Xate004851.1
Basic Information
- Insect
- Xylophagus ater
- Gene Symbol
- kn
- Assembly
- GCA_963422695.1
- Location
- OY730478.1:58836478-58843562[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-119 2.5e-115 386.9 0.0 205 385 1 209 1 213 0.99 2 2 3.3e-11 5.4e-07 29.2 12.7 422 511 212 303 208 317 0.81
Sequence Information
- Coding Sequence
- ATGAGACGATTCCagGTTGTGATAGCAACACAAGTAACCGTTGAAGGACCACTTCTTGCCATTTCCGATAATATGTTCGTTCATAATAATTCAAAACATGGCCGTCGAGCAAAACGTTTGGATGCAACGGAAGGTACAGGCAATTCTCCCCTGGCCATTTCGGGTCATCCCCTTGCGCCAGACAGTACCTACGACGGCCTTTATCCTCCGTTACCGGTTGCTACGCCATGCATAAAAGCAATATCACCAAGCGAAGGTTGGACAACTGGAGGTGCTACTGTCATCATTGTCGGTGATAATTTCTTTGATGGCCTTCAAGTTGTATTTGGTACAATGTTGGTTTGGAGTGAATTAATAACATCACATGCGATTCGTGTACAAACACCACCGCGACATATTCCTGGTGTTGTTGAAGTAACATTATCATATAAAAGTAAACAATTTTGTAAAGGATCACCAGGACGATTTGTTTATGTttCTCTCAATGAACCAACAATAGATTATGGATTTCAAagattacaaaaattaattccaCGTCATCCAGGTGATccagaaaaattacaaaaagaaatCATATTAAAACGTGCAGCCGATTTAGTTGAGGCACTTTATTCGATGCCCAGatCTCCAGGTGGATCAACAGGTTTTAATTCATACGCTGGTCAGTTAGCTGTTAGCGTACAAGATGGTTCTGGCCAATGGACAGAAGATGAATATCAAAGGGCACAAAGTAGCAGTGTCAGTCCACGTGGCGGTTATTGTAGTAGCGCATCAACACCACATTCATCGGGTGGTTCGTATGGTGCAACCGCTAATGGTTATGGTCCAGCACCAAATATGGGTACGTTATCATCATCGCCAGGCAGTGTATTCAATTCAACATCAACTAGTGCCTTTTCACCATTAATTACAACGGCAACTCAATGGCATCAAGCATTTGTTCCATATCACCATCACTATCACCAATCCTGGCATAATCCTCAGTCATCTGCAGCCACTGCTGTTTAA
- Protein Sequence
- MRRFQVVIATQVTVEGPLLAISDNMFVHNNSKHGRRAKRLDATEGTGNSPLAISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDEYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATANGYGPAPNMGTLSSSPGSVFNSTSTSAFSPLITTATQWHQAFVPYHHHYHQSWHNPQSSAATAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01116233;
- 90% Identity
- iTF_00642950;
- 80% Identity
- -