Basic Information

Gene Symbol
nfxl1
Assembly
GCA_963422695.1
Location
OY730481.1:52430799-52447604[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.27 4.5e+03 -1.3 0.8 4 10 173 179 172 179 0.95
2 13 5e-06 0.082 13.8 18.2 1 19 187 204 187 204 0.99
3 13 0.00067 11 7.0 11.5 1 19 240 257 240 257 0.97
4 13 1.3e-08 0.00022 22.1 12.4 1 19 292 310 292 310 0.99
5 13 1.9e-08 0.00031 21.5 8.1 1 18 345 362 345 363 0.99
6 13 0.053 8.7e+02 0.9 0.9 1 10 372 381 372 381 0.76
7 13 0.0002 3.4 8.6 15.8 3 18 399 414 397 415 0.91
8 13 5.9e-08 0.00097 20.0 13.5 1 18 424 441 418 442 0.85
9 13 2 3.3e+04 -5.9 10.3 8 18 487 497 480 498 0.88
10 13 0.028 4.7e+02 1.8 4.9 3 11 511 519 501 520 0.86
11 13 0.00013 2.2 9.3 9.1 1 12 590 601 590 601 0.97
12 13 0.02 3.3e+02 2.3 14.8 3 19 630 646 629 646 0.94
13 13 1.4e-05 0.24 12.3 11.4 1 16 697 711 697 717 0.92

Sequence Information

Coding Sequence
ATGGAAAAATTCAAGGAAATTCAtgataaaaatgttgaaaaggCTAAAGAATTAATCGAAAAATATGATTCAAGTTCTGAAGAGGAAGAAATTTTAGATGGAAGCGATATCTTAAGCACAGTTTTTCAGGGCTACAGTGGGGACAACACGATGCTTAATAAAACTCAATCAATTTTGGAAGAGTTCCTGCAATCTGGCTATGCAATTTGTTTGATATGTATTGGAAGTATAAAACGGAAACAACaaatttggtCATGTAAAAACTGTGTATGCTTCTTTCATTTGTTATGCATTCAAAGATGGGCAAACGATAGTGTTTCACAGCAAAAAATCCGTTCTGAACAAGAACAAGGTTATTACAATAATAACGGAGAATATGTACCAAAAAAAGTTAAAGCAATTCGATGGTGTTGTCCCAAATGTCGTGATGAATATAATATTGATGAGATACCAAAATCTTATATGTGTTTTTGTGGACAAATTGAAAATCCACCATATAATCCTTGGCTGTTACCGCATTCGTGTGGAGAAACTTGTGATAAATCGTTAATCCCCGATTGTGGACATAAATGTCGTTTACGCTGTCATCCAGgcCCTTGTCCGCAATGTCCGCAGACTACTCAAATTAGTTGCAAATGCGGACGTTCACCACCTAAAGCGATAAGATGTTTCGAAAAGACATGGACATGTGATTTAAAAtgtggTAAAATTTTATCATGTGGAATTCATGTATGTAGTTTATCATGCCACGATAAGTGTCCGCCGTGTTCAAAGAGAAGTAAACAATCTTGTCAGTGCGGAAATCAGATTGCGGAAAAAAATTGCTCTGACAAAATTTGGCAATGTAAAAAGaTATGTAACAAAAAATTAGCCTGCGGTCGTCATAACTGTAAACTTCTATGCCATTCTGGAGACTGTGGAGATTGTCCTCTGGGATTACCCAGAAGTTGTCCATGCGGGAAAAATAAAACTACTGCACCCTGCAGTGAAGTCATAGATACATGCGGTGATACATGTCAAAAAATACTTTCTTGTGGATTACACTATTGTGCTCAACGTTGTCATAAAGGAGAATGTAGTTCGTGCTTCACGATTATACAAAAGAAGTGTCGATGCGGTAATCATACGAAGGAACTTCCATGTTCGAAAACTTTTACATGTGAAACTAAATGCAAACAAATTAAAGACTGTAAGAAACATGTTTGCAATAAAAagTGTTGCGATGGTCAATGTCCACCGTGTGATAAAATATGTGGTAAAACTTTGTTATGTCGAAAACATAAATGTCAATCTGTTTGTCATAATGGTCCATGTTATCCATGTGAGCTTAAATCTCAAGTAAAATGTCGTTGTGGTAATACATCAATAACAGTTCCTTGTGGAAGAGAAAGAAAAACACGACCGCCAAAATGTCTTCAACCATGTCGAATTCCAAACAAATGTCATCACCAAAATCCTCATACATGTCATATGAATGAATGTCCAACGTGTATACAAAAATGTGGTTTAGAAAATGATGTTACGAAATGTGTACATCCATGTGAAGCTAAATGTCATGCTGCTGTTAAAGTTCCAATTACACCGAATCCAAAAACAACAAGTATTTGGGATTGGCAAACGGAAACTtttgaaataaaaaatctgCCTCATCCGCGTTGTGAAGTTCAAGTTTTAGTTACTTGCATTGGAGGACATGAAACTATACATTGGCCATGTTGGAATTCAAAACCATCATCATGTGGTCGAAAGTGTTgcagaaatttaaaatgtggaaATCATACATGTCATCTTGTTTGTCATTCAGTTCCCGATACTAATAATCTAAACGAACAAGAGGATTGTGCTAGTTGTGAGGAAGGATGCAAAATTCCAAGATCAAATGATTGTATTCATCCATGTCGTTTACCATGTCATCTGCCACCATGTCAACCATGTAGcgttattataaaaacaaagtGTCATTGCGGCCTTTCACAAGTCTTTTTTAAATGCTCTGAATATAATAAAGACGGTATGACTGAAATAGAGCTTACAAAAGAAAGAGATAAATTGAAATGCTGTGGAAGCCGTTGtatgaaaaattaTCCTTGTGGTCACCAATGTACATCGATTTGTCATTCTGGTATATGTCCTGAACCagaattatgtaaaaaaaaaataaaaatttattgtaaatgtaaaaatttgaaaactgaaataaactgcCAAAAATATCGTTCCGGAGTAATAAGCTTAGATTGTGATGAGAATTGCTTCATTAAACGTGATACTGAAGAACGGATAAAGCGTAAAGAAGAGGAGGATAAAAGGAGGATTGAAGAAGAACGTAATCGATTAGAAATTGaacaatttcaaaagaaattcgGAAAGAAAAAATATCGCGAACGAAAAACAGTTGAAAAGCTATCTATGATGTGGAACATTGGATATTATACATCACCACTATTGATTACATTCCTTTATCGACGCGGTTACTTTGTAGCTGAATCAATAACATCATTAGCGAAATTTTCAACAGGTATTGGAATACTTGTTGTAATTTCATTATGCATGAGAGGCTTAGGTAGATCACAATCTCAAACTTATGTCAAATTTATTAAAGCATTAGAAACGTCGAAAGCGGcaaaaaataatgaagaaagtaaaaaaaatctaCGACTATTTGATTTCGATTTCAAAGATTGGCCAATTGATTTTgatgttaataaaattgaaggtgatggttcaaaaaaatcaatttcttcgaaaatatcaCGTAATAAACCATTCTGGATATCATCATTGCCATGTGAAATAGCTGCTTACATTGCTATACATACTTTTGGTATTCGAATGATTTATCCAGGATCTGTAAAATTGCTACAGaattattttagTCCTATGCTTATTCAAGGAAGATGTAAAttaattgaagaagaaaaaggtGTTCGTTATAAACTTAAAACTCGAGATTCAAATGAAATCGATACATTATTTGTTGATAATAGAAATAGAAATCATCCAAATGGTAGAACGTTAGTGATATGTACTGAAGGAAATGCTGGATTTTATGAAATTGGTATAATGTCAACACCTTTGGCAGCAAAATATTCAGTTCTTGGTTGGAATCATCCCGGTTTTGCGGGTAGTACTggTAAACCATATCCACAACAAGATCAAAATGCAATTGATGCTATCATGCAATTTGCAATTCATGAGTTAAATTTTACAATAGATAATATTATTCATTTTGGTTGGAGTATTGGTGGTTATGCAAGTTTATGGGCTGGATCACAGTATCCAGAAATTAAGGGCATTattCTTGATGCAACATTTGATGATGTTTTATATTTGGCATTACCTCGTATGCCAGATAGTTTATCAGGAATAGTAAAATTGGCAATTCGAAAATATGTTAATCTAAATCATTCCGAACTAATCAATGAATATAATGGTCCAGTTTTAATGATTCGACGAACTGAAGATGAAGTAATTTGCACCGAagacaacaaaattgaaacaaatagaggaaattttttacttttaaatttccTAAAATATCGTTTTCCTAACATTTTTAAGCCGCCACAAATAAAATATGCCACCGTTTTGTTATCGAAACCGCTAGAAAATGGTCAAAAACATAATTCAGATGAAAATAATGATCAACTTTGTTTGTCGTTACTCACATCTTATGTAGCCGATAATTTGAAATCTTATCCATTATTAATTGGCGCTGATTATTCAGATGAACAACGAAATCAACTTGTTGAATATTTGattcctactgttgttaaaattattgttgcTATTAACTCTGTTATTGTAACTGAAGTTACCATTTTGATTGGTGTAGTTGTTGTTATAATTCCGGTTATTGTTATTCCTATTGTTATTGGGATCGATATCGTTGGTAGTAATAATGGCAGAAAACTTTGTGATGAAAATAAATTGATGCTGCATTTAGCTAAACTTTATATTATCAGTCCCGAAAGGATTCTATTACTATTAACTGGTGATTCGAATAGTGAGATTTGTAATGGCATTCAAAGAacaatgaataaaattaaatttgattttaaattttgcaCACCATTGAGTTCGGATAATTTATATATGAGACTTCTTGAAAgtactaaaatattttataatgatgTTTGTGAGAATAATGATAAATCTAaagaatttattcgaCATCATCAATGCCTCCGAGAATTACGTGAAGAATTCATTGATTGTGAAGGTCCAGCAGATTGGTTTGAAAAAACGAACAAAACTTTATTATGCCAAATATTTATTGATGTCCTTAATTGTGATTATATTAAAACAGCCGAATTATGTGGACTACAATCAGCTTTTACAGTTCGTAGTTTATCACTTGATATCTTTAGACCTATTCTGCCGGTGAAATGTTATATTCCACGATCATTACCAAATATTAAAGATCCAATGCCATTAACAGATGATTCGAAAGCAAGAACATTTAGCATTCGAAATAAGTTTCGCCTAATATTTGttattagtattatttatttaacataG
Protein Sequence
MEKFKEIHDKNVEKAKELIEKYDSSSEEEEILDGSDILSTVFQGYSGDNTMLNKTQSILEEFLQSGYAICLICIGSIKRKQQIWSCKNCVCFFHLLCIQRWANDSVSQQKIRSEQEQGYYNNNGEYVPKKVKAIRWCCPKCRDEYNIDEIPKSYMCFCGQIENPPYNPWLLPHSCGETCDKSLIPDCGHKCRLRCHPGPCPQCPQTTQISCKCGRSPPKAIRCFEKTWTCDLKCGKILSCGIHVCSLSCHDKCPPCSKRSKQSCQCGNQIAEKNCSDKIWQCKKICNKKLACGRHNCKLLCHSGDCGDCPLGLPRSCPCGKNKTTAPCSEVIDTCGDTCQKILSCGLHYCAQRCHKGECSSCFTIIQKKCRCGNHTKELPCSKTFTCETKCKQIKDCKKHVCNKKCCDGQCPPCDKICGKTLLCRKHKCQSVCHNGPCYPCELKSQVKCRCGNTSITVPCGRERKTRPPKCLQPCRIPNKCHHQNPHTCHMNECPTCIQKCGLENDVTKCVHPCEAKCHAAVKVPITPNPKTTSIWDWQTETFEIKNLPHPRCEVQVLVTCIGGHETIHWPCWNSKPSSCGRKCCRNLKCGNHTCHLVCHSVPDTNNLNEQEDCASCEEGCKIPRSNDCIHPCRLPCHLPPCQPCSVIIKTKCHCGLSQVFFKCSEYNKDGMTEIELTKERDKLKCCGSRCMKNYPCGHQCTSICHSGICPEPELCKKKIKIYCKCKNLKTEINCQKYRSGVISLDCDENCFIKRDTEERIKRKEEEDKRRIEEERNRLEIEQFQKKFGKKKYRERKTVEKLSMMWNIGYYTSPLLITFLYRRGYFVAESITSLAKFSTGIGILVVISLCMRGLGRSQSQTYVKFIKALETSKAAKNNEESKKNLRLFDFDFKDWPIDFDVNKIEGDGSKKSISSKISRNKPFWISSLPCEIAAYIAIHTFGIRMIYPGSVKLLQNYFSPMLIQGRCKLIEEEKGVRYKLKTRDSNEIDTLFVDNRNRNHPNGRTLVICTEGNAGFYEIGIMSTPLAAKYSVLGWNHPGFAGSTGKPYPQQDQNAIDAIMQFAIHELNFTIDNIIHFGWSIGGYASLWAGSQYPEIKGIILDATFDDVLYLALPRMPDSLSGIVKLAIRKYVNLNHSELINEYNGPVLMIRRTEDEVICTEDNKIETNRGNFLLLNFLKYRFPNIFKPPQIKYATVLLSKPLENGQKHNSDENNDQLCLSLLTSYVADNLKSYPLLIGADYSDEQRNQLVEYLIPTVVKIIVAINSVIVTEVTILIGVVVVIIPVIVIPIVIGIDIVGSNNGRKLCDENKLMLHLAKLYIISPERILLLLTGDSNSEICNGIQRTMNKIKFDFKFCTPLSSDNLYMRLLESTKIFYNDVCENNDKSKEFIRHHQCLRELREEFIDCEGPADWFEKTNKTLLCQIFIDVLNCDYIKTAELCGLQSAFTVRSLSLDIFRPILPVKCYIPRSLPNIKDPMPLTDDSKARTFSIRNKFRLIFVISIIYLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-