Xvio007881.1
Basic Information
- Insect
- Xylocopa violacea
- Gene Symbol
- grh
- Assembly
- GCA_963969225.1
- Location
- CAXAJV010000012.1:11455989-11474932[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-62 1.7e-58 197.7 0.0 27 221 336 532 321 534 0.91
Sequence Information
- Coding Sequence
- ATGGGCCAGAAGCTGCTGGTGCAGGAGGCGCCTGGCTCCGGTTCCGGTTCGACGAATCGCATGGAAGGCGGTGAAGGCGCCGGGGGAGGGGAGCTGCACCACTTCCTCCATCAGTACAACCAGCAGTCCCACAGTCCGGGGCAGAGCCTGCAGGGTGGCCTTCCGCTTCCGCTTAGCCCGCAGTCCCTCAGACACGACGGCTCCTCGAGCGTCGGCATCGCCGGCGTCAAAAGGGAGCCAGAGGACCTGAGCTCGTCGCGAGGGGCGCAACAGTCCAGCAAGAGGCACAAACAGGAGCAACCGGAGAGTCCCACGCCACCGGGGATGTACCATCATCATCAGCATCAACTACAGGTACAACAATACGGCAGCCCCTACGACCCCTACAACTCGTGCAGCCCCCGGCTACAGTCCACGGCGTACACGTCGACCTCGGCGACGGGCGCGGCGAACGCTGGGAACCCGAGCGGACTTCACCAGGAGGCGACCGCTGTCTACGTGACTGGCGACGCGCTGCCACCGTTGGCCTCCTCGAGCTCCTCGTCGTTGTCCACCACGACCGCTTCGTACACGAGGTACGAGGTTGTGCCAAGCTCTTACGCGACGACACACGCGATACGCTCGTCCTCGAGCAGCAGCAAAGTCCTGACCGTTGATCTTCCCAGCCCCGACTCCGGGATCGGCGCGGACGCGGTCACGCCCAGGCAAGACCACCACCCACCCACGGCGCTCCATCAGTCCTCTTTCGACTACACGGAATTGTGTCCTGGTGGAACGGCAGCAGGAGCCGCAGTGGTCCTCGAGAGCGGGGCAGTGATACACCATCAGCCGCTGCAATTACAGCTGCAACAAAGCCACGCGCAAGCACAGGTGCAAcgcggaactttggtctcctccGCGGCGACCAACCCGAATCCCAACCCGAATCCACCGAGGTCGAGACCTTGGCACGATTTCGGCAGACAAAACGACGCGGACAAAATCCAGATACCAAAAATATTCTCCGCCTATGGGTTCAAATACCACCTGGAGTCGCCAATTAGCACGTCGCAGCGTCGCGAAGACGACAGAATCACGTACATCAACAAGGGGCAATTCTACGGTATCACGTTGGATTATGTCCCTGATCCCGACAAACCGACCCTGAAGGCTGGACAGACCGTTAAGAGCGTGGTAATGTTGATGTTCCGAGAAGAGAAGAGCCCAGAAGACGAGATTAAGGCGTGGCAGTTCTGGCACGGAAGGCAGCACTCTGTCAAGCAACGTATTCTCGATGCTGACACGAAGAACAGCGTGGGACTGGTGGGCTGTATAGAGGAAGTCGCACACAATGCGATCGCCGTTTATTGGAACCCACTCGAATCCTCGGCGAAGATCAACGTGGCGGTGCAATGTCTCAGCACGGACTTCTCCAGTCAAAAAGGCGTGAAAGGATTGCCTTTGCACATTCAAGTGGACACGTACGAGGAGCCGCCACCGCATACCCACACGTACACGTCACCCTCGCATCGTGGCTACTGCCAGATCAAAGTGTTCTGCGATAAGGGAGCTGAAAGGAAGACTCGCGACGAAGAGAGGAGAGCGGCGAAGAGGAAGATGACGGCCACAGGTAGGAAAAAGCTCGACGAGCTCTACCATTCCGTCACGGAACGCAGCGAATTCTACTCCATGGTCGATCTTCATAAACCACCCGTCCTCTTCTCGCCACCGGCGGAGCACACCATAGACAAGTTCTCGACGATGGAGTTGTCGGGCTTCTACGGAGGTGGCGGCGGGGGCGGTGGCGATACAGACACATCGTCCCTGAGTAATGGCGAGGGCGGAGGATTGAAGGCAGGGGGCAGCAGCCCTTATCCTGCCTGCGGCAGACCCAGCTTGCCCGCCCTCAAGTTCCACAACCACTTTCCGCCCGACAATCTGACTAGCCTGCACGACAAGAAGGACTCGTTGCTGATGCAGGTGCAGGAGCTGCAGGGCTCGGTGCTGCAAGGGGTGCAGCAGGCAGGCCTAGCCGGCACGGTCGTTTCCGGGGTCGGCAATCGGCTCCATCTTCAACAGCAGCCCCCGCACCTTCGTCCAGCCGACGCGGAGGAAAGAGTGATGCTGTACGTCCGCCAGGAGTCCGAGGACGTCTACACGCCGCTGCACGTCACGCCGCCAACAGTTCAAGGATTGTTGAACGCTATTGAGTCAAAGTACAAAATTGCATCCTCGAGTATTAATAACCTCTATCGCAAAAACACAAAGGGAATTACAGCGAAAATTGACGACGACATGATCCGATATTACGTGGACGAGGACCTGTTCCTCCTGGAGGTGACCCACTCCAGAGTAAACCCTGACCCAAGCAACGAGCGCAACCCGACCAATCCAGGTTCACCAGGCGACCCAGGCGATCCTGGGGACCCGCCAGCGCCTACTGGCTACGACGTCACCCTGATCGAActaccctcgtcgcctgctcacATAGCTCACTCGCCATTAACGAACTCCGCGCACGGGCACCCGCACGTTCACGAGAGTGGCAACACGTGA
- Protein Sequence
- MGQKLLVQEAPGSGSGSTNRMEGGEGAGGGELHHFLHQYNQQSHSPGQSLQGGLPLPLSPQSLRHDGSSSVGIAGVKREPEDLSSSRGAQQSSKRHKQEQPESPTPPGMYHHHQHQLQVQQYGSPYDPYNSCSPRLQSTAYTSTSATGAANAGNPSGLHQEATAVYVTGDALPPLASSSSSSLSTTTASYTRYEVVPSSYATTHAIRSSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHPPTALHQSSFDYTELCPGGTAAGAAVVLESGAVIHHQPLQLQLQQSHAQAQVQRGTLVSSAATNPNPNPNPPRSRPWHDFGRQNDADKIQIPKIFSAYGFKYHLESPISTSQRREDDRITYINKGQFYGITLDYVPDPDKPTLKAGQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHIQVDTYEEPPPHTHTYTSPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHSVTERSEFYSMVDLHKPPVLFSPPAEHTIDKFSTMELSGFYGGGGGGGGDTDTSSLSNGEGGGLKAGGSSPYPACGRPSLPALKFHNHFPPDNLTSLHDKKDSLLMQVQELQGSVLQGVQQAGLAGTVVSGVGNRLHLQQQPPHLRPADAEERVMLYVRQESEDVYTPLHVTPPTVQGLLNAIESKYKIASSSINNLYRKNTKGITAKIDDDMIRYYVDEDLFLLEVTHSRVNPDPSNERNPTNPGSPGDPGDPGDPPAPTGYDVTLIELPSSPAHIAHSPLTNSAHGHPHVHESGNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01089761;
- 90% Identity
- iTF_00962958;
- 80% Identity
- -