Basic Information

Gene Symbol
Znf541
Assembly
GCA_963422695.1
Location
OY730479.1:19705993-19725462[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.3 1.5e+04 -3.0 0.0 5 17 1169 1181 1169 1182 0.86
2 2 8.4e-08 0.00014 22.8 0.1 3 45 1227 1269 1225 1270 0.92

Sequence Information

Coding Sequence
ATGGCTGCAGTGAATTCCGTACAAAGTGGCCTTCATTTGCCATTAACTGGACTAGCACCGCCCAGAGTATTAATGTGTAGTGCTTCAATGGGTGCCGAAGGTTCAGTTACACTTCAGTTACGTGAAGCTGTTCAAGCACCTGAATCTGGTAACTCTTTAGATACGGCGCTGACAATTGGATATCCAGATCCTGAAATTTTAGCAGATGTATTGGGAACATTACAAGCTGCAGgattaagtaataataatagtaatactGTGATTACTAACAATAGACTTACGAACAGTAAAAATCACAGTATCAGTTCTGTTGGCAGTAGAGTCAGCAGTGGTATGACAAACAATACTATtcataaaaacaacaattgtaatAATACCAGTAGCAGTAGCTGTACCGAAAATTCAGTATCAGTGCAGAATCCACCGATTATTGTTAAGAAATCTCGGCCTAAAACATCATCACCAACACGGCATGGCCCACAGCAATGTCagGTTTGtagtaaaatttttggaaatgcATCCGCATTAGCAAAGCATAAATTAACACATAGTGATGAAAGGAAATACGTTTGTGCTATGTGTTCAAAAGCATTTAAAAGACAGGATCATTTGAATGGTCATATGTTGACACATCGAAATAAGAAACCATACGAATGTAAGGCTGAAGGCTGTGGAAAATCCTATTGTGATGCAAGATCATTAAGAAGACATACAGAAAATCACCATAGTTCACTTGCCATGACACCAACAACACCAAATCAATCACCATCCACTGGACCACCAACTGGTTTAAGTTTGTCTCCAGCAACCGCAAGtggTGATGCCAGTTCACCTCATGGGGCTACATGCATACAATACATCAATTCTGGAGATACAACAAATTCAAAACCATCATCACCCAGTTCACCTGCTGGGGTTGGTAATGAAGGACTCACTAGACAACAATTGGATCTCATTAGTCAAATTATGCAACAAACCAAACAAACCACTGCTCAAGTAACTGTCTCAACGAATACTAATGGCATAAAGAATCATCAAAGGCCAAGAACATGGAATATGCAGACTCAGCTACAGCAAAATCAGTcaaaattatcgccaaattcTTCAGAACCTGTAAGTACAGTGATTAATACTGCTACAAGAACTTCTGCTGGTAGTTCTCAATCACATCATCAGGGAAATCATACACAAACTCAGCAGTCTCAAACACATTCGCAcgctttaaatattattaaagtcGACCAAAAGCCCGTCGAATGTAATTTATGTCAtagaaaatttaagaatattCCTGCCTTAAATGGTCATATGAGGTTACATGGTGGATACTTTAAAAAAGACACAGAAACTAAAAAATGTGAAAAGAAAGAAGCTCCTGGCCCACCTTTGCAAACAGCCAGTATTGGAGTTCGTGctttaattgaagaaaaaattattagcAGAAGAAGTAAAGATTTAAagGGTGCCTTCGTAGTTCCTGCCCCTCCTTTAGCAGCAGTTCGTcgggaaattgaaaatttcttaagtcCCAAAATTCCTTCCGTAGTTTCATCAAGTAATTCATTGACGGGAACAGTAACTAATATTTTTCAAACAAGCACTCTACAACAGAAGAATCCAAATATAAACAGTTTAACAACTATACATAACGCGCCAGTGGAAACGAAAGATGCAACCCTTATTGAGTTATTAAAACGTggaacaaaagttgcagtgaaAAGAACTTGTTCAGATCCTGGTCACACTTTTAGCAATAATCCAACATCTTCATCAGCATTGCTACCTTCAGATCCATCAATATCAGCGCCAAATACTCCCAATCCAACACCTCCGCTAGCAATCTCATTACCTAATGAAACGACTCCACTTGCATTAACTATATCTCAGGCACCAAATGGCACTGGGGATGTTTATACATTAACCTATTCCACAGATTCTACGGCCACCTTTTTTGGTGACAACGATGTTTATAGTGTATCAGATACTGCTATGCTATTGCAAGCTGTCGATTCAATCCAACTCCTAAACGATTCCACAACAACCGAGCAACTCGATCAGATAGCTTCCTTAAGTGAATATTCTTTAGGCGCTGAAAGTATACGACTTCCAGAtggaaataatataacaaaaaattatacgCCAAACTCTAAGCAACTTCAGGCTGTACTTAATTCTCCACTCCCAGAAAGTCTAGCTGAATTTAGTGCACTTCATTCCAAGGACTACGTCTTATATAATTGCACGAATGACGAATCACCATTAACACAATCGTCGGCATCACCTCTGCCTTCTCCTCTAGCATATCCAACACCACCAGCGAGTCATGAAGCAGTAGCTCAAGCGTCACCTTACCTTGACGATTCTCATCATTTTTCCGATGCCAATTcattttttgacgaaaaaaccAGTACGGCTTTCATTGATGAAAATAATGGACAATTCTTTAAGAATTCTGTCGATTCCGACTTaacagaaaatgaaaaaattctgaaattaaaaaacgaGCTTTTCAACGAGAGCAAAAGTGTTCTTGAAGACACCGaacatttctttaaaactgAAGACAACTCTTCGGATGTTTTTGATTCTGAAGTAAAAGTTGAAGATCTTTTAAATGAAACAAATAGCGAGCAATGTGATCTAAAAGATTTTACACATCAAAATTTATCATTTCTAGATGAAACGCATAATTTTCTGGATGACACTCGAAATGCGTCATCGCCATTATCGGCATCATTTTTCACGAGTGCAATATCAAGTGCCGAGGACGTAAAAGAAGTGTTGAAAGATGTGCTGCCAAATAATAATCTAAACAATGAACCGAACTGTGAAAATGATATCGATTTATATTATCTTCCGGGATTAACACTACAATCTCAAATGATGCCTAATTCTGATGATCCTTTACTTTCGTCGTCACCAAAGGATTTTGTGCAGCGAGTTCAACCACACCAATTACAACAGCAGCAACAGGAATTCGTAATTGttaataaatatgaagataCTTGTTCCTATAGTGTGGTGACTCCAAAGAAACCTCGTTCAAGTGATGATGATCCAACAGAACACACTCAATTAATACAAAGAAATAACTTAACGGAGCAATTTATGAATTCGAATCTTATTAATAATAGTGTAGCAAGCAACATAAGTTCAAAAATAAGTCCAAATCAAATGAGCTCGATACTAAAAAAACGACCTACTCCTAAGAAATTGGAACTTTTTCGTTCAAAACTTCGAAAACCAACAACAACTCATTACACACCCCCACCAATGCTTAACCCGGATCGAAAAGCACCAGGACTGTATTCAAGTTTACCAAAAACGCTGATTCAAGAATCAATTGATTTGGCAGATGATTTCGATGATAACACAAATTTAACAGCATTTCTACATGACTCAAAAGTTAATATCGGAACAGCTTATCAAGCAAGTATCTCAAACTCCGCAAAAGATTATGATTATAAAATGACAAATTATGAAGAATTAATGTGGAACCCAACTACAGTTGACGATGATAAATTATTAATACGTTTCATAGAACTTAGCAAATCATCTGCTGTTCCACTTGGATTTCATTCAGAAGAAGTATCTTTAAAAGCTTTACTTCAAGCTCAAGGTGATACTCATGTAGCTTTATTAAATCTCCTCCAATCCCCATCAAGTGCTGTTCACTTAAAATGGATGTCATATGAAATAGAAACATTTCTTAAAGGTcttgaaaaatatggaaaagatttTTATACTATTTCTAAAGAGGTATCTACAAAATCTACCAGTGAATGTATTCAACTTTATTACTTCTGGAAAAAGTTGTGTGTCGACTATAAAACAACGCACTTAAAACAAGGTTCTTTCGATATTGAAGACCATGCAGCGTCACATTCATCACAATCAGAAATTCGTCCTCATGTTTGCGAAATGCCAGATTGTTCAGCCAGCTTTACATCGAAAGCAGCTTTACATGGTCATACACGAATCCATTGCATCGGTAAAAATATGAATCAAGTAGTCAATGGACAAATGTTGCAGGGTACTGGAACTTTATTATCAACAACAGTTCAAAATCAACATATGAAGGATGATTTTCCCTGCAAGGTGTGCGGCAAGTAA
Protein Sequence
MAAVNSVQSGLHLPLTGLAPPRVLMCSASMGAEGSVTLQLREAVQAPESGNSLDTALTIGYPDPEILADVLGTLQAAGLSNNNSNTVITNNRLTNSKNHSISSVGSRVSSGMTNNTIHKNNNCNNTSSSSCTENSVSVQNPPIIVKKSRPKTSSPTRHGPQQCQVCSKIFGNASALAKHKLTHSDERKYVCAMCSKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSSLAMTPTTPNQSPSTGPPTGLSLSPATASGDASSPHGATCIQYINSGDTTNSKPSSPSSPAGVGNEGLTRQQLDLISQIMQQTKQTTAQVTVSTNTNGIKNHQRPRTWNMQTQLQQNQSKLSPNSSEPVSTVINTATRTSAGSSQSHHQGNHTQTQQSQTHSHALNIIKVDQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDTETKKCEKKEAPGPPLQTASIGVRALIEEKIISRRSKDLKGAFVVPAPPLAAVRREIENFLSPKIPSVVSSSNSLTGTVTNIFQTSTLQQKNPNINSLTTIHNAPVETKDATLIELLKRGTKVAVKRTCSDPGHTFSNNPTSSSALLPSDPSISAPNTPNPTPPLAISLPNETTPLALTISQAPNGTGDVYTLTYSTDSTATFFGDNDVYSVSDTAMLLQAVDSIQLLNDSTTTEQLDQIASLSEYSLGAESIRLPDGNNITKNYTPNSKQLQAVLNSPLPESLAEFSALHSKDYVLYNCTNDESPLTQSSASPLPSPLAYPTPPASHEAVAQASPYLDDSHHFSDANSFFDEKTSTAFIDENNGQFFKNSVDSDLTENEKILKLKNELFNESKSVLEDTEHFFKTEDNSSDVFDSEVKVEDLLNETNSEQCDLKDFTHQNLSFLDETHNFLDDTRNASSPLSASFFTSAISSAEDVKEVLKDVLPNNNLNNEPNCENDIDLYYLPGLTLQSQMMPNSDDPLLSSSPKDFVQRVQPHQLQQQQQEFVIVNKYEDTCSYSVVTPKKPRSSDDDPTEHTQLIQRNNLTEQFMNSNLINNSVASNISSKISPNQMSSILKKRPTPKKLELFRSKLRKPTTTHYTPPPMLNPDRKAPGLYSSLPKTLIQESIDLADDFDDNTNLTAFLHDSKVNIGTAYQASISNSAKDYDYKMTNYEELMWNPTTVDDDKLLIRFIELSKSSAVPLGFHSEEVSLKALLQAQGDTHVALLNLLQSPSSAVHLKWMSYEIETFLKGLEKYGKDFYTISKEVSTKSTSECIQLYYFWKKLCVDYKTTHLKQGSFDIEDHAASHSSQSEIRPHVCEMPDCSASFTSKAALHGHTRIHCIGKNMNQVVNGQMLQGTGTLLSTTVQNQHMKDDFPCKVCGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01540998;
90% Identity
iTF_01540998;
80% Identity
iTF_01540998;