Basic Information

Insect: Xylophagus ater
Gene Symbol: Acin1
Assembly: GCA_963422695.1
Location: OY730484.1:9197125-9200736[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.021 1.5 10.3 1.6 1 23 690 712 690 712 0.95

2 14 0.00013 0.0091 17.2 0.6 1 23 718 740 718 740 0.98

3 14 0.00046 0.033 15.5 5.3 1 23 746 768 746 768 0.98

4 14 0.00022 0.016 16.5 0.7 1 23 774 796 774 796 0.97

5 14 4.7e-05 0.0034 18.6 0.9 1 23 802 824 802 824 0.98

6 14 5.4e-05 0.0039 18.4 0.8 1 23 830 852 830 852 0.98

7 14 0.00022 0.016 16.5 0.7 1 23 858 880 858 880 0.97

8 14 4.7e-05 0.0034 18.6 0.9 1 23 886 908 886 908 0.98

9 14 0.00056 0.041 15.2 0.1 1 23 914 936 914 936 0.98

10 14 8.1e-06 0.00059 21.0 1.1 1 23 942 964 942 964 0.98

11 14 8.1e-06 0.00059 21.0 1.1 1 23 970 992 970 992 0.98

12 14 0.00028 0.02 16.2 1.1 1 23 998 1020 998 1020 0.98

13 14 8.9e-05 0.0064 17.7 2.0 1 23 1026 1048 1026 1048 0.95

14 14 6.1e-05 0.0044 18.2 1.9 1 23 1054 1076 1054 1076 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.021	1.5	10.3	1.6	1	23	690	712	690	712	0.95
2	14	0.00013	0.0091	17.2	0.6	1	23	718	740	718	740	0.98
3	14	0.00046	0.033	15.5	5.3	1	23	746	768	746	768	0.98
4	14	0.00022	0.016	16.5	0.7	1	23	774	796	774	796	0.97
5	14	4.7e-05	0.0034	18.6	0.9	1	23	802	824	802	824	0.98
6	14	5.4e-05	0.0039	18.4	0.8	1	23	830	852	830	852	0.98
7	14	0.00022	0.016	16.5	0.7	1	23	858	880	858	880	0.97
8	14	4.7e-05	0.0034	18.6	0.9	1	23	886	908	886	908	0.98
9	14	0.00056	0.041	15.2	0.1	1	23	914	936	914	936	0.98
10	14	8.1e-06	0.00059	21.0	1.1	1	23	942	964	942	964	0.98
11	14	8.1e-06	0.00059	21.0	1.1	1	23	970	992	970	992	0.98
12	14	0.00028	0.02	16.2	1.1	1	23	998	1020	998	1020	0.98
13	14	8.9e-05	0.0064	17.7	2.0	1	23	1026	1048	1026	1048	0.95
14	14	6.1e-05	0.0044	18.2	1.9	1	23	1054	1076	1054	1076	0.98

Sequence Information

Coding Sequence: ATGTCTTCGCAGAGTGAATCAATTGGTAAACCAGGTACACCTATCACATTGGAAGGAATTATATGGCAGGAGAGTTTAGATGGTATTTTGGTCGTGAAAGTAATATGGAGAAACAAAACCTATGTAGGAACATTAATTCAATGCTCGAGTCATTTGATACCTATAAGATTCTGTGATTCAGCAACTGAAGAATTAGATTCTAGAACTCTTGAAAATATGTCTTCGCAGAGTGAATCAATTGATAAACCAGGTGCACCTATCACATTGGAAGGAATTATATGGCAGGAGAGTTTAGATGGTATTTTGGTCGTGAAAGTAATATGGAGAAACAAAACCTATGTAGGAACATTAATTCAATGCTCGAGTCATTTGATACCTATAAGATTCTGTGATTCAGCAACTGAGGAATTAGATTCTAGAACTCCAAAAAGACGACGGGAACGTGGTCGAAATACAAATCATACACCAGAATTAAGGAATTGTACGCAAATGCAAACTTCTGAGGATCATACTCCGAGCTTAGTAAAACCAGTGACAGATTTAAATACCCAAATATCAACTAAAGAATATAAGACTACATCACCGCCGTGTGCTCTTTCTCCAGTAGTTCTACTTGAACGTCTAGAACAAGtttgtaacaaaaaatataaaaccgcCAACGGATTGCGATATTATCTTGAAACGCCTAGTTCACAGCAAACAACCAGTTCAGAATCATCACCAAATCCAATATCTCCAATTCGCACCTCTATTCAGAAATCCTCTTCAGTAGTAAACGCAActgttaataataatagtagtgGGGGACTTTTAGCAACTGTGAAAACATTAACACCAACAGTTATTACACAAATTATACCACCGCATTCTCCATTATTAACCCAACAGACACAAGCTGTACAACATTCAATGCCCAGAGGAAGcattattcaagaaaataatcaCATATTACCAGAAAGTCAGTCTTCTTTATTGCAACAATCCGAATCAATAACAAATGAATCAATTGGAACAAGTTTAGAAGTAATGTTTGATGAATCGCCGGTAacatttgaaacattttttaacGACCTGCTGAGTGATTCACCAAcaaatacaataaataataagaacaaTATTAGTAGTAGGGAAGTTTTAGGAACTGTGCGAACATCTACACCGACAATTACTACACCGCAGTCCCTATTAATACCCCAACAGCCACAAGCTGTACAACATCCGATGCCCATAGGAAGCCTAATAGATAATAATCAATCAATGGCTGGTGAATCGCCGGTATCAGTTGAAACACTTTTTAAAATCTTGCTCGATTCACCAACAAATagcacaaataataataataatagtaataattgtAATATTAATGCAGTAAATTCGACATCACAACATTATTCATTTAATGAAAACGACGATGCCaatgataatgataatattGGTGGCAGTATTACTTCCACAACTAACAACATATCCAATTCAATTGAACAAGTTACTAAACGACAAAGATCTGATAGTCGTGAAAGTCGTTCTCATAGAAATCGTAACGATAAAAATAAAGCAAACTCCGAGGATAGTAGCAGTAGggatgaaaatgatgaaatattaaaatatgagaGAAAAAAGGGAAATGAAAAACGTGATAGCAATGAAAAATCCAAGTCACAAGTTAAAACAATATTAACaactaatcaaaaaatatcaagtgTTAATGATGATCAAACCTTATTACAACATTCTCCTCCTAGCAGTGCTGGTACTCCACCACGAAATATATCGAGCAATATCTTGTACATAACAAATCTTTGTCTACCGTTTGTTTCTACTTTGGTACAAATTAAAGATCTTTTGGGTAAAACTGGTAAAATAGTGGAGAAAGGATTTAGTATGGATAGAATTAAATCAGAATGTTATGTTAAATATGAAACAGAAGATCAAGcgattaaaacaaaacataaactcCATGGTGTTCGTTGGCCTACATCAAATTTAAAATGCCTAAATGTCGATTTTGGAACCGAAGAAGCAATGCAAAACGCTTTAAACTGCTGCGAaaagGTTAGAAATAAACCATTTGAATGTGATCTATGTGAATCAAAATTTACAGCGAAATCGTCGCTTAAAACGCATAAATATTTACATACCGGCGAGAAACCTTTCGAATGCGATGTATGTGAATCAAAATTTGCACGGAAATCTAGCTTGGAAAATCATAAACGTGCACACACAGGCGAAAAACCTTTCGAATGCGATATATGCGAAAGAAAATTTACATTGAAATGTAATTTGAAACAGcatagaaaaaaacataaaggtGAGAAACCTTTCGAATGCGATCTATGTGAATCAAAATTTGCACGGAAATCTAGCTTGGAAAATCATAAACGTGCACACACAGGCGAAAAACCTTTCGAATGCGATCTATGCGAAAGAAAATTTGCACAGAAATCGTACTTGGAAATTCATAAAAGTACACACACAGGCGAGAAACCTTTCGAATGCGATGTATGTGAATCAAAATTTGCCCGGAAATCGTACTTGGAAATTCATAAACGTACACACACAAGCGAGAAACCTTTCGAATGCGATCTATGTGAATCAAAATTTGCACGGAAATCTAGCTTGGAAAATCATAAACGTGCACACACAGGCGAAAAACCTTTCGAATGCGATCTATGCGAAAGAAAATTTGCACAGAAATCGTACTTGGAAATTCATAAAAGTACACACACAGGCGAGAAACCTTTCGAATGCGATATATGCGAAGGAAAATTTGCACAGAAATCGGGCTTGGAAATTCATAAACGTGCACACACAGGCGAGAAACCTTTCGAATGCGATCTATGCGAAAGAAAATTTGCACAGAAATCGTACTTGGAAATTCATAAACGTACACACACAGGCGAGAAACCTTTCGAATGCGATCTATGCGAAAGAAAATTTGCACAGAAATCGTACTTGGAAATTCATAAACGTACACACACAGGCGAGAAACCTTTCGAATGCGATCTATGTGAATCAAAATTTGCACGGAAATCTAGCTTGGAAAATCATAAAAGTACACACACAGGCGAGAAACTATTTGAATGTGATATATGCGAAAGAAAATTTGCACAGAAACGTAGCTTGAAACGGCATAAATATTTACATACCGGCGAGAAACCTTTCCAATGCGATatatgtgaaagaaaatttgCACGGAAATGGGACTTCGAAcagcataaaaaaaaacataaaggtGAGAAACTATTCAATTGCGATTCTTGGTTTACAAGAGAATACGACCTCGCAAGAAACAAATAA
Protein Sequence: MSSQSESIGKPGTPITLEGIIWQESLDGILVVKVIWRNKTYVGTLIQCSSHLIPIRFCDSATEELDSRTLENMSSQSESIDKPGAPITLEGIIWQESLDGILVVKVIWRNKTYVGTLIQCSSHLIPIRFCDSATEELDSRTPKRRRERGRNTNHTPELRNCTQMQTSEDHTPSLVKPVTDLNTQISTKEYKTTSPPCALSPVVLLERLEQVCNKKYKTANGLRYYLETPSSQQTTSSESSPNPISPIRTSIQKSSSVVNATVNNNSSGGLLATVKTLTPTVITQIIPPHSPLLTQQTQAVQHSMPRGSIIQENNHILPESQSSLLQQSESITNESIGTSLEVMFDESPVTFETFFNDLLSDSPTNTINNKNNISSREVLGTVRTSTPTITTPQSLLIPQQPQAVQHPMPIGSLIDNNQSMAGESPVSVETLFKILLDSPTNSTNNNNNSNNCNINAVNSTSQHYSFNENDDANDNDNIGGSITSTTNNISNSIEQVTKRQRSDSRESRSHRNRNDKNKANSEDSSSRDENDEILKYERKKGNEKRDSNEKSKSQVKTILTTNQKISSVNDDQTLLQHSPPSSAGTPPRNISSNILYITNLCLPFVSTLVQIKDLLGKTGKIVEKGFSMDRIKSECYVKYETEDQAIKTKHKLHGVRWPTSNLKCLNVDFGTEEAMQNALNCCEKVRNKPFECDLCESKFTAKSSLKTHKYLHTGEKPFECDVCESKFARKSSLENHKRAHTGEKPFECDICERKFTLKCNLKQHRKKHKGEKPFECDLCESKFARKSSLENHKRAHTGEKPFECDLCERKFAQKSYLEIHKSTHTGEKPFECDVCESKFARKSYLEIHKRTHTSEKPFECDLCESKFARKSSLENHKRAHTGEKPFECDLCERKFAQKSYLEIHKSTHTGEKPFECDICEGKFAQKSGLEIHKRAHTGEKPFECDLCERKFAQKSYLEIHKRTHTGEKPFECDLCERKFAQKSYLEIHKRTHTGEKPFECDLCESKFARKSSLENHKSTHTGEKLFECDICERKFAQKRSLKRHKYLHTGEKPFQCDICERKFARKWDFEQHKKKHKGEKLFNCDSWFTREYDLARNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01540985;
90% Identity: iTF_01540985;
80% Identity: -