Basic Information

Insect: Xylocopa violacea
Gene Symbol: stc
Assembly: GCA_963969225.1
Location: CAXAJV010000013.1:24173783-24178182[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 2e+04 -4.4 1.6 15 19 548 552 547 552 0.81

2 15 0.16 1.7e+03 -0.6 0.3 4 10 581 587 580 587 0.94

3 15 2.6e-05 0.26 11.5 14.9 4 19 598 613 596 613 0.93

4 15 1.1e-07 0.0012 19.0 10.7 1 18 649 666 649 667 0.97

5 15 0.36 3.6e+03 -1.7 1.2 8 13 672 677 671 678 0.81

6 15 0.86 8.7e+03 -2.9 0.8 6 10 695 699 694 699 0.89

7 15 3.4e-08 0.00034 20.7 11.2 1 19 705 723 705 723 0.98

8 15 4e-06 0.04 14.1 12.8 4 18 770 784 763 785 0.85

9 15 2 2e+04 -4.7 1.6 5 10 814 819 814 819 0.90

10 15 0.00058 5.9 7.2 8.4 1 11 825 835 825 836 0.97

11 15 1.8e-10 1.8e-06 28.0 14.3 1 19 852 870 852 870 0.98

12 15 0.62 6.3e+03 -2.5 0.7 5 10 898 903 898 903 0.92

13 15 2 2e+04 -6.9 9.4 10 19 917 927 909 927 0.68

14 15 2.3e-07 0.0023 18.1 12.3 1 16 963 978 963 989 0.85

15 15 8e-06 0.081 13.1 13.6 1 19 995 1014 995 1014 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	2e+04	-4.4	1.6	15	19	548	552	547	552	0.81
2	15	0.16	1.7e+03	-0.6	0.3	4	10	581	587	580	587	0.94
3	15	2.6e-05	0.26	11.5	14.9	4	19	598	613	596	613	0.93
4	15	1.1e-07	0.0012	19.0	10.7	1	18	649	666	649	667	0.97
5	15	0.36	3.6e+03	-1.7	1.2	8	13	672	677	671	678	0.81
6	15	0.86	8.7e+03	-2.9	0.8	6	10	695	699	694	699	0.89
7	15	3.4e-08	0.00034	20.7	11.2	1	19	705	723	705	723	0.98
8	15	4e-06	0.04	14.1	12.8	4	18	770	784	763	785	0.85
9	15	2	2e+04	-4.7	1.6	5	10	814	819	814	819	0.90
10	15	0.00058	5.9	7.2	8.4	1	11	825	835	825	836	0.97
11	15	1.8e-10	1.8e-06	28.0	14.3	1	19	852	870	852	870	0.98
12	15	0.62	6.3e+03	-2.5	0.7	5	10	898	903	898	903	0.92
13	15	2	2e+04	-6.9	9.4	10	19	917	927	909	927	0.68
14	15	2.3e-07	0.0023	18.1	12.3	1	16	963	978	963	989	0.85
15	15	8e-06	0.081	13.1	13.6	1	19	995	1014	995	1014	0.97

Sequence Information

Coding Sequence: ATGGCTACTTGGGATGGTTCTTATTCTGGGCCAGACGACCAAAATTATTACGTATACTCCGATCAGAATGCTTCCGAATCAGCAGCGAGAAACTGGACGTTCTTTCCTAGCGATATAAATAATGATTATTTACGATCTAACGGTGAGTTCTATGTACAAAATGAACGCGCATTCGAGCAGAGTAATCCAAACGCATTCTACCATTCGAACGCAAACGTTATACCAAATTTGTTGACCACAACTAACAGTTATTGCGAAAGTGCAACAAACTCGATAGATAATGCTCAAGTATTAAGTAATCAAGGGTATTTTCCAAATATCGTTAAATCTGAACAACAATATTACGTACCTGAAAGTTCTTGGAAACATAATTATGATTTAAAGCAGGAGAAAACTAAACATAACTTTACGAGGATAGTCGGAGAAGATAAAAACAGTGTAGCTAACAAGTCAAATTTACATGTTATGGCTGAAGAATTTGTGCCAAATAATAAAGTATCCGACGATAAGAGAGAGGAATCGCAAGATACAAAAACTATCAATGGCGCGAATTCTTCTATCAAAGACAGTAACGGAGATTCGGATAAATATTTGTTTTCTAACGCGAATAGACACGAAAGGAAGTACAGTAATAAAAGAAATTTAAATTATAAACCGAAAGAAGAACAGCAGGATAGATACTACAAAAGAAATGGGTATAAAAATTTCTATCAGCAACAAGGTAAATCTTCTCATAAATTTCAAGGTAACAAGTACTTTACCAATAAGTGTTATTCGGATCAGTCGCAAATAAATGTAAAAGGTATGAACGAGGAGGCATCGAACAAGCGTACAATGGATAATAGCGTCGCTTGCAGTAGCAAAAGTAGTTCTGCGGTAAATTTAAGTAAAGGCGAATCGTCTGTTAGCGATGTAAATTCGTATAAGTGTAAGAATTTGTCGAGTACTAATGGCCAAAGACTTGTAGCCAATAATAAAAGTATACAAGACGAGCGAAGTATACAACAATCTAACAATCATATTAAGCAATTTACTTACAATTATtccgacctaaggcagccctatGGTAATCATAGAAATGTAAGGAAATATcgatataacggtagatataatAGGGAAGAAAATTCTTGCAAAGAGAGACGGCGTCACCATCAGGCGTACAGCATAGAAAGCGATAGCAAAGAGGATAGATTTAAGGTAGAACTAGACCAGAATAGGAAATGCGACGAGTCGAAAGAGTATTCTAATAATGGGATCGGAGTTGAGCCAAGAGAAACGAACGAGAAAAGGCACAATTATAATGGATCTAGAGAACATAATAAAGAAAAAGATAAAATTAAATACTGTGAACCTGAAAACAAAGAGAAGGGAAATGAACACTGGAGATATAAAAGAGAAGTTAACGAAAAAATTTATACTCAAAAACGGAGGCAAAGTAGAAAATTACTAGTTGACGACGATGCAAGTCAGAGAGAGAGATTAACAGAGCAACTGAATAGAGGACAGTTGGAATGTTTAGTATGTTGCGAATATATTAAGCAGAATGATTATGTTTGGTCGTGTTCTAATTGTTATCATGTTTTACACTTAAAATGTATTAAAAAGTGGGCAAAATCATCGCAAGCAGAGAACGGTTGGAGATGTCCAGCGTGTCAAAATGTAAATTTAATCATTCCCGAGGACTATTACTGTTTTTGTGGAAAGGCAAAAGCACCAGAGTGGAATCGTAGAGATGTTGCGCACTCCTGCGGTGAAATTTGTGGTAGAACGTTATCAAAAAATAGTTGCCCTCACAAGTGCACTCTCCTGTGTCATCCAGGATCTTGTCCACAATGTACGGCAATGGTAACGAAATATTGTGGTTGTGGCAAAACTTCGCAAACAGTACAATGTAGTACGCATAAATTGTTACTGTGCGACTCTATATGTGGCAAAGATTTAAATTGCGGCAGACATAAATGCGAAGCTAATTGTCATTACGGAGAATGCGCAAATTGTGAAAAAACAATAACCCAAGTCTGTCATTGTGGTAAAAATACAAGGGAAGTAACTTGTCAGAGTAATGTTTCATCTACGTATTCTTGTGAAAATGTCTGTGGTAAATTGTTAGAATGCGGTAATCATACTTGTACAAAAATATGTCACACAGATGCTTGCGAACCTTGTTCTTTAAGCATTGAGAAAATTACAACTTGCTGTTGCGGGCAAACGCCGTTAACAGATAAAAGACAAAGTTGCTTAGATTTAATTCCCGTTTGTGATAAAATATGTTCGAAAAACTTAAAGTGTGGCCAACCTAATAATCCTCACAAATGTAAAGCAAAGTGTCATCAAGGAGATTGCCCTGCTTGTGATTTAACTACCGATGTCAAATGTCGTTGCGGAAATATGGATAGGGAAATAGCTTGTAAGGATTTAACATCAAAAGCTGATGATGCGCGATGTGAAAAAAGGTGCACGAAGAAAAGATCATGCGGCAAGCATAAATGTAATCAGCTGTGTTGTATAGAGATAGAACATATTTGTCCATTAatttgttctaaaacattaaccTGCGGTAGGCACAAATGCGAACAAAGTTGTCACAAAGGAAGATGTCCGCCTTGTTGGCATAGCAGTTTCGATGAATTATACTGCGAATGTGGAGCGTCTGTGATATATCCTCCGGTTCCCTGTGGTACGAGAAAACCTACTTGTGATAGACCTTGCTCTCGTCAGCGCGCCTGTGGGCACGAAGTATTGCATAATTGCCATAGCGAACCCATGTGTCCCCCTTGTACCGTTCTTACTCAAAGATGGTGCCACGGGAAGCATGAGCTACGGAAAGCTGTTCCGTGCCATTTAAACGAAATTTCATGCGGCTTACCATGTAACAAGCCTATATCTTGCGGTAGGCATAAGTGTATTACTATTTGTCATTCTGGACCCTGTGAAAAACCAGGACAACAATGTACTCAACCGTGCACTACTCCAAGGGAAATGTGCGGACACATCTGTGCTGCGCCATGCCACGAGGGTAAATGCCCAGATACACCATGCAAGGAAATGGTCAAGGTGACTTGTCAGTGTGGACACAGAACCATGTCTCGCGTGTGTGCCGAAAATTCAAAGGAATATCAGAGAATAGCAAGCAGTATATTAGCTAGTAAAATGGCCGACATGCAACTAGGACATTCTATCAATTTGGAAGAAGTTTTCGGTCTAGGGGCAAAGAAGCAAAATCAATTAAAAACTTTAGAATGCAACGACGAATGTAAACTAATTGAAAGAAATAGGAGATTGGCATTGGGTTTGCAAATTGTCAATCCAGATTTAGGTGGAAAATTAATGCCCAGATATAGCGATTTTATGAAACAATGGGCTAAGAAAGATCCGCATTTTTGTCAAATGGTTCATGAAAAATTAACAGAGTTGGTTCAATTGGCAAAAACCTCTAAGCAAAAATCGCGCAGTTATTCCTTTGATAGTATGAATAAGGATAAACGTCATTTCGTTCACGAGTCTTGCGAACATTTTGGTTGCGAGAGTCAAGCTTATGATCAAGAACCAAAAAGAAACGTTGTTGCAACTGCTGTAAAAGATAAGTGTTGGTTACCAAGCTATAGTTTATTAGAAATTATACAACGAGAGAATGGTCAGAGAAAAGTACCGGGTCCCATGTTAAATACTTTAAAAACCAATGGATCTGTAAAAACGATATTATCACTGCCCACGAAAAAAATCCAAAAATTAGAAACACCGTTTAATGTAAAAAACTCCGAACCAGAAATAGATTACTTTGATTATCAAGGTTAA
Protein Sequence: MATWDGSYSGPDDQNYYVYSDQNASESAARNWTFFPSDINNDYLRSNGEFYVQNERAFEQSNPNAFYHSNANVIPNLLTTTNSYCESATNSIDNAQVLSNQGYFPNIVKSEQQYYVPESSWKHNYDLKQEKTKHNFTRIVGEDKNSVANKSNLHVMAEEFVPNNKVSDDKREESQDTKTINGANSSIKDSNGDSDKYLFSNANRHERKYSNKRNLNYKPKEEQQDRYYKRNGYKNFYQQQGKSSHKFQGNKYFTNKCYSDQSQINVKGMNEEASNKRTMDNSVACSSKSSSAVNLSKGESSVSDVNSYKCKNLSSTNGQRLVANNKSIQDERSIQQSNNHIKQFTYNYSDLRQPYGNHRNVRKYRYNGRYNREENSCKERRRHHQAYSIESDSKEDRFKVELDQNRKCDESKEYSNNGIGVEPRETNEKRHNYNGSREHNKEKDKIKYCEPENKEKGNEHWRYKREVNEKIYTQKRRQSRKLLVDDDASQRERLTEQLNRGQLECLVCCEYIKQNDYVWSCSNCYHVLHLKCIKKWAKSSQAENGWRCPACQNVNLIIPEDYYCFCGKAKAPEWNRRDVAHSCGEICGRTLSKNSCPHKCTLLCHPGSCPQCTAMVTKYCGCGKTSQTVQCSTHKLLLCDSICGKDLNCGRHKCEANCHYGECANCEKTITQVCHCGKNTREVTCQSNVSSTYSCENVCGKLLECGNHTCTKICHTDACEPCSLSIEKITTCCCGQTPLTDKRQSCLDLIPVCDKICSKNLKCGQPNNPHKCKAKCHQGDCPACDLTTDVKCRCGNMDREIACKDLTSKADDARCEKRCTKKRSCGKHKCNQLCCIEIEHICPLICSKTLTCGRHKCEQSCHKGRCPPCWHSSFDELYCECGASVIYPPVPCGTRKPTCDRPCSRQRACGHEVLHNCHSEPMCPPCTVLTQRWCHGKHELRKAVPCHLNEISCGLPCNKPISCGRHKCITICHSGPCEKPGQQCTQPCTTPREMCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCAENSKEYQRIASSILASKMADMQLGHSINLEEVFGLGAKKQNQLKTLECNDECKLIERNRRLALGLQIVNPDLGGKLMPRYSDFMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDKRHFVHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIIQRENGQRKVPGPMLNTLKTNGSVKTILSLPTKKIQKLETPFNVKNSEPEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -