Xate026255.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xylophagus ater
Gene Symbol
Zbtb41
Assembly
GCA_963422695.1
Location
OY730484.1:36898266-36900638[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.081 5.9 8.4 0.1 1 23 76 98 76 98 0.96
2 22 0.00086 0.062 14.6 4.7 1 23 117 139 117 139 0.97
3 22 0.0034 0.25 12.7 1.9 2 23 190 211 189 211 0.97
4 22 0.0016 0.11 13.8 0.6 1 23 218 240 218 240 0.99
5 22 2.2e-06 0.00016 22.8 2.5 1 23 247 269 247 269 0.98
6 22 0.00025 0.018 16.3 3.9 1 23 273 295 273 295 0.99
7 22 4.4e-05 0.0032 18.7 0.3 1 23 300 324 300 324 0.98
8 22 0.00054 0.039 15.3 3.5 1 23 341 364 341 364 0.96
9 22 1.4e-05 0.001 20.3 0.2 1 23 369 393 369 393 0.97
10 22 6e-05 0.0043 18.3 2.9 1 23 399 421 399 421 0.99
11 22 0.00019 0.014 16.7 0.3 1 23 426 450 426 450 0.98
12 22 5e-05 0.0036 18.5 2.6 1 23 467 489 467 489 0.99
13 22 0.0099 0.72 11.3 0.3 1 19 494 514 494 516 0.97
14 22 3.8e-07 2.8e-05 25.2 1.7 1 23 530 552 530 552 0.99
15 22 1.6e-05 0.0011 20.1 5.0 1 23 558 581 558 581 0.98
16 22 0.0046 0.34 12.3 2.9 1 23 589 611 589 612 0.96
17 22 2.5e-05 0.0018 19.4 1.0 1 23 618 641 618 641 0.97
18 22 2.7e-07 2e-05 25.6 2.8 1 23 646 668 646 669 0.96
19 22 1.1e-05 0.00078 20.6 1.8 1 23 676 698 676 698 0.99
20 22 0.00012 0.0089 17.3 0.1 1 20 704 723 704 726 0.94
21 22 8.3e-05 0.006 17.8 1.9 1 23 732 754 732 754 0.99
22 22 3.2e-07 2.3e-05 25.4 1.5 1 23 760 782 760 782 0.99

Sequence Information

Coding Sequence
atgtcggaaaatatgtttgaaattaaaattgaattaattgatgatataaaaatagaaGAAGAATTCAATGATAAAGAAATTTCAATGTCGGAGATTAGTTTACcagaaatttcaataaaacatgAACCGGAATTAATTATAGAGAATGATTTCGAAACtgagaaaatttgtaaatatttacaaaaatcgGATATAAAACAAGAGGATCGGATAAATTTGATTTGGTATAGTTGTGTAATATGTGAAGAACGTTTTTTAAGTTCCGATGATTTATTATTACATGAACAAAATCATATGAACAACACTGAAGAGCATCCGGTGACAAACTCAGATAATGAATCAACGACTTTTAAATGCGATAAATGTGAGAAATCTTTTCGTACTGAAAATTGTTTAGAATTACATCGTTACAGTCATTCATTTGGGAATTcatataaatgtaaattttgtggCTGCATAACAAAACAATCGAATTATAAATGTGAACGCTGTAATGGTTTACAgcttgaaaaacaaaatatagaaaCACATTTTGTACGAAGATATACTATCAATGAAGAACGTTTACAATGTCGACATTGTAATGAAATCTTTACAGATAAAAATATCCTTCAACAACATATAACTACTCATAGGTACACAAAGAAACAGTTTACATGTGATCTCTGTGATTCTACATATGCTTTAAAAAATTCTCTAATCGAACATTATCGAACACATCCAAATATATCATTTCCTTTCAAATGTTCTACTTGTAGTAAAGTATTTAGAACAAATGATAAACTTCAAAATCATCTAAAGATACATACTATACGATTTAAATGTCCTGTTTGCGATTGTAAATTTACGCAAAGAATTAAAATGATATCACATTATCGAACACATGGTGAATATCCTTTCAAATGTTCTGAACCGGATTGTGATAAAGCATTTAAAGTAATGACTGCATTTCAAGAACATATGCGAATGCATGCCAAAGAGAAAACTACTGCATTTAATATTGATGCCGATGATCGACCTTATAAATGTTCAACTTGTGATTGTACATTTGCAGAAAAAGATAATCTTATATCACATTATTATCGAACACATACTAAATATCCTTTCAAATGTTCTGAATCAGAGTGTAATAAAGCATTTAAAGTATTAAGTGAACTGCAAGCACATATGCTACTGCATACCGATGATCGACCTTATAAATGTTCAACTTGTGATTGTACATTTGCAGAAAAGAATAATCTGATATCACATTATCGAATACATACTGAATATCCTTTTAAATGTTCTGAACCCGGTTGTAATAAAGCATTTAAAGTATTGAGTATACTTCAAAAACATATACGAATGCATGCTATAGAGAAAACTGTTACATTTGATATTGATACCGATAAACAACATTATAAATGTCCTGATTGTGATTGTACATTTACAGAAAAGAATGATATGATATCACATTATCAAACACATACTGAATATCCTTTCAAATGTACTAAGCGAGATTGTGATAAAGAATTTAAAGTAATTGATGGACTTCAAAAACATAATGTacgaatgaagaaaaaacttacATTAGATATTGAACGTCCTTATAAATGTCCACATTGTAATAAAACCTTTCCAATTAATGGTACACTTTTAAGACATATACGAACACATTCTAAAGTTAAACCATTTCAATGTGATATTTGTTTTCATTCATTTACCAGAAAAGAAGGACTAAGAAAACATTATCGAACTCGTCACAATGGTAATAATACACATCCTTATAAATGTCATCTATGTGatacaaattttctaataaatgatGAACttcaaaatcatataaaaatacatcaCACTGAAGTTAAACAATTCAAATGTGATAATTGTGATCTTAAATATATTACAAAGTCTCAACTAGAAGCACATTATCAAAAAGATCATATAGTCTCTAATTATAAATGTGAATATTGTgataaaatatttccagaaaaaagTCAACTCCGTAAACATATGATACGACATCATAATGATGGAGAAAGATCATTTAAATGTGATCTTTGTGATCGTTCATATACTGAAAGAAAAAATCTTATAGTACATTATCGAAAGCATACCGGTGAACGGCTTTTTCCATGTCCTAATTGTGATGAAGAATTTGAATCGGCATATTATCTTAAACGGCATATATGGGTacatactggtgagaaaccatATAAATGTGATCGTTGTGATCAATCATATATTGTAAGACGTAATTTAGAAACACATTATCGAAAACATACCGGTGAACGTCCTTTTCAGTGTCATATATGTGATAAAGGTTTTATTGAAAAAGTTCAACTTCAAAGACATATGAAAATCCATGATACGTCGAATGATAATCATTCCTGA
Protein Sequence
MSENMFEIKIELIDDIKIEEEFNDKEISMSEISLPEISIKHEPELIIENDFETEKICKYLQKSDIKQEDRINLIWYSCVICEERFLSSDDLLLHEQNHMNNTEEHPVTNSDNESTTFKCDKCEKSFRTENCLELHRYSHSFGNSYKCKFCGCITKQSNYKCERCNGLQLEKQNIETHFVRRYTINEERLQCRHCNEIFTDKNILQQHITTHRYTKKQFTCDLCDSTYALKNSLIEHYRTHPNISFPFKCSTCSKVFRTNDKLQNHLKIHTIRFKCPVCDCKFTQRIKMISHYRTHGEYPFKCSEPDCDKAFKVMTAFQEHMRMHAKEKTTAFNIDADDRPYKCSTCDCTFAEKDNLISHYYRTHTKYPFKCSESECNKAFKVLSELQAHMLLHTDDRPYKCSTCDCTFAEKNNLISHYRIHTEYPFKCSEPGCNKAFKVLSILQKHIRMHAIEKTVTFDIDTDKQHYKCPDCDCTFTEKNDMISHYQTHTEYPFKCTKRDCDKEFKVIDGLQKHNVRMKKKLTLDIERPYKCPHCNKTFPINGTLLRHIRTHSKVKPFQCDICFHSFTRKEGLRKHYRTRHNGNNTHPYKCHLCDTNFLINDELQNHIKIHHTEVKQFKCDNCDLKYITKSQLEAHYQKDHIVSNYKCEYCDKIFPEKSQLRKHMIRHHNDGERSFKCDLCDRSYTERKNLIVHYRKHTGERLFPCPNCDEEFESAYYLKRHIWVHTGEKPYKCDRCDQSYIVRRNLETHYRKHTGERPFQCHICDKGFIEKVQLQRHMKIHDTSNDNHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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