Xate024258.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xylophagus ater
Gene Symbol
Mblk-1
Assembly
GCA_963422695.1
Location
OY730483.1:49647039-49667379[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-15 3.3e-12 46.8 0.0 1 45 347 392 347 392 0.95
2 2 7.7e-18 2e-14 53.9 0.0 1 43 786 829 786 831 0.95

Sequence Information

Coding Sequence
ATGGGGTCGACAAGTCCAAGAGTCTTATTTTGTTATTGCATTATATGCCTAGAACGTGTTGCTGAAGAGTTAATGGGACGCAGGAAATGGAAGCTTTATCAAGAAGTTCTTGCACgttcccaattaaatctgaaCACCGGAAACCTAATTCAAAACGATACAATagatCAAAACAGGCTCGATtttttacaacaacaacaagagaAAGACAAAATTGGTTTACATTCGCAAGCCTTATTAGAAAATCATTCGAAAGAAAACGAAGTTGTAACAATAAAAAGCGAGATAAACGAAAATCCGGACATAAAAGGTTGTCTTATAACCGAGAAAGGAAATATAGGAAACACATATTCAGAGGATATTACAGGTAATTCAGGAATAAATAATAGCATCACAAAAATCGATAAAGAATCGATTTATAATCAAACATCATCACCATCATATCCGATTGATTGGAAGCCAACAGAAAAGTGTAACTTTTGTGTTGACGGTAAACTCCTCACAGTGAACGACAGAGGGGAATTGGTGGCAGAGTCTGGCCCGGCTTTGTCCGAGGCAGAACTCGCCAATAGAacaTCACTCGATTCGGAAAGCGATACAAGTGATAGTTCTCCTGAAATTGAAGTACAAAGTCAAACTTCTAGTAATGTTAATAAAACGACAACATCACTATTACAAGATTCTTTTCCACCGAATATGCCATCACTTGAATCAATGGCTGCCCAATTGGCAGCAGTTGTTTCAATGCAAGGATTACAACCAAATTTAGCAACATTATATCCAGGTCTTTGGTATCATCAATTAGCTCAACATGTACCATCAGCTACAACAACTACCTCAGAGGCACAAATTATTGCCGATATTAGTCCCACAACAAAACAATCCTCCAGTCCAAATGATGTTACTGGTGGTGAACAACCATTGGATTTAAGTGCAAAACCATCATCAAATTCTTCTTCGTTAAATGTTGGTAGCGATCAAAAGCCCGTATTTAGAGCTAAACCACGAACAACAAATGTTTCGGGTCGTCGTACATATACTGAAGATAAATTATTATGTGCACTTAAAGATATTATTAGTGGGAAATTGGGTACACGACGTGCAGCCGTTATATATGGTATTCCAAGATCAACTTTACGCAATAAAGTCTATAAAATTGCTATGGAACAAAAACGTGAAGCATCAGCATTACATCAGCCTGCACTTGATGATGAATTAGCTGATGCTGATGATGAAGATAAAGAATTATCTGGTGACGATGAAAAAGATGATAAAATTGTCGGACATCATAATGATGATTTACAACGTTATACAGCAACACATTTAGCTACTGCTACTTTACAAAATACCAATCAATTGGATATTAAGCCAACAATTGATagacaaacacaaaaaatttcatctaCTAATAATACACCACAACCTCAAACACCACCAATAACACCGAATCCATGGCTTGATCCGAATGCAATGTTACAAAGACTATTATTAACTGGCGGTTTAGGTCCTGTACCGGGTATTTTACCACAGAAAGCATCTGATGATCAAAATGCTATtcaagaatttattaaaaatttaatgttacAACATCAGGAATTGATTAAGGAACAGATGAAAAATAGTATGAGTGGTGGTGGTGGTAGTGATATGAACAATGGCAAACCTAATATGTCAGATCCAAGATTTCTAATGCAGAATTTACCATtgttacaacaacaacagcagcagcaacagcagcaacaacaacaacaacaccaccaTCATACACAACATTCCTATTCGAATCGGTTACGAAAATGTGAAAGTCCAGAAACTGCATCATCAATTGATATGAATGAGGTTAGTGATGATCCATCAGTTATCCTGAAAATTCCGTCCTATAAACCGGTAGCTGGATCCTCATCGACATCAGGTAAAAATGGTGAACATATGAATTCACCGCAACCGACACCTCCAATATTGGATCGAAGTCCTCATCAATCTAATAATATACCAGGTATATCGCCACCATTAATACGACAAAGTAGTGAATCACAATCGCCTCCAATAGTTCCTGGAAAAGGTATACTATCGTTAAGAGATGTGATTGCAAATAGCATTAGTCGAACATTCAGTCAGCAAGCTGGTAAAGAGATGAACACTATGAAAACATCTCAAGGATCAGATCAGTCTTTAGAGCATTGCAAACGACCGAGTATATCAGTGATAAAAAGTCTTGGAAGTATATTTCCTACAACTCCCAATTCTTTAAATCTGAGTTCGAGTAGCAGTTCATCACAAAGCTTAGCGAATGCTGCAATGGGTGGTATCGGTGGTAAAGGTACAAGACCAAAACGTGGAAAATATCGTAATTATGATCGTGATAGTTTAGTTGAAGCCGTTAAAGCTGTACAACGTGGTGAAATGTCTGTTCATCGAGCTGGAAGCTTTTATGGAGTACCTCATTCTACATTAGAGTATAAGGTGAAAGAAAGGCATTTAATGAGACCAAGAAAACGTGAACCAAAACCACCATTAGAAGAACGATCTGGTAATACAGGTAGTGGCAGTAATACAACAAATTCCAAAAATACAAACATTCCAGGTTTATCGGCTGTTAGTAGTTTAGATAAAATGAAATCCCAAACAACATCAATTGGGCAAAAGTCATCGATGAAAAATAATCAACAATTTCCGAGTAGTACATCACCGAATGGCATGAAAATGCCAATTTTTGATCCAGCAATGGCTGCTCAATTACAATATGCGCCGTCTTTCATGTGGCAACATTCCGCTGGTTTCGGTACATTGCCAATTGATTTTGCACGTGCTTCAGGTACAGGATCATCGGCAAGCACACCAACATTTCCAACGAATGCTGAACATTTTCTAGCAACACAAATGATGCAAAGAATTCATGAGGATGTAACATCACGTAGCGGTGCCGGAAATGTTTGTAATATAAATAGTGGTAAtagtaacaacaacaacaacaacaatggtAGTGCCAACAGCGGTaatagcaataataataataatttaaatacaatacaTTCGAACAGtgcaacaaataataataataataacaataataataataagccAATAACAAATAATACTATAAATCAGCAAACAACATCTACAAAAACAACACGTGAATTAGCTGAAAATCTTTATGATACAGGCGGTGCAGCAAATGGTTCATTTCTTGATGATATAATACGACAAACATTAGATCGTAAACCAAATGATATACCACATGGTGCATTACTTGATCAACTAGTTAAAAATACCCGAACATCTAGTAGTGCCGGTAGTCCAAGTGGTAGTAGTAGTAATAATGAACCACAAGGGGTAACATTACAATCTATTGGTAGCAAATTAAAACGATCCGGTTCAAGTCCATTACAATTTTCTGTAACGGATATTAAAAGAGAAAGACTGAGTCCAtcaagaacaacaacaacaacaacgccACCACTACCAACTGGATCCAGTGATGCATATCGAAATTCTATAGAATGTGACATATCAAAAGAATCTGTTGAGAATTTACTTAAAACACGAGAAGGTCTTACAATGAAAATGgatgaaaaacaacaacaagaacaacTTCATCATCAATATTTAACTGGATTACATCAACATCATTATCAACAGCAACATCAAcatcagcaacaacaacagcaacaacatcaTTTACATCCGACCAGTAATGTTCGGCATTTATCTGTTGAAGATTTGAATGGAAGTAGTGGAAACCTTCATCATGATAAGTTAGCATTAATTAAATCAGAAACTGAAGACAGTTTATAG
Protein Sequence
MGSTSPRVLFCYCIICLERVAEELMGRRKWKLYQEVLARSQLNLNTGNLIQNDTIDQNRLDFLQQQQEKDKIGLHSQALLENHSKENEVVTIKSEINENPDIKGCLITEKGNIGNTYSEDITGNSGINNSITKIDKESIYNQTSSPSYPIDWKPTEKCNFCVDGKLLTVNDRGELVAESGPALSEAELANRTSLDSESDTSDSSPEIEVQSQTSSNVNKTTTSLLQDSFPPNMPSLESMAAQLAAVVSMQGLQPNLATLYPGLWYHQLAQHVPSATTTTSEAQIIADISPTTKQSSSPNDVTGGEQPLDLSAKPSSNSSSLNVGSDQKPVFRAKPRTTNVSGRRTYTEDKLLCALKDIISGKLGTRRAAVIYGIPRSTLRNKVYKIAMEQKREASALHQPALDDELADADDEDKELSGDDEKDDKIVGHHNDDLQRYTATHLATATLQNTNQLDIKPTIDRQTQKISSTNNTPQPQTPPITPNPWLDPNAMLQRLLLTGGLGPVPGILPQKASDDQNAIQEFIKNLMLQHQELIKEQMKNSMSGGGGSDMNNGKPNMSDPRFLMQNLPLLQQQQQQQQQQQQQQHHHHTQHSYSNRLRKCESPETASSIDMNEVSDDPSVILKIPSYKPVAGSSSTSGKNGEHMNSPQPTPPILDRSPHQSNNIPGISPPLIRQSSESQSPPIVPGKGILSLRDVIANSISRTFSQQAGKEMNTMKTSQGSDQSLEHCKRPSISVIKSLGSIFPTTPNSLNLSSSSSSSQSLANAAMGGIGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKREPKPPLEERSGNTGSGSNTTNSKNTNIPGLSAVSSLDKMKSQTTSIGQKSSMKNNQQFPSSTSPNGMKMPIFDPAMAAQLQYAPSFMWQHSAGFGTLPIDFARASGTGSSASTPTFPTNAEHFLATQMMQRIHEDVTSRSGAGNVCNINSGNSNNNNNNNGSANSGNSNNNNNLNTIHSNSATNNNNNNNNNNKPITNNTINQQTTSTKTTRELAENLYDTGGAANGSFLDDIIRQTLDRKPNDIPHGALLDQLVKNTRTSSSAGSPSGSSSNNEPQGVTLQSIGSKLKRSGSSPLQFSVTDIKRERLSPSRTTTTTTPPLPTGSSDAYRNSIECDISKESVENLLKTREGLTMKMDEKQQQEQLHHQYLTGLHQHHYQQQHQHQQQQQQQHHLHPTSNVRHLSVEDLNGSSGNLHHDKLALIKSETEDSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-