Xare008951.1
Basic Information
- Insect
- Xylocampa areola
- Gene Symbol
- stc_1
- Assembly
- GCA_935412865.1
- Location
- CAKXYQ010000279.1:131753-147129[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 9.7e-08 0.0006 20.2 11.3 1 18 236 253 236 254 0.99 2 10 0.0011 6.7 7.3 14.5 1 19 295 313 295 313 0.98 3 10 2.4e-05 0.15 12.6 12.7 1 19 354 376 354 376 0.87 4 10 4 2.5e+04 -4.8 2.2 6 10 406 410 406 410 0.94 5 10 0.0046 28 5.3 7.4 1 11 416 426 416 427 0.95 6 10 0.059 3.7e+02 1.7 0.3 4 10 431 437 430 438 0.93 7 10 1.5e-05 0.093 13.2 14.5 3 19 445 461 443 461 0.92 8 10 0.00054 3.3 8.3 9.6 10 18 508 516 505 517 0.92 9 10 5.1e-09 3.2e-05 24.3 10.1 1 16 553 568 553 573 0.89 10 10 0.0016 9.6 6.8 6.7 1 14 583 595 583 611 0.92
Sequence Information
- Coding Sequence
- ATGACACTAGTACCAGCGCGGAGCCGCCGGCGCGCACACGTGCGGCCGAGCGTGCCGCCGCGCGCGCGCCTGCCCGCACCCCTGCACGCTGCTGTGCCACCCCGGGCCCTGCCCGCCCTGCCAGGCCACTGTCGTCAAGTACGTATGACACTAGTACCAGCGCGGAGCCGCCGGCGCGCACACGTGCGGCCGAGCGTGCCGCCGCGCGCGCGCCTGCCCGCACCCCTGCACGCTGCTGTGCCACCCCGGGCCCTGCCCGCCCTGCCAGGCCACTGTCGTCAAGTACGTATGACACTAGTACCAGCGCGGAGCCGCCGGCGCGCACACGTGCGGCCGAGCGTGCCGCCGCGCGCGCGCCTGCCCGCACCCCTGCACGCTGCTGTGCCACCCCGGGCCCTGCCCGCCCTGCCAGGCCACTGTCGTCAAGTACGTATGACACTAGTACCAGCGCGGAGCCGCCGGCGCGCACACGTGCGGCCGAGCGTGCCGCCGCGCGCGCGCCTGCCCGCACCCCTGCACGCTGCTGTGCCACCCCGGGCCCTGCCCGCCCTGCCAGGCCACTGTCGTCAAGTACGTATGACACTAGTACCAGCGCGGAGCCCATATGTGATTAGGCAATGCGGTTGCGGTGCGGAAACTCGCTCAGTGCTCTGCAGCAGCAAGTTGCCGCAAGTCTGTGGACGTGTGTGTGGAAGAACTTTGGAGTGCGGCGTGCATAATTGTGCTAAGGACTGTCACGAAGGGCCCTGCGATACCTGCATCGAGACTGTTGAACAAGTCTGCTACTGTCCCGCTGCTAAGTCCCGTTCGGTCCCGTGCACGCGGGAGACGGGCACGTGCAGCTCGTGGGCGTGCGGGGACACGTGCGGGCGCGTGCTGGCGTGCGGCGCGCACGTGTGTCGTGCTGGGTGCCACGCGCCGCCGTGCCAGCCGTGCCAGCTGTTGCCCGTACATGTGCGGACCTGCCCTTGTGGGAATACGCAGTTGGCCAAAGAGTCACGCAAGTCGTGTACGGACCCGATCCCGTTGTGCGGTAACATCTGCGCCAAGCCGTTGCAGTGCGGCCCAGCCGGCGACAAACACTTCTGCAAACTCAACTGCCATGAAGGTCCCTGCCCCGAATGTCCCGATAAAACAGTTTTGCAATGCCGCTGCGGACATTCGAGTCGCGAAGTACCCTGTGCCGATTTACCGCAGATGTACAATAATGTGCTGTGCCAAAAGAAGTGTAATAAGAAACTGTCATGTGGTCGGCACCGCTGCCGTACAGTATGCTGCGCGGCCACGTCTCACCGCTGCGCCGTGGTGTGCGGCCGCACGCTGTCGTGCCAGACGCACCGCTGCGAGGACTTCTGCCATACCGGACACTGCGCACCCTGCCCGCGCGTCAGTTTTGACGAGCTGACCTGCGAATGTGGTGCGGAAGTAATTCTTCCTCCAGTACGCTGTGGTACCCGCCCTCCGGCTTGCGGCGCGCCGTGCATCAGAGAGCGGCCCTGCAAACATCCGCCGCATCACTCCTGCCACTCCGGAGACTGTCCACCGTGCGTGGTGCTGACTACCAAGCGATGCCATGGCAACCATGAGGAACGAAAAACCATACCGTGTTCGCAAGATGAGTTCTCGTGCGGTCTTCCATGCGGCAAACCGTTACCTTGCGGTAAACATACCTGTATCAAGACCTGCCATAAAGGACCCTGCGATACTGGCAAATGCACCCAAGCATGCATGGAGAAGCGTCCGAGCTGCGGCCACCCTTGTGCTGCGGCGTGCCACGTGGGGGCAGCCCCCGACACGCCGGGCGCGTCCTGCCCCAGCAGCGCGCCGTGCCGCCGCCCCGTGCGCGCCACGTGCCCGTGCGGCAGGCGCCACGCCGACCGGCCCTGCTGCGACAACGCGCGGGACTATGCCAAGATGATAAGCGCTCTAGCAGCCACCAAGATGTCAGAAGGTGGTTCAGTAGATCTGTCAGACGTGCAGAGACCGGGAAATATGCTCAAAACTCTGGAATGCGATGACGAGTGTCGCGTAGAAGCTCGCACTCGTCAGCTGGCGCTGGCGCTTCAGATCCGCAACCCCGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCTACTGCTGCACGCGAACCTGCCTTCGCGCAGCAGATACACGACAAGCTCACGGAACTAGTGCAACTCGCTAAAAAGTCCAAACAAAAGACCCGAGCGCACTCGTTCCCGTCAATGAACTGGCAGAAGCGTCAGTTCATACACGAGCTGTGCGAACACTTTGGCTGTGAGAGCGTCGCCTACGATGCCGAACCGAACAGGAATGTTGTTGCCACCGCTGACAAGGAAAAGTCGTGGTTGCCAGCAATGAGCGTGCTAGAAGTGCTAGCACGCGAGGCGGGCAAGCGGCGCGTGCCCGGGCCCGTGCTGCGCGCGCCGCCCGGGGCTGCGGCCGCCACCACCGCGGCGCATCTGCCGCTACACAAAGCAACAAGTGGCTGGGCGACTTTAACGTCAACGAACGCATGGGCCGCCCGCAGCCAACCGAAGCCGCAACAACCGGCCGCAGAGAAGATCGACTACTTCGACAACCCGCCCGACAACTAG
- Protein Sequence
- MTLVPARSRRRAHVRPSVPPRARLPAPLHAAVPPRALPALPGHCRQVRMTLVPARSRRRAHVRPSVPPRARLPAPLHAAVPPRALPALPGHCRQVRMTLVPARSRRRAHVRPSVPPRARLPAPLHAAVPPRALPALPGHCRQVRMTLVPARSRRRAHVRPSVPPRARLPAPLHAAVPPRALPALPGHCRQVRMTLVPARSPYVIRQCGCGAETRSVLCSSKLPQVCGRVCGRTLECGVHNCAKDCHEGPCDTCIETVEQVCYCPAAKSRSVPCTRETGTCSSWACGDTCGRVLACGAHVCRAGCHAPPCQPCQLLPVHVRTCPCGNTQLAKESRKSCTDPIPLCGNICAKPLQCGPAGDKHFCKLNCHEGPCPECPDKTVLQCRCGHSSREVPCADLPQMYNNVLCQKKCNKKLSCGRHRCRTVCCAATSHRCAVVCGRTLSCQTHRCEDFCHTGHCAPCPRVSFDELTCECGAEVILPPVRCGTRPPACGAPCIRERPCKHPPHHSCHSGDCPPCVVLTTKRCHGNHEERKTIPCSQDEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQACMEKRPSCGHPCAAACHVGAAPDTPGASCPSSAPCRRPVRATCPCGRRHADRPCCDNARDYAKMISALAATKMSEGGSVDLSDVQRPGNMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFAQQIHDKLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPGAAAATTAAHLPLHKATSGWATLTSTNAWAARSQPKPQQPAAEKIDYFDNPPDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -