Basic Information

Insect: Xylota segnis
Gene Symbol: -
Assembly: GCA_963583995.1
Location: OY757238.1:14677427-14682504[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 9.2e-07 7e-05 23.1 2.1 1 23 310 332 310 332 0.98

2 9 1.2e-08 9.1e-07 29.0 2.6 1 23 338 360 338 360 0.98

3 9 3.5e-05 0.0027 18.1 0.4 1 23 366 388 366 388 0.98

4 9 4e-06 0.0003 21.1 0.9 1 23 394 416 394 416 0.98

5 9 2.7e-05 0.0021 18.4 1.4 2 23 509 530 508 530 0.96

6 9 2.9e-09 2.2e-07 31.0 1.6 1 23 536 558 536 558 0.98

7 9 0.0017 0.13 12.8 0.7 3 23 566 586 564 586 0.98

8 9 0.00014 0.011 16.2 0.8 1 23 592 614 592 614 0.99

9 9 0.0083 0.63 10.6 0.8 1 23 620 644 620 644 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	9.2e-07	7e-05	23.1	2.1	1	23	310	332	310	332	0.98
2	9	1.2e-08	9.1e-07	29.0	2.6	1	23	338	360	338	360	0.98
3	9	3.5e-05	0.0027	18.1	0.4	1	23	366	388	366	388	0.98
4	9	4e-06	0.0003	21.1	0.9	1	23	394	416	394	416	0.98
5	9	2.7e-05	0.0021	18.4	1.4	2	23	509	530	508	530	0.96
6	9	2.9e-09	2.2e-07	31.0	1.6	1	23	536	558	536	558	0.98
7	9	0.0017	0.13	12.8	0.7	3	23	566	586	564	586	0.98
8	9	0.00014	0.011	16.2	0.8	1	23	592	614	592	614	0.99
9	9	0.0083	0.63	10.6	0.8	1	23	620	644	620	644	0.95

Sequence Information

Coding Sequence: ATGGCGATAAATTTTCCCGCATCATTTGCGGCATGCATAGCGGCTGGTCTCAAAGTGCCACGGCAAATAATGTACTGCATATCTCAAGACACAGGTCAACCGTACGTTCTGTATAAAGATTCTCAAGAGGCGGCCGAACGTAATGCGGCCGCATTAGGTGGAGCGGCAGCACAGTGGGGAACCGAAATGTATCCAGCTATACAGCAGAATACACAAACGCATTTAGCTGCTCAAAATGCTCAAAATTCATCACCACAAATCGCGGCTGCAGCAGCGACTGCAGCAGCTGTAGCcgcacaacagcagcaacaacagcagcagcagcaacagcaaccacACAGTCCGTCGGGCGATGTCGATCAGTCGCGCGACAATGGTGCTAATGTCcgtcaacagcaacagcagggaTCACCGTCGACCAGTCCGTATCCGCAGCGATCGAATGGTGGCGGAGGAGAGGATGACGTGGCCATGAGTCAGGTGGCTGGaatgcagcagcaacagcagcaaaatGCCGCACAACAACAGAACCCAAACCAAAGTACCAACGATCCGCAACCAATATCCGTTGATCCAGCGTCTAACAACCAAGCGCAGCAAGCCAATGACCAAACCTTTAATCCACCGCAGGGTGCCGAACTGGGCTATTATGCGCCCCGACATCCGGGTGGTCCACAAGGTGCAATGTTGGCGCCACCGGGCTTTCCGCCGCTACATTATCTTAATAAACCAGTCCTGCCCGGAATGGCCGGTACAATGGATCAAAACGGTGGCCTTGAAGCGTACACAATGCCTGATCTCCTACCTGGCGGTGGTGCGGGCGGTACCGGCACTGGAACCGGTGCTCACGGTGGAATGCATCAAAATGCCACAGCAACTCCGACGCCgacaacacacaaaacaaaacctcaTAGTGATCTGCGACTCTTCAAGTGTACAACCTGCGGCAAGGacttcaaacaaaaatcaacGCTGTTGCAACATGAACGTATCCATACGGACGCACGGCCGTATCCCTGTACAGAATGCGGCAAACGATTCCGTCAGCAGTCTCACCTCACTCAACACCTGCGCATCCACGCCAACGAGAAGCCATTCTCGTGTGCGTATTGTCCACGCAGTTTCCGGCAACGAGCGATCCTCAATCAGCACATTCGCATCCATTCGGGTGAGAAGCCCTACGCATGCCCAGAGTGCGGCAAGCACTTTCGCCAGAAGGCCATCCTCAATCAACATGTGCGCACCCACCAAGatGTCTCCCCGCATCTCATCTTTAAAAATGGTCCTCATCCAACATTGTGGCCACAAGATGTACCCTTTCCTGGCGATGAGACTGATACAAAGAATGACATTACTGGCTATCAGGACGATGGCTCACAAGGTACACCCGAATCGAGAGCGTGTTTCTCACCCGATGGTAATGGTGGTATGCATTATCCTTCATACTTCAAAGATGGCAAAGGGCAAAAAATGCTGCCCGATGTTATACAACATGGTCGTGCAGTTGGTATGCCACTTTATGTGAGATGTCCGATCTGTGACAAGGAATTCAAACAGAAGACAACACTCCTGCAACACGGTTGTATACACATCGAGTCAAGACCGTATCCGTGCCCTGAGTGCGGTAAGAGATTCCGTCAGCAATCACATTTAACGCAACATTTGCGGATACACACGAATGAGAAACCATTCGGTTGTTTGTATTGTCCGCGATTCTTCCGGCAGAGGACCATTTTGAATCAGCACATTCGAATCCATACTGGAGAGAAACCATACAAGTGTGCACAATGCGGAAAGGATTTCCGACAAAAGGCGATACTAGATCAGCATACAAGGACACACCAGGGTGATCGACCATTCTGTTGCCCAATGCCCAACTGCCGGCGACGGTTTGCCACCGAGGCGGAAGTGAAAAAACACATCGACAACCACATGAACCCGCATTCATCGAAGTCACGCCGTCAAGTCAATCACATGGCAAATGAAACCAAGAATGCAGCTGCCACAGCTGCTCAATTCCTTACGAATATGGACAACAAAACGAACATAATACCCCGCATGGGTCCAGTGGTAAAACACGAACTCTACTTCCCACAATGCTATGGCTCACCGTTCAATCAATCATTTGGCGCCCAACAACAGGGCCAAGGGCAGCCCGGTCAaccacaacaacagcagccagttcaacagcaacaaaaaccggGTCAACAGCAACAACCGAATTCAGGGCATAATGGCAATGCGGCACCACCAAATGGAGCCACCGGAGCCGGTGGTACAGTCGTCACCGTAGCCAATTCGGTTGCACCCGTGTCGCTAGCTTTACCTCCACCACCGGCAGCGCCACCACCACAGTCTGTGCAATCGGCATCAGTACATTTGCCAGCGCCCCAACCCCAGTCAGCATCTATAGTTCCCGTGCCCTCAGCAGCGATctcagcggcagcggcagcagctGCCGCAACTGCTCACACCGTCACTTTATCTATATCATTACCGCCCTCAGCATTACCTCAAGGCGCTACAACGAATGGTGTCGGTGGTGGGGGTACACATGTCTTAGCACCACCACCCACATCCACTACATCGCTTCTTACACCGCATTCTGTGGCGCCATCTACGACGATATCGCATGCGATTCCCATTCATCCTCACATTCACTCAATATTCGGATCTCTATGA
Protein Sequence: MAINFPASFAACIAAGLKVPRQIMYCISQDTGQPYVLYKDSQEAAERNAAALGGAAAQWGTEMYPAIQQNTQTHLAAQNAQNSSPQIAAAAATAAAVAAQQQQQQQQQQQQPHSPSGDVDQSRDNGANVRQQQQQGSPSTSPYPQRSNGGGGEDDVAMSQVAGMQQQQQQNAAQQQNPNQSTNDPQPISVDPASNNQAQQANDQTFNPPQGAELGYYAPRHPGGPQGAMLAPPGFPPLHYLNKPVLPGMAGTMDQNGGLEAYTMPDLLPGGGAGGTGTGTGAHGGMHQNATATPTPTTHKTKPHSDLRLFKCTTCGKDFKQKSTLLQHERIHTDARPYPCTECGKRFRQQSHLTQHLRIHANEKPFSCAYCPRSFRQRAILNQHIRIHSGEKPYACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPQDVPFPGDETDTKNDITGYQDDGSQGTPESRACFSPDGNGGMHYPSYFKDGKGQKMLPDVIQHGRAVGMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCLYCPRFFRQRTILNQHIRIHTGEKPYKCAQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEAEVKKHIDNHMNPHSSKSRRQVNHMANETKNAAATAAQFLTNMDNKTNIIPRMGPVVKHELYFPQCYGSPFNQSFGAQQQGQGQPGQPQQQQPVQQQQKPGQQQQPNSGHNGNAAPPNGATGAGGTVVTVANSVAPVSLALPPPPAAPPPQSVQSASVHLPAPQPQSASIVPVPSAAISAAAAAAAATAHTVTLSISLPPSALPQGATTNGVGGGGTHVLAPPPTSTTSLLTPHSVAPSTTISHAIPIHPHIHSIFGSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01044903;
90% Identity: iTF_00671093;
80% Identity: -