Xvio003063.1
Basic Information
- Insect
- Xylocopa violacea
- Gene Symbol
- pnr
- Assembly
- GCA_963969225.1
- Location
- CAXAJV010000005.1:146952-150405[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.11 2.2e+02 1.7 2.7 1 26 588 612 588 620 0.76 2 2 1.1e-17 2.2e-14 52.9 6.7 1 35 646 679 646 680 0.97
Sequence Information
- Coding Sequence
- ATGAAGGAGACGCTGACGAAGCAAGAGGCGAAACGCGAATGGGACGACGGTCGCGTCGGCGAGGATTCGCCAGGGATGAGAACGAGCGAGGAGCAACAACGCGCGGTCGAAAATTCTCGATCGGTGATCACGGCGAGGAGGCCCGTGCGCACGATCACCACGGCCGGGCACATAACCGAGACGGTCGCCGATCCCGAGCCAGATTCGCCGGATCCGAACGCGATGTCGGCGACCCTTCAACTCGAGACGCAACAATCGGtcgagcagcagcagcagcagcagcaacaacaagaTCAGCAAGAATGCGGGAAGCAAACGCCGCAACATTTCGTGCGTATTTCCCAGTCGGATGCGACAGAGATCGAGCAACAGTCGCACCGTTCGAGCGAACAGCGGATCGTCTATCTGACTAGCAACGGGCAGGAAGTGCAAGTCCAAGTGCCGGAAGGCGAGTTGGCGATGAAGGAGGCGGCCAGGTACGGGACACCGGATCGAGAGAAAACGGAGGAAGAACGCATGTACGATCGTATCTATTCCGGTCAGCACGACgcgcagcaacaacaacaacagttGAATCGGCGAGAGAATCACCACGGGGTAGCGGTTCGCGCGCAAGACAGACGAGCGATTCAGTCGAGCGGTCAGCAGAGGTTCGGAGGCTCGCGGGAAACGGCCGTTCAGTCGAACGCCGGTAACGGATCGATCGTGCGATCCTCCTATCATCAAGGTTCACCGGTGCTGGTGGCCAGTTCCGGGGAGGAGTACGAGGCTGGCTCGACCGGCCCTGTATCGTCGCACGGTGCGGTGACGGTGAACGTGCAATTGGACTCGTCGGGGGCGACGACGGCAACGGCGACCACGGCGGCGCCTGCTTATTCCCCGCCGATCGACGACGGTGGCGGTATACGGACAGGGACGAGCGGACAACAGGAATCGAGTCAGCACCACCatcatcaccatcatcatcatcagcaacagcagcagcagcaacagcaacagcagcaacaacagcaacatttgataggcggcggcggcggcggcggcggcggcggttacACCGTAAACACCGGGACCGGGGCGAACATCAAGTACGAGCAGACGGAAACGAGCAACGCGGTCGCGGTCTCTTTAGCGGTCGCCGCGGAGAACATCAAGGTGTCGAGCACGTACACGACGCTGGAGACGGTACCGATTCCTCCGTCGCAAGCGGTGCAATACTCGCAGTACATAACCGGGAACGAGACGTTTCACCAGACACCGACGTACGCCTATTCCAACAAACCCGGCGATCAGGTGATCTTTGCTTATCCACCCTCGGCGCCGTTGACCAGCCGCGTATCCGGGGTGGAGTCTCCCGGTGGCACGAGCGCGTACATAAAGGGCGATCCGACGTTGGCCTCGCTCGGCGGCGGTACTCGAGGGGTGGCCGCGCTTCACTACGAGCAGCCGGCATCGCCCGGATCCCAGGTCTCGTTGTACGCCGGTGGTTCCGGTTCGGCCTATCCGGGGTACGCGAAGCCAGCCTCCTCGAGCGAATACTGGACCACCGCCGGCACTCCGTCACCGCCGACGTTCGATTGCGGTCAGAGCTACCAGAACGTGACCGCGATCCCGGTCGGCGACGCGGCGAACATACAGCTCTACTCCGGCGGCGGTTACAGCGTGTCGACCGGCAGCACCGCCGCTCCGTCGCCGTGGTCCGGTCTGCCGCTCTCCGGTCCGGACGAGAACTTCGACATGATGACCACCGATCCGAAAGAGTGTTCCGGCTGCGCGGCTCCGACCACCATATGGAGAAGGGACGACAACACCGGCCATTACTACTGCCACAATTGCCTCTACAAGGCGACGAACGGGGTTAACAGACCGCCCATGAGATGCGGCAAACCGAAACAGCCGGTAGCGCCGACGGGCGTGCGACGAACGGGCGTCCAGTGCGCCAATTGCAGGACGAGCAACACGACCTTGTGGCGGCGAAACAACAACGGCGAGCCCGTGTGCAACGCCTGCGGCCTCTACTTCAAGCTGCACAACGTGAACAGGCCGTTGAGCATGAAGAAAGAGGGGATACAGACGAGAAAGAGGAAACCGAAAAATCATTCGGGAATGGGTGGAAGCTTGGCGGGACCGAGCGGCATGCACAAGACCGAGCTTAAACCTAGCGTACTCGTGGACTCGGTGCAGTTGAACGTGTACGGGAACGGGAGCGGTAGCGGTAACGGGGGTGGGATGGGACCGGAGGCCGAAACCGAGGCACAGCCCGATGATAGAGGGAACAGGGCCGAGAACGAGACCGGAAGCGGTACCGGATCCGTAGACGAGCGCCGTCTACCCGTAGGTACACCGACCACGGCGCAATTGGGCCACGCTCATTCTCCCCTCGCTTTGCCCACCGCTGCCGTGCTAAATCGACAGGCTACGCTTATTGTGCCACCGCTAGAGCCAATCGCTAGTCAACCCGGTACCGATACGATCTCCGTCATAACTTCCACCACGGCGGTTCACGTCGAGATGGCGTAA
- Protein Sequence
- MKETLTKQEAKREWDDGRVGEDSPGMRTSEEQQRAVENSRSVITARRPVRTITTAGHITETVADPEPDSPDPNAMSATLQLETQQSVEQQQQQQQQQDQQECGKQTPQHFVRISQSDATEIEQQSHRSSEQRIVYLTSNGQEVQVQVPEGELAMKEAARYGTPDREKTEEERMYDRIYSGQHDAQQQQQQLNRRENHHGVAVRAQDRRAIQSSGQQRFGGSRETAVQSNAGNGSIVRSSYHQGSPVLVASSGEEYEAGSTGPVSSHGAVTVNVQLDSSGATTATATTAAPAYSPPIDDGGGIRTGTSGQQESSQHHHHHHHHHQQQQQQQQQQQQQQQHLIGGGGGGGGGGYTVNTGTGANIKYEQTETSNAVAVSLAVAAENIKVSSTYTTLETVPIPPSQAVQYSQYITGNETFHQTPTYAYSNKPGDQVIFAYPPSAPLTSRVSGVESPGGTSAYIKGDPTLASLGGGTRGVAALHYEQPASPGSQVSLYAGGSGSAYPGYAKPASSSEYWTTAGTPSPPTFDCGQSYQNVTAIPVGDAANIQLYSGGGYSVSTGSTAAPSPWSGLPLSGPDENFDMMTTDPKECSGCAAPTTIWRRDDNTGHYYCHNCLYKATNGVNRPPMRCGKPKQPVAPTGVRRTGVQCANCRTSNTTLWRRNNNGEPVCNACGLYFKLHNVNRPLSMKKEGIQTRKRKPKNHSGMGGSLAGPSGMHKTELKPSVLVDSVQLNVYGNGSGSGNGGGMGPEAETEAQPDDRGNRAENETGSGTGSVDERRLPVGTPTTAQLGHAHSPLALPTAAVLNRQATLIVPPLEPIASQPGTDTISVITSTTAVHVEMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -