGACTGTGGCAACAACAACTGCAAATTTGAAGATAGCAGCAAATCAACCACCTTCACCCCATCAGAGCCAGACCCAGAGCCCGCAGCAACAGCTGCAGCGACCAAGGACATGGAATATGCAGaCCCAGCTGCAGCAGACACAGTCAAAAATCTCATCGGTATCGGTGATTGAAAATGCCTCATCGCCGATCACATCAATCTCCATCAATGAACTACTCAACGGAAGTGGAcctcatcagcagcagcaattaACGAGCGCCGGGATAaatcaacaaattttaaatattgttaAAATAGAGCAGAAACCTGTAGAGTGCAATCTATGTCATAGGAAGTTTAAGAATGTCCCAGCTCTCAACGGACACATGCGTCTGCATGGCGGTTACTTCAAAAAAGAGGCGGAAACGAAAAAATGCGACCGTAAAGACGGACTAGGTCCGCCCCTACAAACGGCAAGCATTGGTGTCCGAGCTCTGATCGAAGAGAAAATTATAAGCAAGCGATGTAAAGATTTGAAGGGTGCCTTTGTAGTTCCTGCCCCACCCATAGCGGCTGCGGTTAGACGCGCAGCTAGTGACCTAGAAAACTTTTTAGCCCCCAAGTCACCTATAGTACTTCAAAGAGGAGGCTCCCCGTCCGAAAGGAGTAGCAGTAATAGCCTAGCGGAGACCGGTACTACAGTGCTTCCGTCGGGTCTGCAAATTCAGAAACAATCAACGCCAATCCAACAGAAAACAACCAATGTCAGTGTTGGTACAACGACGGTCTCAACCAATGCATCCAAAGGTACCTCCACCATGGATCACAAGGATGCGACCCTGATAGAACTCTTAAAGCGTGGTACAAAGGTCGCAGTGCGAAAAGCATCCGTTTCTGATTCCAGCCAAATTTTTACCACCAATGGTGGAACTCTGATGTTGCCCTCTGAGTTGTCACTATCATCATCAGGATCGTCTAACCCACCACCACTTGCGATAACCCTACCGAACGGAGAAACCACTCCCGTATCTCTGACGATATCCCAAGCATCGAATGGTTCCGGTGACGTGTACACGCTTACCTATTCAACAGACTCCGCTGCATCGTTCTTTGAAGACAGCGACGTGTACAGTGTGTCAGAGACTGATATGCTCTTACAGACAGTCGATTCGATACAACTTCTCAATGAGTCACCTGAAGCACCGGATCCTATGGAAGAAATCAACTCACTCAGTGAATATCCAAATGAAACTAGCTCCTCCTCCAACTTACGAGAGGTTGTAAGCAGATCCAGTAAAGACATGCAGGCGGTTTTTAGTTCCCCTTTGCAAGAGGCATTGCCCGATTTCCAAACACTTCATTCCAAGGATTTTGTCCTGTACAACAATGGCACATGCAAGGCTTTAAGTAGTGGTGCTCAAGCCACAACTAAATCGCTGGCCACTGTAGTAAAACAGTcactatctcctcttccctcgCCGCTCGCGTATCCCACGCCGCCAGCTAGCCATGAGACAGTCACACAATCGTCGCCATTCCTTGATGACTCCCATCACTTTTCGGATGCAGCGAACTCCTTCTTCCAGGAGAAGTCCACCACTGATTTCATTGATGATGCCGGTGGGACCTTCTTCAAGGACTGTTCCAATGAAGCTCTCACTGAAAGTCAGAAAATCCTCAAGCTAAAGAGTGTTCTGGAAGACAGTGGACAGTTCTTCAAATCGAATGATGACAACTCAACCGATGTGTTCGACACTTCTGTCGTGAAGGTCGAAGACCTTCTGAATGAGTCCAACGATGGGGCGAACTGTGATCTCAAAGACTTTGCCGAACAGAATCTGTCCTTCTTGGATGACGCTCAAGGATTCCTTGATGACTCTCGCAATGCCACTTCTCCCCTCTCCGAGTCATTCTTCACCAGTGGCATTGGAACAGCGGAGGAAGTCAAAGAAGTCCTTCGTGATGTTCTGCCTGATGAATCACTCAATTGTGACccacaaaattcaactgacatTGATCTGTATTATCTGCCTGGACTGGGTCTACAGTCTCAAATGATGCCAAACTCAGAAGATCCTCTTCTTTCCTCCTCgccgagggactttggccatagATTGCATATGCACCTTCACCACCAGCAGTCACAATTGCTGCGAATGGAACAATCAACGGCGACAGCCCTACAAGGACAAGCGATTTCTAAAAAACCTGATCCAGACCCAAGCTTCCCCATGTTAATGGCCACCAGTACGTCCAGAGATGGAAGCACTCAATTCCATTTCACAATGCAGCAGCAGGAGATTAAGCAAGACAACGAAATtgatatcaagccagatatatcCTCGGGTCAAATGTGTATAGACAACAACCTGACAGTGCCACAACCTCCACCGCCGCCCCCACCAACGTTCAAGGATAACTCAACTCAGTTAGAAACGTCACAGTTTTTTGTGACAACTGACATCGCCGCCCAACAAAGCCAGCCGCAAACTGTTCTCACAGCGGCAGCTACTGCCTCCCCGCTGACCAGTTCAATTCTCAAGAGGCGATTGCGCCAAGGATCAATCAGTGGAGACAGTAACTCACACAGCAGTATTCCCCGAAAGTATGAACTCTACAAGTCGAAACTGCGAAAGCCATCAACCACTCACTACACTCCTCAACCGATTCTGAATCCAGAGCGAAAGGGCACCGGTTTGTATTCCAATCTGCCCAAACCACCCACCTTCCATCAAGACGCTCTGCATTTGGACGATGAATTCGAAGAGGCCGCCAGCCTAATGGCCTTCCTCGACGAGTCCAAGGTGAACATCGGCACAGCATATCAGGCTACAATTCCACCTGTCGAGAGAACGGGTGAGTCACACAAAGTGAAAACAATTGCCGGTCTTGTTCAAGCCACAGACCACGAGGAACTAATGTGGGATCCCAGCGTAGCCACAGATGAAAAGATTCTCACACGATACATTGAACTAAGTAAATCCTCAGCCATTCCACTTGGTTACCATTCAGAAGAAGTTGCCCTCAAGGCACTGCTGCAGGTTCAGGGTGATACCCCTATAGCTGTGCTGAATCTCTTAAAATCCCAATCCAATCCGTTCCAGTTGAAATGGTCCTCCTTGGAAGTGGAAATGTTCCTTCGAGGCCTGGAGAAGTATGGCAAAGATTTCTACAGCATTGCTCGAGAGATCATAACCAAGTCAACAAGTGAGTGTATTCAACTGTACTATTTCTGGAAGAAACTCTGTGTGGACTACAAGGCGACTCATTTGAAAATCGAAACTGACGATCCCACTGCATCGCCTTTTTCTGCACATGCTTCGGAGCTTCGCCCCCATGTCTGCGAAATGCCTGATTGCTCAGCTAGCTTCACATCAAAGGCTGCACTTCATGGTCATACCCGAATCCACTGTATCGGACGGAATATGCATCAACTGAACAACAACAATGGCTCGTTAATATTCGGTAACAATGGACAATTGCAACCACATCCGAATCTCAAAGAAGACTATCCCTGCAAGGTGTGCGGCAAGTAA
Protein Sequence
MCSASMGAEGSVTLQLREAIHSSDSSSVDGCSSLDNALTIGYPDPDMLADVLGTLQTASLNNNTNNNNTMISAITLESVDGSKINDIGSTISTTPNNNNNNNINSGQNKSNSNSKTCNNNSLISCSSNISLNSPISGQIISITGSSSGSSGSSSNCSTTSNSSCSSSSNESISNVSVPGSNPPIVKKQRPKTSSPTRHGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCVMCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSGLAAAATTPQNQSSSLSPSTGPPTGLSLSPATASGDASSPHGANCVQYTTTGSGDDGSGSNSNSSVKQSSAVNVSVVSSSTQASSSSQCYSSSTPSPASSPSSNTSTKSVVANDGLTRQQLDLISQIMQQTKQGNTQVTVATTTANLKIAANQPPSPHQSQTQSPQQQLQRPRTWNMQTQLQQTQSKISSVSVIENASSPITSISINELLNGSGPHQQQQLTSAGINQQILNIVKIEQKPVECNLCHRKFKNVPALNGHMRLHGGYFKKEAETKKCDRKDGLGPPLQTASIGVRALIEEKIISKRCKDLKGAFVVPAPPIAAAVRRAASDLENFLAPKSPIVLQRGGSPSERSSSNSLAETGTTVLPSGLQIQKQSTPIQQKTTNVSVGTTTVSTNASKGTSTMDHKDATLIELLKRGTKVAVRKASVSDSSQIFTTNGGTLMLPSELSLSSSGSSNPPPLAITLPNGETTPVSLTISQASNGSGDVYTLTYSTDSAASFFEDSDVYSVSETDMLLQTVDSIQLLNESPEAPDPMEEINSLSEYPNETSSSSNLREVVSRSSKDMQAVFSSPLQEALPDFQTLHSKDFVLYNNGTCKALSSGAQATTKSLATVVKQSLSPLPSPLAYPTPPASHETVTQSSPFLDDSHHFSDAANSFFQEKSTTDFIDDAGGTFFKDCSNEALTESQKILKLKSVLEDSGQFFKSNDDNSTDVFDTSVVKVEDLLNESNDGANCDLKDFAEQNLSFLDDAQGFLDDSRNATSPLSESFFTSGIGTAEEVKEVLRDVLPDESLNCDPQNSTDIDLYYLPGLGLQSQMMPNSEDPLLSSSPRDFGHRLHMHLHHQQSQLLRMEQSTATALQGQAISKKPDPDPSFPMLMATSTSRDGSTQFHFTMQQQEIKQDNEIDIKPDISSGQMCIDNNLTVPQPPPPPPPTFKDNSTQLETSQFFVTTDIAAQQSQPQTVLTAAATASPLTSSILKRRLRQGSISGDSNSHSSIPRKYELYKSKLRKPSTTHYTPQPILNPERKGTGLYSNLPKPPTFHQDALHLDDEFEEAASLMAFLDESKVNIGTAYQATIPPVERTGESHKVKTIAGLVQATDHEELMWDPSVATDEKILTRYIELSKSSAIPLGYHSEEVALKALLQVQGDTPIAVLNLLKSQSNPFQLKWSSLEVEMFLRGLEKYGKDFYSIAREIITKSTSECIQLYYFWKKLCVDYKATHLKIETDDPTASPFSAHASELRPHVCEMPDCSASFTSKAALHGHTRIHCIGRNMHQLNNNNGSLIFGNNGQLQPHPNLKEDYPCKVCGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01522200;
90% Identity
iTF_01542517;
80% Identity
iTF_01541380;