Xate024433.1
Basic Information
- Insect
- Xylophagus ater
- Gene Symbol
- stc
- Assembly
- GCA_963422695.1
- Location
- OY730484.1:371055-374304[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.9 3.1e+04 -4.0 1.6 15 19 315 319 314 319 0.81 2 13 0.014 2.3e+02 2.8 0.6 4 10 348 354 347 354 0.96 3 13 5.9e-06 0.097 13.6 16.2 4 19 362 377 360 377 0.93 4 13 2.5e-05 0.41 11.6 11.3 3 18 415 430 407 431 0.87 5 13 2.5e-08 0.00042 21.1 11.4 1 19 471 489 471 489 0.98 6 13 8.3e-06 0.14 13.1 14.6 4 18 537 551 530 552 0.87 7 13 0.043 7.1e+02 1.2 12.2 1 11 592 602 592 614 0.91 8 13 2.5e-09 4.2e-05 24.3 13.4 1 18 619 636 619 637 0.97 9 13 2 3.3e+04 -4.4 0.9 6 10 666 670 666 671 0.69 10 13 2 3.3e+04 -4.3 14.6 7 18 681 693 674 694 0.77 11 13 2.8e-08 0.00046 21.0 9.8 1 17 730 746 730 752 0.93 12 13 3.2e-07 0.0052 17.6 14.8 1 19 762 781 762 781 0.96 13 13 0.61 1e+04 -2.5 0.1 8 12 797 801 794 801 0.85
Sequence Information
- Coding Sequence
- ATGTCTGGATATAATAATCCACGAAGTCAAGAAAATTATATCAGTGGTGATGAAAGTGCTGGACCATCATCGAATACGACAAACGAAGGTTATGTTGATTTCAACCAGTTTCTTTTGCAACATAATTTAAGCGGAATTCATTTATCTGATTATTATAGTTATCCGAATAATCAGTTGCCTTATATGCCGAACATTGATTATAATGTATTTCAACcacaaaatcaatttcaaaatgataTAGCGGCTACATCAAATTTATTACCAACTGCAGCTGAATTTGTGCCGAGATTAAATTGTACAAATTTGAATGATAATGAAACATTTGTTATGCCAACAACTACATCCGCAACAAACAATGTTGTACATTCAGcacaatattataataatgtTGAAGATTTTAAAGGATCATCAAATGAACAACAACCATCACGGAATCATGGTAATAATACCGGAGCAATTAGTAAGACTTCATTGAATCAACAGAATAATGAATCACGAGAGAATCATGAACCACGAGAGAATCATTCATATGGTAATGGTTATTATAgtaatattagtaataatacAAGAAACGGACGTTATGATAACAATCGTAATAATCGTCGTAAAGATCATTGGCGGAGTAATTATCGAGAAAGAGATTGGAATGAATCTCGTCATTCATATCGAGCACGAAATTTCGATCAGTACGTTGGAGAGGGCGATGGTGAAACGGCTTCGAatcattcaaatgaaaaacaaaacgatGAAGATAATGAGAAATATACGCAACGTGAGAAACTTGTACGTGAAATTGAAACAAGAAAACTTGAGTGTCTTGTTTGTGTAGAACAAATAAAATCTCATCAATCGATTTGGTCCTGTTCAAATTGTTTTCATATATTacatttaaattgtattataaaatgGGCATCAAGTTCGAAAGCAGCAGATGGTTGGCGTTGTCCAGCATGTCAGAATATCACTCTAAAAGTTCCACgtgattattattgtttttgtggaaaaacaaaaaatccacATTATAACCGTAACGATTTGGCACATACTTGTGGTGAAGTTTGTGGACGGAAAGAACTATGTGTGCATCCGTGTACATTACTTTGTCATCCCGGTCCATGTCCACCGTGTCAAGCCAATGTTACTCGAGAATGTGGTTGCGGTAAAATGTCGAAAACTATGCAATGCTGTATTAAAGAAGATCTACAATGTGAAAATAAATGCGGAAAACTATTGAATTGTGAATTACATACTTGTGACAAAGATTGTCATATGGGAAAGTGTCCGAATTGTGATCAGAAAGTCGATCAAAAATGTCATTGTGAGAAATTAGAACGTCAGGTTACTTGTACACGAGAAACACTTGAAAAGAAGCGATTTTCATGTGGTAAAACTTGCAGTAAACCATTACCTTGTGGTAATCATATATGTAAAGATTCTTGTCATTCTGGCGATTGTCGAACATGCAAATTAACACCACAAATGATCACATCTTGTCCATGTGGGAAAATGGAAATATTAGCTGGACAACGAAAATCTTGTTTAGATCCAGTTCCAGTTTGTAGTGGAGTCTGTGGACGAACTTTAAGATGCGGTCTTCCTTCTAATCCACATCATTGCATGAGTAAATGTCATACTGGTAATTGTCCACCATGTAATAAACAAACCGCTGTGAAATGTCGTTGCGGTCATATGGATCAAATGATTAAATGTCGCCAGCTAGCGACTCGTGCGGACGATGCTCGTTGTAAGAAACGTTGCACAAAGAAACGTAATTGTGGAAAACATAAATGTAATCAAGAATGTTGCATCGATATCGATCATATTTGTCCGATGCCATGTAATCATAATTTATCATGTGGTAAACATAAATGTGATCAAACATGCCATCGCGGTAATTGTCAACAATGCTATAGAAGTTCATTTGACGAATTGTATTGTGAGTGTGGAGCGAATGTGATTTATCCACCAGTTCCATGCGGTACAAAGCGACCAGTATGCGATAAACCATGTAGTCGTCGACATCCATGTGGTCATCCGGTCAAACATAATTGTCATTCCGGGCCAAACTGTCCACCATGTATGATGTTTACTACGAAGGCATGCTTCGGTAATCATGAGCAACGTAAAACAATTCCATGTATTCAAGAGAGTTACAGTTGTGGTTTACCATGCAACAAAGATCTACGATGTGGTCGACATAAATGCATCAAACCATGTCATGAAGGGATTTGCCAAACTGAAATAGAAATTTGTAAACAGAATTGTATGAAAACAAGACAAATTTGCGGTCACAAATGTAATGCGCCATGTCATAATGGTGATTGTCCGGAAACTCCATgcaaagaaaatGTGGAAGTCACTTGTGAATGCGGTAATCGAAAACAAATGCGTActtgtcatgatttttcaagtGATTATCGTCGAATTGCAACAGCACAATTGGCTACATCAATGATGGAAATGCAACGCGGTAATATGGTTGAGTTGAGCGATATAATGGGTCCGATAAAAATGACCAATAATAAAACtcttGAATGCAATGAAGAATGTAAAGTACTTGAACGAAATCGTCGTTTAGCAGTTGGTCTACAAACTCGTACTACAGAAGTACCATCAAAAGCATTAACTCGTTATTCGGATTTCATACGTGATTGGTATAAAAAAGATGCGAATTTAGTTAAAATGATACATGAGAAATTAACGGAATTGGTGAAACTATCGAAGGATTCAAAACAACGTTCGCGTAGTCATTCATTTCCGACAATGAATCGTGATAAACGACAATTGGTTCATGAAATGTGCGGAATGTTTGGTGTTGATTCGGTCGCATATGATGCAGAACCAAATCGTAATGTTGTTGCGACCGCATATAAAGATCgggCATGGTTTCCAGCTATGAGTATTATGGAAATTATGCAACGTGAAAGCGGACAAAGAAGAGTTCCAGTACCAAATAATAATGCTTGGGGAATGAAAAGATGA
- Protein Sequence
- MSGYNNPRSQENYISGDESAGPSSNTTNEGYVDFNQFLLQHNLSGIHLSDYYSYPNNQLPYMPNIDYNVFQPQNQFQNDIAATSNLLPTAAEFVPRLNCTNLNDNETFVMPTTTSATNNVVHSAQYYNNVEDFKGSSNEQQPSRNHGNNTGAISKTSLNQQNNESRENHEPRENHSYGNGYYSNISNNTRNGRYDNNRNNRRKDHWRSNYRERDWNESRHSYRARNFDQYVGEGDGETASNHSNEKQNDEDNEKYTQREKLVREIETRKLECLVCVEQIKSHQSIWSCSNCFHILHLNCIIKWASSSKAADGWRCPACQNITLKVPRDYYCFCGKTKNPHYNRNDLAHTCGEVCGRKELCVHPCTLLCHPGPCPPCQANVTRECGCGKMSKTMQCCIKEDLQCENKCGKLLNCELHTCDKDCHMGKCPNCDQKVDQKCHCEKLERQVTCTRETLEKKRFSCGKTCSKPLPCGNHICKDSCHSGDCRTCKLTPQMITSCPCGKMEILAGQRKSCLDPVPVCSGVCGRTLRCGLPSNPHHCMSKCHTGNCPPCNKQTAVKCRCGHMDQMIKCRQLATRADDARCKKRCTKKRNCGKHKCNQECCIDIDHICPMPCNHNLSCGKHKCDQTCHRGNCQQCYRSSFDELYCECGANVIYPPVPCGTKRPVCDKPCSRRHPCGHPVKHNCHSGPNCPPCMMFTTKACFGNHEQRKTIPCIQESYSCGLPCNKDLRCGRHKCIKPCHEGICQTEIEICKQNCMKTRQICGHKCNAPCHNGDCPETPCKENVEVTCECGNRKQMRTCHDFSSDYRRIATAQLATSMMEMQRGNMVELSDIMGPIKMTNNKTLECNEECKVLERNRRLAVGLQTRTTEVPSKALTRYSDFIRDWYKKDANLVKMIHEKLTELVKLSKDSKQRSRSHSFPTMNRDKRQLVHEMCGMFGVDSVAYDAEPNRNVVATAYKDRAWFPAMSIMEIMQRESGQRRVPVPNNNAWGMKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -