Basic Information

Insect: Xylophagus ater
Gene Symbol: ZFX
Assembly: GCA_963422695.1
Location: OY730481.1:3651603-3653798[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00037 0.027 15.8 0.4 1 23 98 120 98 120 0.98

2 11 0.0001 0.0073 17.6 2.5 1 23 126 149 126 149 0.96

3 11 3.9e-05 0.0028 18.8 2.0 1 23 155 177 155 177 0.98

4 11 6.6e-06 0.00048 21.3 0.6 1 23 183 205 183 205 0.98

5 11 1.7e-06 0.00013 23.1 0.5 1 23 211 233 211 233 0.99

6 11 0.00018 0.013 16.7 0.4 1 20 239 258 239 259 0.96

7 11 0.29 21 6.7 6.3 1 23 268 288 268 288 0.97

8 11 1.4e-06 0.0001 23.4 0.4 1 23 294 316 294 316 0.98

9 11 6.1e-05 0.0044 18.2 1.3 1 23 322 344 322 344 0.99

10 11 0.0017 0.12 13.7 1.0 1 23 350 376 350 376 0.91

11 11 0.00043 0.031 15.6 0.9 1 20 382 401 382 403 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00037	0.027	15.8	0.4	1	23	98	120	98	120	0.98
2	11	0.0001	0.0073	17.6	2.5	1	23	126	149	126	149	0.96
3	11	3.9e-05	0.0028	18.8	2.0	1	23	155	177	155	177	0.98
4	11	6.6e-06	0.00048	21.3	0.6	1	23	183	205	183	205	0.98
5	11	1.7e-06	0.00013	23.1	0.5	1	23	211	233	211	233	0.99
6	11	0.00018	0.013	16.7	0.4	1	20	239	258	239	259	0.96
7	11	0.29	21	6.7	6.3	1	23	268	288	268	288	0.97
8	11	1.4e-06	0.0001	23.4	0.4	1	23	294	316	294	316	0.98
9	11	6.1e-05	0.0044	18.2	1.3	1	23	322	344	322	344	0.99
10	11	0.0017	0.12	13.7	1.0	1	23	350	376	350	376	0.91
11	11	0.00043	0.031	15.6	0.9	1	20	382	401	382	403	0.94

Sequence Information

Coding Sequence: ATGAGACAAAAATCGATtcgtaaaagaactacaataacaaaacttgaaaaaaccgatacaacaacaacaaatgatGATAGTGCAATTGGTTTATCGGAAAGAAGTTTTGATGAAACGacgatttcaacaaaatcatcaacaattaaaacaaaacgttcattatcatcatcaacagcaacaatatcatcattagtagCAGATGATAAAATCAATCATGATGAAGAAACTGTTGTCTCGTCGATGATAAATTCAAAGAAACCAAAACGACATTGGAAAAAAGAACGTAAACAATATATTTGTACGATTTGtcagaaacaatttttaggttcCAGTGATTTACGAAAACATTTATTAATTCACAGCGATGAACGTCCATTCGAATGTAAACAATGTACGAAAAAGTTTCGTCAAgcaatttgtttgaaaaatcaTATTGCATCAATTCATGGAACTGATGAGAAATTCATATGTGATCATTGTAAGAAATCATTTCCAATTAAAGAACGTTTGCGACTACATATGAGAATACATTCAGGCGAGAAACCGTATAGTTGTAAAGTTTGTAATAAAACGTTTGCAAGAGGTGGACAAcTTCGACAACATTTGGTTACACACAATGGTGTTAAAAAATATCAATGTGAACAGTGttcatcatcattttcttcGCCGGGAAATCTTCGGTTACACATTAAAACCCATTTAGATGAACGTGAGTACATTTGTCATATTTGTAATCGTGGTTTCTATCGCCCAGATGTTTTACGTAAACATTTGACATGTTTTCATGCAAATATAAAAGCATTTCATtgtaaaatatgtaataaaacattaaaaggACATTTATATCAACATATGAAAGTGCATGATAATATTCGACCGTATATTTGTACAATTTGTGAAGcacaattttcacaaaaatccCAGCTAAATGTTCATTTACGAATGCATTCTGGAGAAAGACCATATCGATGTCGAgtttgcTGGCAAGCTTTTGCCCATTCGAGTGTTCTTAAATTACATATACGTaaacatactggtgaaaaaccatttaaatgtttATTATGTAAAGAAAATGGTGTTGCATTCTCCCAGCTGGCACATTTAAAAACACACATGAGAACAATCCATGGTAAAGATAAACCGTACATGTGTGAAGAGTgtcaacaattttttaaaacaaaatttgaattacaACAACACGAAGAGAAATGTTTagataaaaaatatgatattaaaatgaaaaattctaatGATGAAGAATTGGCGACATTATCACGTTTACGTTTATTGGTTGCtgttatattaaagaaaatttcgacAGAAGAACGTTTAAAGAAATTCGGTTTTGAAAAACGTTTAATTGATAATGTTATAATAAGTGCATTAAAATTAGCTGGTCGTAAATTTTTCGATGATACAAATCTAAGTGAAATTGAACGtttcaaaatgaatataaaagaaTTCTTAATTTGGACAATTCCAGCATCATTTATGgagatttttcaaaaagaacaaaaatctACTGAAGAATTATTAGAAGAAATTGCGACAGCTTATTCAAAAGTTAAAAGTGATGAATAA
Protein Sequence: MRQKSIRKRTTITKLEKTDTTTTNDDSAIGLSERSFDETTISTKSSTIKTKRSLSSSTATISSLVADDKINHDEETVVSSMINSKKPKRHWKKERKQYICTICQKQFLGSSDLRKHLLIHSDERPFECKQCTKKFRQAICLKNHIASIHGTDEKFICDHCKKSFPIKERLRLHMRIHSGEKPYSCKVCNKTFARGGQLRQHLVTHNGVKKYQCEQCSSSFSSPGNLRLHIKTHLDEREYICHICNRGFYRPDVLRKHLTCFHANIKAFHCKICNKTLKGHLYQHMKVHDNIRPYICTICEAQFSQKSQLNVHLRMHSGERPYRCRVCWQAFAHSSVLKLHIRKHTGEKPFKCLLCKENGVAFSQLAHLKTHMRTIHGKDKPYMCEECQQFFKTKFELQQHEEKCLDKKYDIKMKNSNDEELATLSRLRLLVAVILKKISTEERLKKFGFEKRLIDNVIISALKLAGRKFFDDTNLSEIERFKMNIKEFLIWTIPASFMEIFQKEQKSTEELLEEIATAYSKVKSDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -