Xvio007026.1
Basic Information
- Insect
- Xylocopa violacea
- Gene Symbol
- Trerf1
- Assembly
- GCA_963969225.1
- Location
- CAXAJV010000011.1:24098288-24122498[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7 3.6e+03 -1.7 0.1 29 42 673 686 671 688 0.87 2 2 9.8e-12 9.4e-09 35.4 0.0 2 46 839 883 838 883 0.96
Sequence Information
- Coding Sequence
- ATGAGACTCCACGGTGGTTACTTCAAGAAGGATGCTGAGAACAAGAAAAGCGAGAAAAAAGAGGTCGTCGGTCCGCCTTTACAAACTGCGTCCGTGAGCGTGAGGGCACTTATCGAGGAGAagattatacagaaaagaacaaCTGCAGCAGACTCGAGCACGAACCAACAGCCTCGCACGAACGCGACTGTTTTCACAACACAAGCCGACAGCGCGTCGCAGATTTCCGGGAAGACGAGCTTCGCGGTACCAGCGCCGCCGCCATTGGCCTCCGCAGAGAAGGTCCGCAGACTCTCCGATGGCGAACACTTCCGGCAACCCAACATCACCGTTTCCGGGCACGCGACCGTGCAGAAACAGCTGCAAGAAGCGCAGACCCAGGCTCAGGCGCAGGCGTTGGCCGACATGATTCTAAAGGGCACCACCAAAATGGCTGTGAAGAGGACGACCTCCGATCCGGGGCAACGATTGCACCTGACGTATCAGACATCGGTCCAACCAACGACCAatcaacaacagcagcagcagcagcaacagcagcagcagcaacaacaacaacaacaacagcagcagcaacaacaacaacagcagcagcagcaacagcagcaacagcagcagcaacagcagcagcaaaaTAATCAGCCTCAAGCTCAGCCTAGTGTTACGGACAGTTTCTCAATGACAGGTTACTCTGAAGATGGCGGTTACTTTAGTCCCAGCCTTCAAGATGAAGTGTTCCAACAGGTCACTGCAGTTCCTGACAGCGTTCTGCTTCATGCTACCCAACTGGATTCTCTTCAGTTTCAGACAGCAAGCCTGCTGCAAGAACAGCCAACAGAGCAGCTGCAAGACATCACCCTGGAGGACCGATACCCCTCTCAGCACACAGTGAACCCAGACCTGCAGGCACTGGTGAACTCGCCATTGCCCGACTCGTTGGCGGAATTCAGCACCTACGGTGCTCAGTACACGGAGAGTCCTCACACGTTGCCCACCCAGTCTCCGCTGCCGTCGCCTCTGACCAGACACGACAGTCCAAGTTTCACATATCCAACGCCGCCAGCGAGTCAGGAGGGTCTCCTGACCGGGAGCTTCCCCCTGCTGAGTCCGCAGGAGGACCCGGAAAGCGTGAGGCAAGTGTCGTCGCCTCTGTCGGCGGCCTTCTACGCGACCACCATGTCCTCCGCGGCGGCGGTCGAAGAAGCTCTGAGCGAGGTATTGCCAGGCGAATCCGAAGCAGACGCGGACCTTTACGGTTCCGGCTCACCCAATCCGCACTCGCCACTGCCAAGCCCACTGTCCGCGACGCCAGCGCCATCCCCGTTGTCCTCTTTGCCGCCATCGTCGGTCTCGTCCCCGGGACCAGTGTCCTTCACCGGTACCAGCTTCCCAGTGTCGCCTCATCACGCTCTGCAGAACCAGATGATGCCAAACTCGGAGGACCCGCTGCTGTCGTCGACCCCGAAGGACTTCACCACGGCCAGCCGCAGGCGATTCGAGATACAGTCGTACAAGTTCATCACCAGCCAGAACTTGGTGGACTTTGGGCTGGGCAACGGCAGCTTGGCGGGCATCGTGGTGGACAACAACGGAGAGTTCAAGCTGATCCAGACGGCGGGACTGCAGAAGACGAACGTGCTGGTGCAGACCGGCTCCCTGAGCCCGGCGCTGACCTTCAAGAAGGAGGTGCGACTGGCGACACCGAAGATGGAGCCCGTCACCGTGAACCTAGGCCTGAACGTGCAGACCAACCACCAGTACAACGCTGGCCAGTTCAATCAGCAGCAGGTGGTGAACCCGACGAAGTTTCTCATACAGACGAACGTCGCCAAGAACAACAATCTGAGACAAAAGACGCCCTGCGGGAACTTGCCCGTTCCCGTCGAGCAGATCAAGGAAGAGCTTATGGACGAGGACGTGTTCCTGAACCCCAGCAACGTGCCAACGGGCAGCCCTGTCAGACAGTGCAGGAAGAGGCCACGGATGGACGGAGGATTGTACGCGACCGCGTCCCACTCGTACCCGTCGAGGTTGAGGAAAGCCTGCGATCGACACTGGGACAGCAGCTACACGCCACCCCCGATTTTGGATCCCTCGCGTCCTGGACCAGGCCTGTACGCCAGGCTGCACCAATACGAGAGGGACTCCGACTTCAGTTCGGACGACTCGCAAGGGAACGACGGTCCTCCGCCCAGAATCAACATCGGGACGAGGTACCAGGCCACGATACCGCCCATTGGCAGTGACGGAGACAGAGGGAAGGGCGAACCCGAGGCTGATCATCTGCTCTGGGATCCTGGTATAAATAACATGCTGACGAACAATGAATTGGAAATGTATCTGCAATTTGCATGCTGCGCCGCGGTACCAGGTGGAGGAAGAAACAAAGAGTACGCGCTTCATCTGCTGCACATGTGCAAAGGGAATATTCATGAAGCGATGCTGAAGCTGATGAGACCAACGCCTCCGCTACCAGCGGAACATCCGTTGCTCAGTTACGAGTGCCACGAGTCTGACCGCTGGACGTCGCAGGAAATGGACGCGTTCTATCAGGGCCTGTTGAAGTACAACAAGGACTTCTCTGCGATCTCGCGAGACGTGGGTGGCAAGTCCGCGAAACAGTGCGTGCAATTCTATTACCTGTGGAAGAGGCTCTGCCCGGACGAATACAAGAGACTGCGTGTCCGCCACGGTAAACCAAAGATCAAGGCGGAGAGCAAGGATTGCAAGGACACCAGGGAGCTGCGCGACGCCATCGCGTCGGTCACGGAGATGGACTTCAGTGACGACAAATCGATCCTCCATCGTACTCTGTTACAGACAAACGAGAGAGAAAACTCGGCTACTCTGACCACCAGCGACGGAGAGCTGAGATTATTCGCATACGACTGCCCCGATAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGGAGCACCCAAACCGCCCAAACCGGCAATACCGGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGTGCCCACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGCGCGCACATGAAATCCCACAGGCCGGTGCCCTCGCCCGATTCAACGGGTCAGGAATCTAAGAGGCCTGTCCAGCAGCAATCGAAGGTGCAACAATCCCAACAACCCACCCAGCAACAGCGTCAACAACAACAAcatcagcagcagcagcagcagcagcagcagcaacagcagcagcagcagccgcagcagcagcagcagcagcaacaacaacagcagcaacaaTTGAGCAACGTTTCATCGCAGGCCCAAGACTACAATCAGCAGCAACTGCCTCCAAGCAACGGCGACACCGGCGCGCAGAATCCAGCGCATTTATGGCACAACCCGACGCGGCTCAGGCCACCATAG
- Protein Sequence
- MRLHGGYFKKDAENKKSEKKEVVGPPLQTASVSVRALIEEKIIQKRTTAADSSTNQQPRTNATVFTTQADSASQISGKTSFAVPAPPPLASAEKVRRLSDGEHFRQPNITVSGHATVQKQLQEAQTQAQAQALADMILKGTTKMAVKRTTSDPGQRLHLTYQTSVQPTTNQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQNNQPQAQPSVTDSFSMTGYSEDGGYFSPSLQDEVFQQVTAVPDSVLLHATQLDSLQFQTASLLQEQPTEQLQDITLEDRYPSQHTVNPDLQALVNSPLPDSLAEFSTYGAQYTESPHTLPTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSFPLLSPQEDPESVRQVSSPLSAAFYATTMSSAAAVEEALSEVLPGESEADADLYGSGSPNPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPVSFTGTSFPVSPHHALQNQMMPNSEDPLLSSTPKDFTTASRRRFEIQSYKFITSQNLVDFGLGNGSLAGIVVDNNGEFKLIQTAGLQKTNVLVQTGSLSPALTFKKEVRLATPKMEPVTVNLGLNVQTNHQYNAGQFNQQQVVNPTKFLIQTNVAKNNNLRQKTPCGNLPVPVEQIKEELMDEDVFLNPSNVPTGSPVRQCRKRPRMDGGLYATASHSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQYERDSDFSSDDSQGNDGPPPRINIGTRYQATIPPIGSDGDRGKGEPEADHLLWDPGINNMLTNNELEMYLQFACCAAVPGGGRNKEYALHLLHMCKGNIHEAMLKLMRPTPPLPAEHPLLSYECHESDRWTSQEMDAFYQGLLKYNKDFSAISRDVGGKSAKQCVQFYYLWKRLCPDEYKRLRVRHGKPKIKAESKDCKDTRELRDAIASVTEMDFSDDKSILHRTLLQTNERENSATLTTSDGELRLFAYDCPDSFSGSVTVTMAGSTQTAQTGNTGHATVNTNSQTHTSSEQQLPVPTPLHYPCKICGKVFNKVKSRSAHMKSHRPVPSPDSTGQESKRPVQQQSKVQQSQQPTQQQRQQQQHQQQQQQQQQQQQQQQPQQQQQQQQQQQQQLSNVSSQAQDYNQQQLPPSNGDTGAQNPAHLWHNPTRLRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01068231;
- 90% Identity
- iTF_00142129;
- 80% Identity
- -