Xvio003062.1
Basic Information
- Insect
- Xylocopa violacea
- Gene Symbol
- GATA-B
- Assembly
- GCA_963969225.1
- Location
- CAXAJV010000005.1:131275-141612[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 3.4e-14 52.3 3.2 1 34 776 808 776 810 0.97 2 2 9.8e-18 2e-14 53.1 3.9 1 35 830 863 830 864 0.98
Sequence Information
- Coding Sequence
- ATGTTGACAGAGTTGACCAAGTACAACGTCGATGACAACGACGGAACGGATGAGAGAGTCATGGAGATTGTCGGCGATAACATCGAAGGGAACAATGGCGGAGGAACGATTAGGCTGTTACGGTTAGAGAGTAGAGCGGTCGATCTTTTTCGGCGACCAAAGCTGGAGCAAGAAGAACGGGAAACGGAGCGAGAACGAGACCGGGAACGGGAACGCGAACAACAGCTGGATTACGGAAAGCGTGGAAGCGAGCAAGGCGGGGTCATTGTGGGCGTGCTGGAGGCGGGCCAACGGGCAATTGAAAATGGCGCGATCCCAGAGAGAAGCAACGTTCAACTGGTGGCAATTCCCGTTTCAGCGGAGCACCACGGAAACGATGTCAGCGCCGCCTATGGCTTGCACTCCCTCGGCTACGATTACCACGATTCCGTCCTCCGTGAAagGAGCCGATACGCGGCATGTGACGAACCAggcgacgattcgtcgccgaggGAGCACCATCATCGGGAcgagcagcaacagcaacagcaacgAGTTTCCGAAGACCCCCACCAAGAACACCACCACCGCCATCGGTCCGAGTACGTTCAACCGGGGGCGAGAGAAGTATCGGTTACCGAGGGTGGGGATAACGGACGGTCGAGCGAGGTCTCCGTGGTGCCGGAGGAAAATCGGCCCGGCAGTCACGCGCCTCGCTCTACGATGCATCGTTACGGTACCGAAGCACTCTCGCCGACCACGACCgatcaccaccaccaccagcaACACCACCTCCATCCACGGCATCATCATCACAATCATCATCACCCCCATCAACAACATCatcagcagcaacaacaacaacaacaacaagagCAACACCATCACCATTTGGAGTCGGAGGTGACTCAACGCAGCGCGCTTTCTTCGACGAGTGATCACCACCACCGTCCGGACGAGCAAGAGATACGATCGCAGTCGCAGGCCGCGCAACCGGTGGCGCATCGAGAAACGATCGAGGAAGACGCGGAGAGAGTGAACGGAATCGCGACGGTCATGAGAGGGGCTCGCGGAGAATTCGCCCTCGGTGTGCTGTTCCCGAATCTAACCGGTACCGGTGCGAGCAATTCCGACAGCGACGTCGGGGGGAACGACGGTCATCATCAGCATCACCAGCATCATCAGCACCAGCATCAACACCAgcatcaccaccaccaccaccaccatcaaTTGGAGGAGGTGTTGCCGGAGGACGCGTACCTTCAGCATCAGATGAGAACCGGCAGAGGTGGTAGCGGGAACGGTAGCAACGGCGGCGATGGAAGCTGCGGAGCCACGGAAACCGGCGGAGGCGGCGGTTGCTCGCCAACGTTACGTACCGGCAGTTCACCCGGTTCTAGCCGTAGTCCGCGCGACGATCAGAGACTCTCGTCGCCGCATCGTCAAGGGCAAACGGACGGTGGATACAGTCCCAGCGATCAGGGCAGACAGTCGTACGCTCATCTGACGGCCATGCAACCGCAATCCTCGGTGCAGACCAATCACGGTCTCGCTCAGGACGCCGATCGTGTTTCCGAGCAACTTTACATGGACTCGATCTACGCTCATCACCACCACCATCACcatcagcaacagcagcagcagcaacagcaacagcagcagcaacagcaacaacagcaacagcaacaagaGCACGAGTCCGGCTCGTCGACGCCGCACTCGCCGAGCGGCCCGCTCTCCAGCCCGTTGTATCGTTCGATGACCGGCATCAGCGGTATGACGACAGCCAGCGCGGCGGGAACCGGAGGTAGTTACAGTCTGCCTTACATGGCCGCAAGCCCCACGGAATTGACCGCCTCACCTCAGCAGCTGTGGAACGCGCCAGGATTGGGCACGGCTCTTCCCGCGATTTCGGAGGATtacggtggcggcggcggcggcggcggcggcggtggtggcggcggtggcggcggcggcggcggtggtggcggcggcggcggcggtggcggcaagTCATCGGGTACGGTGGTGACTCATCAAACGTTGCCGGGATTTTCGCAACCATTTTGCGGTAGGGCGAGTTTTCGAGGGTACAGCCAATCGTATCCGACGCAACAGAGCAACGTCGGAGTCGGGGTCGGGGTAGGAGCCGCCGGCACGGTCGAAGCCACGTCCTGGAGTTACGTTTCACCTTCGAGCGATTCGCTGACGACCCAATACGCGACTCCTTCGAGGCGACAGGCCGTCAACCCGGTGTCGACACCCGCGCAGCATCAGCTCACCGCCACCGCTAGTCTTAGCGCGATGCACAACATCGAGGCGGAGTACTTTACGGAAGGTCGCGAGTGCGTAAATTGCGGGGCAATTTCCACTCCACTGTGGCGGCGAGACGGTACCGGCCACTACTTGTGCAACGCGTGCGGCCTCTATCACAAGATGAACGGGATGAATCGACCCTTGGTGAAGCAGCCACGGCGTTTGTCCGCGTCGAGACGAGTGGGCACTTGTTGCTCCAACTGTCAAACAACGATGACGTCGTTGTGGCGTCGCAACACCTTAGGTGAGCCAGTGTGCAACGCGTGCGGCCTCTATTTCAAATTGCACGGCGTGAATAGGCCTCACACCATGAAGAAGGACAGCATACAAACGCGAAAGAGGAAACCGAAGGGTGGCATGAAATCTATGGATACACCGATCGCTGGGACCGTCGTGTCCTGccccaacaacaacaacaacaacaacaacaacgggAACGCGACCACGGTAAACAACGCGAATAACAACAACAATAACAACAACAatagcagcaacaacaacaacaacaataacaataacaacAGCTTAAAATTGGAGCTAAATACGTACGGTGATCTGAGGATGAGCCACGGCGGAGTAGCTCAGGTGAGCTACGGAGCTAGCACCCTTTACGGTAGCCCTCAATCCTCCAGTCGGATCGTTTCCTATCAATCGACCGCCACACCGGGAATGTATTACGACATGATCGCGcctcagcagcagcagcagcagcaaccaccgcaacaacaacaacaacaacaacagcaacagcaacaaccaCCGCAGCAGCATCAACACCAACAACTTCTCGAGACGCAGTCTCCGAAAGTCGAATGTCCGTCACCGCCTTGCACGAATCGATCGCCCGTTATGATGTccgcgaatcattcacccgatcaTCATCAACTCGCGTCACCTCACATCGTCGCTCTCGGCAATTCTTCGCCGAAAATCATTTTGGACAACGGCCATTTGGACAGATCGGTGGATAGACCCACGGTTGTCTCGATATCGTCTTAA
- Protein Sequence
- MLTELTKYNVDDNDGTDERVMEIVGDNIEGNNGGGTIRLLRLESRAVDLFRRPKLEQEERETERERDREREREQQLDYGKRGSEQGGVIVGVLEAGQRAIENGAIPERSNVQLVAIPVSAEHHGNDVSAAYGLHSLGYDYHDSVLRERSRYAACDEPGDDSSPREHHHRDEQQQQQQRVSEDPHQEHHHRHRSEYVQPGAREVSVTEGGDNGRSSEVSVVPEENRPGSHAPRSTMHRYGTEALSPTTTDHHHHQQHHLHPRHHHHNHHHPHQQHHQQQQQQQQQEQHHHHLESEVTQRSALSSTSDHHHRPDEQEIRSQSQAAQPVAHRETIEEDAERVNGIATVMRGARGEFALGVLFPNLTGTGASNSDSDVGGNDGHHQHHQHHQHQHQHQHHHHHHHHQLEEVLPEDAYLQHQMRTGRGGSGNGSNGGDGSCGATETGGGGGCSPTLRTGSSPGSSRSPRDDQRLSSPHRQGQTDGGYSPSDQGRQSYAHLTAMQPQSSVQTNHGLAQDADRVSEQLYMDSIYAHHHHHHHQQQQQQQQQQQQQQQQQQQQQEHESGSSTPHSPSGPLSSPLYRSMTGISGMTTASAAGTGGSYSLPYMAASPTELTASPQQLWNAPGLGTALPAISEDYGGGGGGGGGGGGGGGGGGGGGGGGGGGGGKSSGTVVTHQTLPGFSQPFCGRASFRGYSQSYPTQQSNVGVGVGVGAAGTVEATSWSYVSPSSDSLTTQYATPSRRQAVNPVSTPAQHQLTATASLSAMHNIEAEYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGTCCSNCQTTMTSLWRRNTLGEPVCNACGLYFKLHGVNRPHTMKKDSIQTRKRKPKGGMKSMDTPIAGTVVSCPNNNNNNNNNGNATTVNNANNNNNNNNNSSNNNNNNNNNNSLKLELNTYGDLRMSHGGVAQVSYGASTLYGSPQSSSRIVSYQSTATPGMYYDMIAPQQQQQQQPPQQQQQQQQQQQQPPQQHQHQQLLETQSPKVECPSPPCTNRSPVMMSANHSPDHHQLASPHIVALGNSSPKIILDNGHLDRSVDRPTVVSISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -