Xvio012450.1
Basic Information
- Insect
- Xylocopa violacea
- Gene Symbol
- CSRNP3
- Assembly
- GCA_963969225.1
- Location
- CAXAJV010000019.1:11616405-11620891[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.009 1.8e+02 2.0 0.9 51 95 101 145 51 177 0.68 2 3 0.11 2.1e+03 -1.5 1.7 45 110 379 445 370 496 0.60 3 3 4e-101 8.1e-97 323.6 8.3 1 218 740 950 740 950 0.92
Sequence Information
- Coding Sequence
- ATGGAATTGCCTTCGGCCCGGGATCATCTTGTTGAGGCCCAAGGTTCTTCCACCTCGATAGAATCGACGGGAACGGTGACGGCGTCGACCGCGTCGTCGCCAACGAGGACCACGTCGGGGATCGCGTCCGCGAAGCTGGACAAGGACGCCGATCTCGCTAGCAGCCCGAAGAAGGAAACGCGCGATGGCGGTGTAGAATCGCGCGAGGCTTCGCTCGCCTCCCTCGAGGGCCCCAGCGACTCTTCGCCCGACGAGGTTCAAGCGGACTCCAGCGAGATGGGTCTGAAACTGGGCAGGACGACGAAACAGAACGagaacacggagacggaggaggaggaggagaagaagaagaagaacgcggcggcggcggtggcggcagaGACGAGATCGGACGAGCTCGTCGAACAGGACGAGCAACGTTCCTCCGAGGCGACGTCCACGCCGGTTCAGTGCGTCGAGAGACAGACGGAGGATTTGAAAGTGATCGTTGGTGGTGGTTTCGTCGCGTCCTCGCCGATATGTAGGAAGAGGCCGGCCAGTGATTTCCTGCCGATCGACGCGGAGATCAAGAGGATCGGCGTCGAGACGCCGGAGAACGAGACGAACCAGGTGAGGAGGATCTCGCCGGTGCTGGTCAGCCTTCGAGAGCGTACCCTCGGCGAGATATCGCTGTCCTCGAGCTCCTGCCTGTTCGACGACAACGCGAACGATCGACGCGTCACCAGGAGCAATCGGACCCCCGACGATTCGTCGTCCGGCTGCAGGTTGACGATGAACGTGAGCCTGGACGGTTCTTTCGAGATGAGTCAGGAAACCGGGGCGGCTAATCGTTCGGGGTCCGCGGAACGCAGAGACAAGGACGCGAACGAGGGCGTCGAGAGGACGACGACTTGGGCCAGGAAGTTGGAGTACGAGGACGAGTTCGTCAACGAGGACTCCTGTTGTTCGTTGTCCCGCGAGTCACCCGAGAGGGACCTCGGCAAGTGCAAGGAGCCGAAGCAGTGCGAGGAGCCTGTCGAGGCATGCAACGAGGCATCGAGCATCGTCGTCGCCGGCAATTCCGCCCAGCAAGCGGTCCAGAAAACCAAAATTCCGATCCTGTGGAACATGTCGGTCCGACTGGATCGCATGGACATGACGATGTTCGAGCGGAAGGACAAGAAACGTCCGTGCGTCACCCCGAAGAAGAAGCAGCAGAAGAAGAGCGCCGCGTGCGAGGCTGGCGCCAGCGACACGCAGGAGACGCGTTTCGTCCAGAGGTGCGTTTACGAGACGAGGAACAGCGAGAAGACTGACTCGGAGGACCGTACGGAGGGCAGCCAAGTGGACTCCTCTCTGTCGTCCAGGCCGGAAACGCCGAACGCCAAACCGCAATCGCCTTCCGTGCACAATCTGAAGGAATGCAAAGTGATCCTGCAGAGGGTAACGTCGCCGAAGATGGTAAGGACGCCAGTGCAGACGGTGCAAACGGTGCAGAAGTCGAAGAAGGAGGAAATCGCGCCCAGAGCGGTCATAGAGAAACTTGGGGTGGACGAGGAAGTTGTGTTCCCCTCGCCGTTGCCCTCCGCGGACAGCCTGCAGCCGCTGGTGAACAACGTCGATTCGTCCGAGGCGACACCCAGCTCGCCAGAGACGCTGGAACCAGCCGTGGACGCTCCAGAGGCGATCGACACGGAAACGGAAACCGAGACCGGCTCGGACAGCTCCGAAATGTCGTCCATGACGAACGTACGGCTACGCGGATGCGAGGACGACGCCGTTTCCGACCAAATATCGTGCCCGGAAAGCGAGTCCATGTGTTGCGTCGACATCAATCCGGAGATCGTGTCCAGATTGGAGCCGGAAAGACCGGAAGCGTTCACGGAGGATTCCGCGGAGAGCCTGGCGCTAGCCACCGGTGCTCGCGACGAAGTTAGGTCGGACGGAAGCGATTCTGGCCTGGGCAGCGAGATCCCGAGCGACACAGGACCCGCACCGGTACCGGAAAGCGATTCCGAGACTTCTTTTTTGGACAGGATACCGGATGATATTCTTTCCGACAAGGAAAAAACCGTGAATCAATTGGACACCTTTGTGCCGAACGTGGGTGTACCCGGTACACCGCAGGCGCCATTGACGAACTTCCCGAGTCCTCCGAAGAGCAATCTGAAACGAAGATTGACGGACTGCATGGAGGAGGCCCCGAGCCCAAAGAGAAGCAACACGGATGAGATCATGAAAAAGAAACGCAACATCCACTTCGACGCCGTGACCGTCTACTACTTCCCTAGGGCACAGGGTTTCACTTGTGTGCCTTCGCAGGGTGGCAGCACTCTTGGTATGAGCGCGACACACACTCACGCCGAACGGTTCTCGTTATCGGAGCACGCGGCCGAACAGAGGCGGATTCATCGCGCTAGACTAGCTCAATTGCGCTCCGAGCGTGCTGCAAATTGCGTAGCGGAAGCTGCCTCCAGCTCGGAGGATCCCAGCGACGATACGGACGAGGAGCAGAGCGATAACGAGGAGCTGGACATCGATAGTTATTACTTCCTGCAGCCGGTGCCTACGTGGCAAAGGCGAGCGTTGCTCAGAGCGGCTGGTGTGCGTAGAATAGACGCGATCGAGAAGGACGAGTGCCGTGACATCAGAGCCAGCAGAGAGCACTGCGGTTGCGGGTGTAAGGGATACTGCGATCCGGAGAGCTGTCCTTGTAGTCGAGCGAATGTTAAGTGCCAGGTCGATCGAGCGGGTTTCCCTTGCGGATGCACCCGGGATGGCTGCGCGAACAGTTCAGGCAGGATCGAGTTCAATCCGGTACGCGTGCGGACGCATTTCATTCACACGCTGATGCGATTAGAATTGGAGAAGAAGCAGCGGGAGGAAGAGGAGGGCGCGGATCACGAGGGCAACGACAATCAAAACGGTAGAAGCCCGTTGAGGGAGATCAATTTGGGTTCCGTGATCGAGAACCGAAGTCCGGAATCGTGTCTGAACGGCGGCGGTTTCACGACGCTGCACTATGAGAATCACGACGCCAGGGACGGCGGGACGAATTGTCAGCCGGAGGTGCCCGGTACGAGAGAGGACAGTCTGGATCTTTACGCGATCCGCGACGACTGTTACCCCAGCGAAGACACTGTCGATGGTACGCAGGGGCCTCAAAGAAAGCTTCACCCTGAGTTTAGTCAAGCTTTTCAAACGTTCTCAGGCCAAACGGGTGCCGGTGTAAACTTTCAACAGCCTACTTATCAGGATTATCAGCCTTACGCTAACCTTCCTTCTACGTCTAGGGTGCAATTTCAGCCGCAATTCCAAACGGTGCCAGGAAATCCAGGGTTCTCACACTACGCGCCTTACGGACAAGACAATGGATCAATACAGGGGAACTGCCAGGTCCATTCAGGACAACACTCTTCCAGCTACGAGGCTAGCTTCGCCCAAGACGAGGCAACTGGATCGCAATACACGAATCTGAATTCGGTGCAGCCGATGAACACTGTCGTTCAGCAGATGGGCCAATTGGAACCGTTCTCGGAACTTTTGTCCGGCAGATATTCGTATTACGGCGAAATGGAGCCACAGGCGCACAGTACTTATCACGGGAACGCAGCTAAGGTCGATATTGACAAGAGCCAAGGTAACGAGCAGCAGTCGGAAAGTACGGAAGAGTGCGACGAGAATTTCGGAGAAATCATTAAAAAGTCAATGGTCGAGACTGTATCTGCTTAG
- Protein Sequence
- MELPSARDHLVEAQGSSTSIESTGTVTASTASSPTRTTSGIASAKLDKDADLASSPKKETRDGGVESREASLASLEGPSDSSPDEVQADSSEMGLKLGRTTKQNENTETEEEEEKKKKNAAAAVAAETRSDELVEQDEQRSSEATSTPVQCVERQTEDLKVIVGGGFVASSPICRKRPASDFLPIDAEIKRIGVETPENETNQVRRISPVLVSLRERTLGEISLSSSSCLFDDNANDRRVTRSNRTPDDSSSGCRLTMNVSLDGSFEMSQETGAANRSGSAERRDKDANEGVERTTTWARKLEYEDEFVNEDSCCSLSRESPERDLGKCKEPKQCEEPVEACNEASSIVVAGNSAQQAVQKTKIPILWNMSVRLDRMDMTMFERKDKKRPCVTPKKKQQKKSAACEAGASDTQETRFVQRCVYETRNSEKTDSEDRTEGSQVDSSLSSRPETPNAKPQSPSVHNLKECKVILQRVTSPKMVRTPVQTVQTVQKSKKEEIAPRAVIEKLGVDEEVVFPSPLPSADSLQPLVNNVDSSEATPSSPETLEPAVDAPEAIDTETETETGSDSSEMSSMTNVRLRGCEDDAVSDQISCPESESMCCVDINPEIVSRLEPERPEAFTEDSAESLALATGARDEVRSDGSDSGLGSEIPSDTGPAPVPESDSETSFLDRIPDDILSDKEKTVNQLDTFVPNVGVPGTPQAPLTNFPSPPKSNLKRRLTDCMEEAPSPKRSNTDEIMKKKRNIHFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERAANCVAEAASSSEDPSDDTDEEQSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAIEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEEGADHEGNDNQNGRSPLREINLGSVIENRSPESCLNGGGFTTLHYENHDARDGGTNCQPEVPGTREDSLDLYAIRDDCYPSEDTVDGTQGPQRKLHPEFSQAFQTFSGQTGAGVNFQQPTYQDYQPYANLPSTSRVQFQPQFQTVPGNPGFSHYAPYGQDNGSIQGNCQVHSGQHSSSYEASFAQDEATGSQYTNLNSVQPMNTVVQQMGQLEPFSELLSGRYSYYGEMEPQAHSTYHGNAAKVDIDKSQGNEQQSESTEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -