Basic Information

Insect: Xylocopa violacea
Gene Symbol: ZNF236
Assembly: GCA_963969225.1
Location: CAXAJV010000004.1:33205011-33212701[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00099 0.08 13.6 2.3 2 23 174 195 173 195 0.96

2 26 0.00012 0.0099 16.5 1.1 1 23 201 223 201 223 0.98

3 26 3.6e-06 0.0003 21.3 0.4 2 23 229 250 229 250 0.97

4 26 0.0087 0.7 10.6 0.2 3 23 258 278 256 278 0.96

5 26 7.9e-05 0.0064 17.1 0.9 2 23 289 310 289 310 0.98

6 26 1e-06 8.1e-05 23.0 0.7 1 23 331 353 331 353 0.99

7 26 1.4e-05 0.0012 19.4 0.8 1 20 359 378 359 381 0.95

8 26 0.00012 0.0097 16.5 0.5 1 23 387 410 387 410 0.94

9 26 0.00029 0.023 15.3 2.7 1 23 419 442 419 442 0.98

10 26 2.2e-06 0.00018 22.0 2.1 1 23 568 590 568 590 0.98

11 26 0.00037 0.03 14.9 3.3 1 23 596 618 596 618 0.99

12 26 0.0012 0.099 13.3 3.0 1 23 624 646 624 646 0.97

13 26 0.0032 0.26 12.0 6.7 1 23 738 760 738 760 0.98

14 26 3.9e-05 0.0032 18.0 5.1 1 23 766 788 766 788 0.99

15 26 3.1e-05 0.0025 18.3 1.3 1 23 794 816 794 816 0.98

16 26 0.00047 0.038 14.6 7.6 1 23 822 844 822 844 0.98

17 26 0.52 42 5.0 0.8 2 23 1235 1256 1234 1256 0.95

18 26 0.00033 0.027 15.1 3.1 1 23 1262 1284 1262 1284 0.99

19 26 0.0016 0.13 13.0 0.7 2 23 1291 1312 1290 1312 0.96

20 26 1.2e-07 9.8e-06 25.9 1.4 2 23 1392 1413 1391 1413 0.98

21 26 0.00085 0.069 13.8 3.5 1 23 1419 1441 1419 1441 0.99

22 26 0.00011 0.0089 16.6 1.9 1 23 1447 1469 1447 1469 0.98

23 26 0.00045 0.036 14.7 2.5 1 23 1475 1497 1475 1497 0.98

24 26 6e-06 0.00049 20.6 0.3 2 23 1713 1734 1712 1734 0.97

25 26 1.6e-05 0.0013 19.3 4.5 1 23 1740 1762 1740 1762 0.98

26 26 3.2e-06 0.00026 21.5 1.1 1 23 1768 1791 1768 1791 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00099	0.08	13.6	2.3	2	23	174	195	173	195	0.96
2	26	0.00012	0.0099	16.5	1.1	1	23	201	223	201	223	0.98
3	26	3.6e-06	0.0003	21.3	0.4	2	23	229	250	229	250	0.97
4	26	0.0087	0.7	10.6	0.2	3	23	258	278	256	278	0.96
5	26	7.9e-05	0.0064	17.1	0.9	2	23	289	310	289	310	0.98
6	26	1e-06	8.1e-05	23.0	0.7	1	23	331	353	331	353	0.99
7	26	1.4e-05	0.0012	19.4	0.8	1	20	359	378	359	381	0.95
8	26	0.00012	0.0097	16.5	0.5	1	23	387	410	387	410	0.94
9	26	0.00029	0.023	15.3	2.7	1	23	419	442	419	442	0.98
10	26	2.2e-06	0.00018	22.0	2.1	1	23	568	590	568	590	0.98
11	26	0.00037	0.03	14.9	3.3	1	23	596	618	596	618	0.99
12	26	0.0012	0.099	13.3	3.0	1	23	624	646	624	646	0.97
13	26	0.0032	0.26	12.0	6.7	1	23	738	760	738	760	0.98
14	26	3.9e-05	0.0032	18.0	5.1	1	23	766	788	766	788	0.99
15	26	3.1e-05	0.0025	18.3	1.3	1	23	794	816	794	816	0.98
16	26	0.00047	0.038	14.6	7.6	1	23	822	844	822	844	0.98
17	26	0.52	42	5.0	0.8	2	23	1235	1256	1234	1256	0.95
18	26	0.00033	0.027	15.1	3.1	1	23	1262	1284	1262	1284	0.99
19	26	0.0016	0.13	13.0	0.7	2	23	1291	1312	1290	1312	0.96
20	26	1.2e-07	9.8e-06	25.9	1.4	2	23	1392	1413	1391	1413	0.98
21	26	0.00085	0.069	13.8	3.5	1	23	1419	1441	1419	1441	0.99
22	26	0.00011	0.0089	16.6	1.9	1	23	1447	1469	1447	1469	0.98
23	26	0.00045	0.036	14.7	2.5	1	23	1475	1497	1475	1497	0.98
24	26	6e-06	0.00049	20.6	0.3	2	23	1713	1734	1712	1734	0.97
25	26	1.6e-05	0.0013	19.3	4.5	1	23	1740	1762	1740	1762	0.98
26	26	3.2e-06	0.00026	21.5	1.1	1	23	1768	1791	1768	1791	0.97

Sequence Information

Coding Sequence: ATGAAGGTAAAGATGTTGACGAGACACAATGCAATTACAGAGTCATCTCATGTCGAGGCAATACCTATAAACCTTGTCACTACCGAAGATGGTCGAACTCTTTTAGCAGTGACTGaacatAAAGACGGTatgttggaaattgttgcagctCCGATTACTCTTATTGGACAAAGTGCATCAACCGCACCATTGGTAGATGTAAAAAATCTGAATGGAAATTTGATATTACACTCGCCTGTTTTTCAAATAAATCTTGATGATATTGTCAATGGTGTGGAACTTCAACAGTCGGTGCAAAATGTTGAAACTGAATCCAATAATGTAGAACAAATTAAGTTGCAATCATGCATAGAGGCACAGTACAAGAAGACTGATACACAGGAGTATCAATCTCTTTCTGAAAATGATTCATTAGTTAATGAGAAGAATGACAAAATTTGTAAACAAAAATCAATAAGTCCAATTGTGAAAAGAAATAATCCTGGAAGACCCAAGAAAAGTGCGGGTGCAGACAGTTTAAGATGTGACATTTGTCATCAAGAATTTGTTAAGCAAACGTTGTATCGTAAACATATGGAAAATCATGCAGAGGAGAAACCACATAGATGTCCAAAATGCTCTGCCTCGTTTAATGTACCGACAAATTTTACACTTCATATGGCAACACATAATACAGGTGAACCAAAGTGTCCAGAATGTGGTAAAAAATTTGCAAGAATGGCCAGTTTAAAATCTCATATGCTGTTACATGAGAAAGAAGAAAACTTATTCTGTACAGAATGTGAGGATGCTTTCTCAACAAAAGCTCAGTTGGATGCGCATTTAAAACTTCATGGGGAAAAGTGGACATCCGAGGAAGTGCGGAAATGTAAATTATGTAATAAACAATTCAGTCAACCAGCCCTGTACAGGCTTCACATTCGTGAACATTATAGATTGCAAACAAAGATAGTAAAACAAACAAAAAGAGGGACAAAACACAAAACAATGTACAAATGTACTATATGCTTGAAGGTCTTTCAGAAACCAAGTCAGTTGATGCGTCATATTAGAGTACATACAGGTGAAAGACCCTTTAAGTGTACAGTGTGTGATCGTGCATTCTCACAAAAAAGCTCACTGCAAATTCATACTTGGCAACACAATGGTATTCGACCTCATGCTTGTGGACTCTGTAATGCCAAGTTTAGTCAGAAAGGTAATTTAAATGCTCACATAACAAGAGTTCACAATGTCCCAGAAGGTGAGCCCATATACGAGTGTAATTATTGTTCGTGTGTATTTAAAAAACTCGGTAGTCTGAACGGCCACATGAAACGCATGCACACTGACATAAACGAGGAGAGCTGTGCTGTTGATAGCACTCAGTCTGCTGATATTGTAGAGTCTGATGCAACGATACGTGCAACTGTGGATAGTGTCATAACACAACTGGCATCTTTGGAATCTGACTCACATGAAACTACAAAATCATCAAATTTCGAATCGTGTATATTATCAGAAAGCAAAAAGGATATTCTGCAACAAGCATTGAAAATCAGTGGTCTTCCtagtaaaaataaaattattccTGAGGGTACATCGGAAACCAAAAGGCTCGAGACTCGTACTAATTTTGTCACATTATTGGATCGAGCACCCGATGGTGATACAAGGAAGTATTTGACAATAAGACAAAGATGTGTAGGAAACGTAAGATGGTACGCATGCACTTTCTGTCATAAAGAATTTAAAAAACCGTCGGATTTGATACGTCATTTGCGTGTACACACGCAAGAAAAACCTTTCAAGTGCACGCACTGCTATCGTTCGTTCGCTTTAAAATCCACTATGATAGCTCACGAACGTACCCATTCAGGTGTTAAAAAATATGCTTGTAAATTTTGTGACAAATCATTCGTATGCCATGGTAGCTTAATTGCCCATATGAGATTGCACGAAAAATCTGAAACCCCTTCTAATAAATCTGCTAATAACGACAAGGATACTGACGTGCACGCCACAAGCGATACTGATATTTATTCTGCTAATCGGCTGAAAACTCAAACAAAGGGAAAATCAAAATTATCCCTGGAAGCAGAAAGTCTAGTACCTCAAGTGATTTTGCAAGAACCATTGGTAATAAGTAATGCAGGAAATAAAATTTGTGTGGCACAAGTACCATCGAAGGCAAAACGCGTTTATGATGCCAATGCTGATCCCGCCAGACCACACAAATGTTGGATTTGTCAAGCGGCATTCAGAAAGATCAGTCATTTGAAGCAGCACCATCGTCGTCATACGGGAGAACGTCCGTATAAATGCACGAAATGCGATAGGAGGTTTACATCGAATAGCGTTTTAAAGTCACACTTGCATACACACGAAGATTCGAGACCGTACAGTTGCTCTATTTGCAGTGCAAAATTCTCCACACAAAGCAGCATGAAAAGACACTTGGTTACTCATAGTAATAAAAGACCGTTTATGTGTCCTTATTGTCATAAAACTTTTAAAACTTACGTTAATTGTCGGAAGCACATGAAGATACACAAATATGAATTGGCGCAACGGCAATTGGAACCACAAAAGTACAGAATGCAAGAACAAGTTTCAGATAATTCGAATTTGAAGGAAAATTCTAATGAAGAAGCGGCCTTCGAACCTTCTTCCTCCTCTTCCGTCTCTATTACTACTATTAATTCTGCTATCACTAGCAACATCTCCGTCATTACCACCACCACACCTACTATCGCCACAACGTCCTCTTCTACGTTTTCAGATAATCTTGCACTTTCTCGTCTTGGGCCAGTTGAGCTATCGTTTCAATCACAACTTGGGTCAGAGTTTTCACAAACTTTTCCTGAGTTTCAAAATATAGCTGgagaaaaagagaaaagaagGCCAGTTATATCCACCAATTGTGATACTACATTTATTAATGATAATGTGTCGGAAATAGCTGTAATGAATCTTGACAACTCACAAATGTTAAACGCCGATGAAGCTGGTTCAGTCACGCTGCCTGTTTATTCTAACGATCGGGCACTAACTCCAGAAAGCATAAGAGAAATAGAAGAAACTTTAAGCCAACAATTATTTAATATTGGGATGAACCTTGGCTTAGGGACTAATCATTCCAGGCACTCGAGCAGTATGAATACAAATGACATGAGCCATATAAAAGagcaacagcagcaacagcaacctGTGCTGAATGTTATATACGAAAACAACAATAGCAATAGTGGCAATAATAATGTGGATACGTCTGGTGGACATGTTTTCTCTTCGCAGTTAGATTCATTCGAGATGGATCATATTGCATTGCAATCGGATACTGAAATCGATATTGGATTAGATGCAAGCAATCCAGCTAGTATCGCAACGAGTATTCTACCTACGAGCACAAAAGAGGACCATCGACTATCTGTTTGTGTTGGAACACCAGATAATATAAACGATGATCAATCAGAAAGGTCTAGTATGCAAGCAGTAGTATTCATTTCCCAGGGAAATTTTTCAAAAACCGACGGGTCGGCGAATGAACTAGCAGTGGAAGAAACGGACAAAGATAGTATGCAACAACAATGTACAATCAACCCTATATTTTTAACAGAAGAGTTTCGAGGAACATCAGAAGATTTCAAGGTTCGACAAAATGTGCATACAGTATCGTCCGATGTTCACGATATTGTCAAAACTGGAGGCGAATCTCTGTTACAGTGTCATATGTGTAATCAGCAGGGATTCACAGCAATTGGATTAAAGGAACATTTAACAAGTCATCGTGGAACGAAAGAATATCAATGTACGGAATGTTCTTCTAGATTTTGTACAAACGGTGGATTGAACAGACATACGAAGATACATGTTGTTAAACAATCATTAAAATGTTCATCCTGTGAGAAGCAGTTTAATAACAGAATAGAACTGCAGTCACATGCTAAGATTCACGAAACACCGATGTGGACTAGTGTATCCTCTGGAACAAATAACGTTACAAAAAAGCCAACATTTTCATCAGATGTACAACCGGTTGTAAGTGGTCATTCATCCTTAAACAGTATCGTAATAGATTCTGATTCTGCCGTTTCTGAGAAAGTTCTATTAGATACGGTGGCAGAAAAGGCAGTGATGGATCGAGTAGAAAATATTTTGATGGAGACAAAGGAACGGAAAGAATACACGAACAAGTGCAAGTATTGTCCAAAAACTTTTCGTAAACCAAGCGATCTCATTAGGCATGTGCGCACTCATACGGGTGAACGACCGTACAAGTGTGATTATTGCAGTAAAAGTTTTGCTGTAAAATGTACTTTGGATTCGCACACAAAAGTTCATACAGGGAAAAAAACGTTTCGTTGTCACGTGTGTAATAGTCTGTTTGCGACTAAGGGTAGTTTGAAGGTTCATATGCGTTTACATACAGGTTCAAAACCATTTAGATGTCCTATTTGCGATTCAAGATTTCGAACTTCTGGCCATAGGAAGGTACACTTATTGAAACATGCACGCGAATACAAAGATAATCTAAAAAGAAAGCCAAAGCATTACAAAATTGCGGCCATAGCCGAAGTGGTGGCTGATCTCGAGAAATGTGACGGAAAAACAGAGGAAATGAACAGCTTCGTGACAAAACAGCAACTACCGCAAGAACAGCTTTCGCAAACGACTACAGGGTTACCTTCTCATTTCGAAACATATAGTATTGAGACGGCTGCTTCGTGTTTATCCGATCAAATTAACTTTGATCCTGACGGTATTGTATCCAACAACAATCAAACGATAGTGTCTCTAAATGAGAGCAATCAGTTggttacgaatttacattttcttTTGACAAACGGACTTGTTACTATTCAAACTGAAGAATCGTTGTTACCGCAATCATCGGGTGTATCATCGACTACTAACTCGCATCATCCGTCGGTTGTGATGTCGGACTGTGGGAGTGTGTCTACACTCGAAGTTGCATCCGATTCTAATAACGATCAAACTAAGGAAAAAGTTCACATAGGACAAGTGTTGGAAACACCGTCGAGTAATTGTCTTTTAACCGTGGCAACTACAGCCACGCAAATGGAACCATTCTTGAAGGTACCAGAGGAAAAGGTAACGCGTAAACCACCAACCAAAGGGAATTTGTCCAAAAAAGAGTGCGACATCTGTGGAAAAGCATTTACAAAACCGTATCAAGTCGAAAGACACAAACGAATTCACACAGGCGAAAGACCTTATAAGTGTGATTTATGTACGAAATCCTTCGCGCAGAAATCAACTCTACAGATGCATCAGAAACACCATACTGGCGATCGTCCGTACGCTTGCTCCTATTGTGAATATTCTTTCACTCAGAAAGGTAATCTTCGAACACATGTTAAACGTGTCCATCAATTGGATACTGTTGACGTGAAAAAGTGGAAACGGGCACGTCAATCGTTTGCACCTAAGTCATCTTTTCAAGAAAACACGATCGAGGCTAAAAGTCTGAATTTAGACGACATATCATTCGTCGAATTTCTTAAGTAG
Protein Sequence: MKVKMLTRHNAITESSHVEAIPINLVTTEDGRTLLAVTEHKDGMLEIVAAPITLIGQSASTAPLVDVKNLNGNLILHSPVFQINLDDIVNGVELQQSVQNVETESNNVEQIKLQSCIEAQYKKTDTQEYQSLSENDSLVNEKNDKICKQKSISPIVKRNNPGRPKKSAGADSLRCDICHQEFVKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWTSEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKVFQKPSQLMRHIRVHTGERPFKCTVCDRAFSQKSSLQIHTWQHNGIRPHACGLCNAKFSQKGNLNAHITRVHNVPEGEPIYECNYCSCVFKKLGSLNGHMKRMHTDINEESCAVDSTQSADIVESDATIRATVDSVITQLASLESDSHETTKSSNFESCILSESKKDILQQALKISGLPSKNKIIPEGTSETKRLETRTNFVTLLDRAPDGDTRKYLTIRQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHSGVKKYACKFCDKSFVCHGSLIAHMRLHEKSETPSNKSANNDKDTDVHATSDTDIYSANRLKTQTKGKSKLSLEAESLVPQVILQEPLVISNAGNKICVAQVPSKAKRVYDANADPARPHKCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYSCSICSAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKYELAQRQLEPQKYRMQEQVSDNSNLKENSNEEAAFEPSSSSSVSITTINSAITSNISVITTTTPTIATTSSSTFSDNLALSRLGPVELSFQSQLGSEFSQTFPEFQNIAGEKEKRRPVISTNCDTTFINDNVSEIAVMNLDNSQMLNADEAGSVTLPVYSNDRALTPESIREIEETLSQQLFNIGMNLGLGTNHSRHSSSMNTNDMSHIKEQQQQQQPVLNVIYENNNSNSGNNNVDTSGGHVFSSQLDSFEMDHIALQSDTEIDIGLDASNPASIATSILPTSTKEDHRLSVCVGTPDNINDDQSERSSMQAVVFISQGNFSKTDGSANELAVEETDKDSMQQQCTINPIFLTEEFRGTSEDFKVRQNVHTVSSDVHDIVKTGGESLLQCHMCNQQGFTAIGLKEHLTSHRGTKEYQCTECSSRFCTNGGLNRHTKIHVVKQSLKCSSCEKQFNNRIELQSHAKIHETPMWTSVSSGTNNVTKKPTFSSDVQPVVSGHSSLNSIVIDSDSAVSEKVLLDTVAEKAVMDRVENILMETKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREYKDNLKRKPKHYKIAAIAEVVADLEKCDGKTEEMNSFVTKQQLPQEQLSQTTTGLPSHFETYSIETAASCLSDQINFDPDGIVSNNNQTIVSLNESNQLVTNLHFLLTNGLVTIQTEESLLPQSSGVSSTTNSHHPSVVMSDCGSVSTLEVASDSNNDQTKEKVHIGQVLETPSSNCLLTVATTATQMEPFLKVPEEKVTRKPPTKGNLSKKECDICGKAFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACSYCEYSFTQKGNLRTHVKRVHQLDTVDVKKWKRARQSFAPKSSFQENTIEAKSLNLDDISFVEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -