Xate004812.1
Basic Information
- Insect
- Xylophagus ater
- Gene Symbol
- Xbp1
- Assembly
- GCA_963422695.1
- Location
- OY730478.1:58567902-58569199[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-14 1.7e-11 44.8 9.0 2 65 52 115 52 115 0.96 2 2 0.03 45 5.0 11.0 26 55 111 140 108 146 0.87
Sequence Information
- Coding Sequence
- atgagtGCTCCTATTTTGATTACTGTACCGAAATATGTGGCGATATCGCCAAGTCCAGTACAAAATTCTGTTTCACCGGCTCCTACATACGATACTGATACAGATAATGATTCACCGAAAGGCAGGAAACGTCGTTTGGATCATTTAACATGGGAGGAGAAAATTCAAAGAAAgAAATTGAAAAATCGTGTTGCAGCACAAACATCACGTGACCGAAAGAAAGCTAAAATGGATGAAATGGAATACACAGTAAAACTTCTTTCACAAAAAACCGATATGTTACAGAATAAATGCGACAGTTTACAATCAATAAATGAatcacttttaaataaaaatcgtaAATTAGATCAACAAGTCGAAGAATTACAAAAACAGCTTGAAGAACTTCAAAAACAACAAACCGAAATgcaaaacaatacaaaatctTCAATAGCAGCACATGAATGTCCTTTGAAAATGGATTGGAATGGAATTCCAGTCGACCCGATCCGTTTACAAAGACAATTCAGCAGCTCTATGGAAGATAATAGCTCTATGCCTGCTTTACAAGACTTGCTCGAAGATTTCGATGCCAGCAAATTGGAAGAACTTGCCGAAAGTCTACTCGCAGATATCCAAGCAGACATGGAAAGAAGCTCTACACCAAGCAGCAATTATGTTACCGAAAATGCAAGCGGTACAAAGCAATTGCCTGGATCAATGGTGGGGACCACAACAGAGCTCATGGAATCCGGCGAAGATAGTTGTATCAGCATAAAAACTGAAAAGAATTCTGAAAGTGATtcaataaatgaaaatgatgtaataaataaaataaccgATGATACAATAGCTGATCCTGAAATGTTATATGGAACTTATGATGAGAAAACAAATTCAATTACAGTCGTTTTACCAGACGGCAATATATCACATGATGAAGCTGTAGAAGAGATTGTCAGTGAAGAAGAGCGATTGGCaatggatgatgatgatgaagaagaatttgatccagtgaaagaatttttaacgccaaaagaagaaattatacAAGCAAAAAGCCCATTTTCAACACATTCAATATCGGATTATGGATATGAATCGATTGGATCACCACAAAGTGATTCCAGTGGTTTACAATTTAATGATCTCTGGGATCATACGTTTACAGAGCTATTTCCCTCTTTAGTTTAG
- Protein Sequence
- MSAPILITVPKYVAISPSPVQNSVSPAPTYDTDTDNDSPKGRKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKKAKMDEMEYTVKLLSQKTDMLQNKCDSLQSINESLLNKNRKLDQQVEELQKQLEELQKQQTEMQNNTKSSIAAHECPLKMDWNGIPVDPIRLQRQFSSSMEDNSSMPALQDLLEDFDASKLEELAESLLADIQADMERSSTPSSNYVTENASGTKQLPGSMVGTTTELMESGEDSCISIKTEKNSESDSINENDVINKITDDTIADPEMLYGTYDEKTNSITVVLPDGNISHDEAVEEIVSEEERLAMDDDDEEEFDPVKEFLTPKEEIIQAKSPFSTHSISDYGYESIGSPQSDSSGLQFNDLWDHTFTELFPSLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -