Xate024931.1
Basic Information
- Insect
- Xylophagus ater
- Gene Symbol
- ZNF609
- Assembly
- GCA_963422695.1
- Location
- OY730484.1:9793619-9799253[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.00027 0.02 16.2 1.8 1 23 983 1005 983 1005 0.96 2 23 3.9e-06 0.00029 22.0 2.3 1 23 1011 1033 1011 1033 0.98 3 23 2.1e-05 0.0015 19.7 2.7 1 23 1039 1061 1039 1061 0.96 4 23 1.6e-06 0.00012 23.2 4.2 1 23 1067 1089 1067 1089 0.98 5 23 2.3e-05 0.0016 19.6 2.2 1 23 1095 1117 1095 1117 0.96 6 23 3.9e-06 0.00029 22.0 2.3 1 23 1123 1145 1123 1145 0.98 7 23 4.1e-06 0.00029 21.9 2.3 1 23 1151 1173 1151 1173 0.98 8 23 2.1e-05 0.0015 19.7 2.7 1 23 1179 1201 1179 1201 0.96 9 23 1.6e-06 0.00012 23.2 4.2 1 23 1207 1229 1207 1229 0.98 10 23 2.3e-05 0.0016 19.6 2.2 1 23 1235 1257 1235 1257 0.96 11 23 3.9e-06 0.00029 22.0 2.3 1 23 1263 1285 1263 1285 0.98 12 23 4.1e-06 0.00029 21.9 2.3 1 23 1291 1313 1291 1313 0.98 13 23 0.00012 0.0087 17.3 1.6 1 23 1319 1341 1319 1341 0.96 14 23 9.1e-05 0.0066 17.7 0.7 1 23 1347 1369 1347 1369 0.98 15 23 0.004 0.29 12.5 2.9 1 23 1375 1397 1375 1397 0.95 16 23 0.0079 0.58 11.6 2.0 1 23 1403 1425 1403 1425 0.96 17 23 0.00013 0.0093 17.2 5.8 1 23 1431 1453 1431 1453 0.98 18 23 0.00013 0.0098 17.2 2.0 1 23 1459 1481 1459 1481 0.96 19 23 9.1e-05 0.0066 17.7 0.7 1 23 1487 1509 1487 1509 0.98 20 23 0.004 0.29 12.5 2.9 1 23 1515 1537 1515 1537 0.95 21 23 0.027 1.9 9.9 2.2 1 23 1543 1565 1543 1565 0.96 22 23 0.00013 0.0093 17.2 5.8 1 23 1571 1593 1571 1593 0.98 23 23 0.00098 0.071 14.4 1.6 1 20 1599 1618 1599 1620 0.94
Sequence Information
- Coding Sequence
- ATGTCTTCGCAGAGTGAACCAATTGGTAAACCAGGTACACCTATCACATTGGAAGGAATAATATGGCAGGAGAGTTTAGATGGTATTTTGGTCGCGAAAGTAACATGGAGAAATAGAACGTATGTAGGAACATTAATTCAATGCTCGAGTCATTGGACACCTATAAGATTCTGTGATTCAACAACTGAAGAATTAGATTCTAGAACTCCAAAGAGAAGACGGAAACGTTGTCGAAATACGACTCTTACACCAGAATTAATGAATTTTACGGAAACGCAAACTCCTGAGGATCATACTCAGAGCTTAGTAAAACCAGTGGCTGATTTAAATGTCCAAATAACAATTGATAAACCAGGTACACCTATCACATTGGAAGGAATAATATGGCAGGAGAGTTTAGATGGTATTTTGGTCGTGAAAGTAACATGGAGAAATAAACCGTATGTAGGAACATTAATTCAATGCTCGAGTCATTGGACACCTATAAGATTCTGTGATTCAACAACTGAAGAATTAGATTCTAGAACTCCAAAGAGAAGACGGAAACGTTGTCGAAATACGACTCTTACACCAGAATTAATGAATTTTACGGAAACGCAAATTCCTGAGGATCATACTCAGAGCTTAGTAAAACCAGTGGCTGATTTAAATGTCCAAATAACAATTGATAAACCAGGTACACCTATCACATTGGAAGGAATAATATGGCAGGAGAGTTTAGATGGTATTTTGGTCGTGAAAGTAACATGGAGAAATAAACCGTATGTAGGAACATTAATTCAATGCTCGAGTCATTGGACACCTATAAGATTCTGTGATTCAACAACTGAAGAATTAGATTCTAGAACTCCAAAGAGAAGACGGAAACGTTGTCGAAATACGACTCTTACACCAGAATTAATGAATTTTACGGAAACGCAAACTCCTGAGGATCATACTCAGAGCTTAGTAAAACCAGTGGCTGATTTAAATGTCCAAATAACAATTGATAAACCAGGTACACCTATCACATTGGAAGGAATAATATGGCAGGAGAGTTTAGATGGTATTTTGGTCGTGAAAGTAACATGGAGAAATAAACCGTATGTAGGAACATTAATTCAATGCTCGAGTCATTGGACACCTATAAGATTCTGTGATTCAACAACTGAAGAATTAGATTCTAGAACTCCAAAGAGAAGACGGAAACGTTGTCGAAATACGACTCTTACACCAGAATTAATGAATTTTACGGAAACGCAAACTCCTGAGGATCATACTCAGAGCTTAGTAAAACCAGTGGCTGATTTAAATGTCCAAATATCAAATAAAGAATGTAAGACTGAATCACTGCCGTGTGCTAATTCTCCAGTAGTTTTACTTGAACGTCTGGAACAAGATTGTAACAAAAACTATAAAACGGCCAACGGATTGCGATATTATCTTGTAACGCCTAGTTCACAGCAAACAACCTCTTCTGAATCATCATCAAATCCAATATCTCCAATTTGCACCTCCATTCCGAAATCATATTCAATAGCAAACGAAactgttaataataataatagcggGGGACTTTTAGCAACTGTGGAAACGTCTACAGCAACAATTACTACACAAATTACACCACCGCACTCCCCATTTTTAGCCCAACAGACACAAGCTGTGCAACATCCAATGCCCAGAGGAAGCTTAGTACAAGGAAATAATCAAATATTGTTAGAAAACCAGTCTTCTTTATCGCAACAATCCGAATCAATAACAAATGAATCAACTGGAACGAGTTTAGAAGCAATGTTTGATGAATCGTCAATATCACTTGAAGCATTTTCAGAAGCAATGTCTGATGAATCGCCAGTatcaattgaaacattttttaacGATTTGCTTAGTGATTCACCAACAAATAGCATAAATAAGAACAGTAATAATAGTAGTGGGGGGCTTTTAGAAACTGTGGAAACATCCACACCAACAATTACGACACAAATTACACCACCACACTCCCCATTTTTAGCCCAACATACACAAGCTGTGCAACATCCAATGCCCAGAGGAAGCTTAGTACAAGGAAATAATCAAATATTGTCAGAAAGTCAGTCTTCTTTATCGCAACAATCCGAATCAATAACAAATGAATCAATTGAAACACGTTTAAAAGCAATGTATGGTGAATCGCCGGTATCAGTTGAAACACTTTTTAAAATCTTGCAAGATTCACCAACAAATAGCCCaagtaatattaataataatagtaatattaaTGCAGTAAATTCGATATCACAACATTATTCATTTAATGAAAACGACGATGGCAATGAAAATGGTAATAATGCTGGCAGTGGTACATCAATAACCAACAACATATCCAATTCAATTGAACAAGTTACTAACCGACAAAGGTCTGATAGTCGTGAAAGTCGTTCTCAAAGGAATCGTAACGATAAAAATAAAGCAAACACCGAGAACAACAGTAGTGGGAACGAAAATGatgaaatatcaaaatatgagagcaaaaacgaaaatgaaaaatgtgATAACACTAAAAGACCCAAGTCACAAGTTAAAACAACATTAGCACCTAATCAAACAATATCAAGGGTTAAGGATGATCAAACGTTATTACAACATTCTCCTCCTCGTAGTTCTGGTACTCCACCGCGTAACATATCGAGCAATATTTTGCACATAACAAATCTTGTCCTACCATTTGTTTCTACTTTGGTACCAATTAAAGATCTTTTGGCTAAAACTGGTGAAATAGTGAAGAATGGACTTTGTATGGATAGAATTAAATCAGAATGTTATGTTAAATATGAAACAGAAGATCAAGcgattaaaacaaaacataaactcCATGATGTTCGCTGGCCTACATCAAATTCAAAATGCCTAAATGTCGATTTTGGAACCGAAGAAGCAATGGAAATGGCTTTAAAATACTGGGAaaaggttgaaaataaaatattcgaaTGCGATCAATGTGGATTCAAATTTACGGCGAAATCGTCGCTCAAAACGCATCAATATTTACATACCGGCGAGAGATCATTCGAATGCGATATATGCGAAAGAAAATTTACACGGAAATCTCAATTCGAAATTCATAAACGTACACACACAGGCGAGAAACCATTTGAATGCAATCAATGTGGATACAAATTTACAGAGAAATCGTCGCTTAAAAAGCATCAATATTTACATACCGGCGAGAAACCATTCGAATGCGATATATGCGAAAGAAAATTTACACGGAAATCTCACTTGGAAAATCATAAACGTACACACACAGGCGAGAAACCATTTGAATGCGATCAATGTGGATACAAATTTACAGAGAAATCGTCGCTTAAAAAGCATCAATATTTACATACCGGCGAGAGATCATTCGAATGCGATATATGCGAAAGAAAATTTACACGGAAATCTCAATTCGAAATTCATAAACGTACACACACAGGCGAGAAACCTTTCGAATGCGATATATGCAGAAGAAAATTTGCACGGAAATGGCAATTGCAAAGGCATAAAAGAACACACACAGGCGAGAAACCATTTGAATGCAATCAATGTGGATACAAATTTACAGAGAAATCGTCGCTTAAAAAGCATCAATATTTACATACCGGCGAGAAACCATTCGAATGCGATATATGCGAAAGAAAATTTACACGGAAATCTCACTTGGAAAATCATAAACGTACACACACAGGCGAGAAACCATTTGAATGCGATCAATGTGGATACAAATTTACAGAGAAATCGTCGCTTAAAAAGCATCAATATTTACATACCGGCGAGAGATCATTCGAATGCGATATATGCGAAAGAAAATTTACACGGAAATCTCAATTCGAAATTCATAAACGTACACACACAGGCGAGAAACCTTTCGAATGCGATATATGCAGAAGAAAATTTGCACGGAAATGGCAATTGCAAAGGCATAAAAGAACACACACAGGGGAAAAACCATTTGAATGCGATCAATGTGGATTTAAATTTACAGAGAAATCGTCGCTTCAATCGCATCAATATTTACATACCGGCGAGAAACCATTCGAATGCGATATATGCGAAAGAAAATTTGCACTGGAATCGTACTTGAAAGTTCATAAACGTACACACACAGGCGAGAAACCATTTGAATGCGATCAAtgtgaatcaaaattttcacatAAATCTAACTTGGAATATCATAAAAGTGCGCACACCGGCGTGAAACCATTTGAATGCGATCAATGTGAATCAAAATTTACACTGCAAACGTCGCTTAAAAGGCATCAATATTTACATACCGGCGAGAAACCATTCGAATGCGatatatgtaaaagaaaattcacacGGAAGTGTACCTTGGAAAGTCATAAAAGAACACACACAGGCGAGAAACCGTTTGAATGCGATCAATGTGGATTTAAATTTACAGAGAAATCGTCGCTTAAATCGCATCAATATTTACATACCGGCGAGAAACCATTCGAATGCGATATATGCGAAAGAAAATTTGCACTGGAATCGTACTTGAAAGTTCATAAACGTACACACACAGGCGAGAAACCATTTGAATGCGATCAAtgtgaatcaaaattttcacatAAATCTAACTTGGAATATCATAAAAGTGCGCACACCGGCGTGAAACCATTTGAATGCGATCAATGTGAATCGAAATTTACACTGAAAACGTCGCTTAAAACGCATCAATATTTACATACCGGCGAGAAACCATTCGAATGCGATATATGCAAAAGAAAATTCACACGGAAGTGTACCTTGGAAAGTCATAAAAGAACACACACAGGCGAGAAACCGTTTGAATGCGATATATGCGAAAGAAAATTTGCAGAGAAACGTAACTTGAATAGGCATAAATGTTTACCTGCCGACGAGAAACCTTTTGAAGGCGATCAATATGAGTCAAAATTTGCACTCAAATTGTACTTGAAAAGGCATAAAATGAAATGGTACTTGGAAAATCATAAAAGTACACACACACGCTAG
- Protein Sequence
- MSSQSEPIGKPGTPITLEGIIWQESLDGILVAKVTWRNRTYVGTLIQCSSHWTPIRFCDSTTEELDSRTPKRRRKRCRNTTLTPELMNFTETQTPEDHTQSLVKPVADLNVQITIDKPGTPITLEGIIWQESLDGILVVKVTWRNKPYVGTLIQCSSHWTPIRFCDSTTEELDSRTPKRRRKRCRNTTLTPELMNFTETQIPEDHTQSLVKPVADLNVQITIDKPGTPITLEGIIWQESLDGILVVKVTWRNKPYVGTLIQCSSHWTPIRFCDSTTEELDSRTPKRRRKRCRNTTLTPELMNFTETQTPEDHTQSLVKPVADLNVQITIDKPGTPITLEGIIWQESLDGILVVKVTWRNKPYVGTLIQCSSHWTPIRFCDSTTEELDSRTPKRRRKRCRNTTLTPELMNFTETQTPEDHTQSLVKPVADLNVQISNKECKTESLPCANSPVVLLERLEQDCNKNYKTANGLRYYLVTPSSQQTTSSESSSNPISPICTSIPKSYSIANETVNNNNSGGLLATVETSTATITTQITPPHSPFLAQQTQAVQHPMPRGSLVQGNNQILLENQSSLSQQSESITNESTGTSLEAMFDESSISLEAFSEAMSDESPVSIETFFNDLLSDSPTNSINKNSNNSSGGLLETVETSTPTITTQITPPHSPFLAQHTQAVQHPMPRGSLVQGNNQILSESQSSLSQQSESITNESIETRLKAMYGESPVSVETLFKILQDSPTNSPSNINNNSNINAVNSISQHYSFNENDDGNENGNNAGSGTSITNNISNSIEQVTNRQRSDSRESRSQRNRNDKNKANTENNSSGNENDEISKYESKNENEKCDNTKRPKSQVKTTLAPNQTISRVKDDQTLLQHSPPRSSGTPPRNISSNILHITNLVLPFVSTLVPIKDLLAKTGEIVKNGLCMDRIKSECYVKYETEDQAIKTKHKLHDVRWPTSNSKCLNVDFGTEEAMEMALKYWEKVENKIFECDQCGFKFTAKSSLKTHQYLHTGERSFECDICERKFTRKSQFEIHKRTHTGEKPFECNQCGYKFTEKSSLKKHQYLHTGEKPFECDICERKFTRKSHLENHKRTHTGEKPFECDQCGYKFTEKSSLKKHQYLHTGERSFECDICERKFTRKSQFEIHKRTHTGEKPFECDICRRKFARKWQLQRHKRTHTGEKPFECNQCGYKFTEKSSLKKHQYLHTGEKPFECDICERKFTRKSHLENHKRTHTGEKPFECDQCGYKFTEKSSLKKHQYLHTGERSFECDICERKFTRKSQFEIHKRTHTGEKPFECDICRRKFARKWQLQRHKRTHTGEKPFECDQCGFKFTEKSSLQSHQYLHTGEKPFECDICERKFALESYLKVHKRTHTGEKPFECDQCESKFSHKSNLEYHKSAHTGVKPFECDQCESKFTLQTSLKRHQYLHTGEKPFECDICKRKFTRKCTLESHKRTHTGEKPFECDQCGFKFTEKSSLKSHQYLHTGEKPFECDICERKFALESYLKVHKRTHTGEKPFECDQCESKFSHKSNLEYHKSAHTGVKPFECDQCESKFTLKTSLKTHQYLHTGEKPFECDICKRKFTRKCTLESHKRTHTGEKPFECDICERKFAEKRNLNRHKCLPADEKPFEGDQYESKFALKLYLKRHKMKWYLENHKSTHTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -