Basic Information

Insect: Xylocampa areola
Gene Symbol: -
Assembly: GCA_935412865.1
Location: CAKXYQ010000826.1:665456-675585[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.4 1.1e+02 4.0 0.4 1 23 225 247 225 247 0.87

2 14 6.5 5.1e+02 1.9 0.3 3 13 283 293 282 297 0.87

3 14 1.6 1.3e+02 3.8 0.2 5 20 308 323 305 325 0.92

4 14 0.52 40 5.4 0.3 3 23 338 359 337 359 0.94

5 14 0.062 4.8 8.3 0.2 2 20 397 415 396 417 0.93

6 14 4.5 3.5e+02 2.4 0.7 1 18 684 700 684 704 0.73

7 14 1.1 89 4.3 1.3 1 23 716 738 716 738 0.88

8 14 0.22 17 6.5 3.0 2 23 849 870 848 870 0.95

9 14 0.00045 0.035 15.0 0.9 2 23 886 907 885 907 0.96

10 14 4.7e-07 3.6e-05 24.4 2.7 1 23 913 935 913 935 0.99

11 14 0.00099 0.077 13.9 0.3 1 23 940 962 940 962 0.96

12 14 2.9e-05 0.0022 18.8 3.0 2 23 969 991 968 991 0.96

13 14 6.9 5.4e+02 1.8 0.1 1 10 998 1007 998 1017 0.79

14 14 0.0011 0.088 13.7 0.5 3 23 1030 1051 1029 1051 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.4	1.1e+02	4.0	0.4	1	23	225	247	225	247	0.87
2	14	6.5	5.1e+02	1.9	0.3	3	13	283	293	282	297	0.87
3	14	1.6	1.3e+02	3.8	0.2	5	20	308	323	305	325	0.92
4	14	0.52	40	5.4	0.3	3	23	338	359	337	359	0.94
5	14	0.062	4.8	8.3	0.2	2	20	397	415	396	417	0.93
6	14	4.5	3.5e+02	2.4	0.7	1	18	684	700	684	704	0.73
7	14	1.1	89	4.3	1.3	1	23	716	738	716	738	0.88
8	14	0.22	17	6.5	3.0	2	23	849	870	848	870	0.95
9	14	0.00045	0.035	15.0	0.9	2	23	886	907	885	907	0.96
10	14	4.7e-07	3.6e-05	24.4	2.7	1	23	913	935	913	935	0.99
11	14	0.00099	0.077	13.9	0.3	1	23	940	962	940	962	0.96
12	14	2.9e-05	0.0022	18.8	3.0	2	23	969	991	968	991	0.96
13	14	6.9	5.4e+02	1.8	0.1	1	10	998	1007	998	1017	0.79
14	14	0.0011	0.088	13.7	0.5	3	23	1030	1051	1029	1051	0.97

Sequence Information

Coding Sequence: ATGTCTGATACATCTAGAAAAAGATCTAGAAAGTCGAAGTTGGTGCCTAGAGAGTGCTCCATAGAATCTGAAGACGATGTTGATATGCAGCTCCTACTAAGTAAAGTATCTAAACCCATGACACAGTTTATGAATATAGAAACACAAGTACAGGAGACAACAAGTTCATTGATAAAAGAAAATCCTCAATATAACATTTTGAAGAAAATTGCAGCTTCAGAAAAAAAGGATACAGAGCCAACATCTCCATTAAAATTTGTTATAAAAGTTGAAGTAGAACAATGTGATGATTATCAAATTAATGTTGAAGTAGACGAGAAATATTTCCCTGCAACTACACCAAGCGAAGATCCAAATAAACAATCTGCCAATATAGCCACAAGCTCTAAAAACACTTACAAAAGCAATACAAATTGCACATCAGAGGTTGAAAACCCAAAGTTGCTAACATTTTCTCTATCGGAAGACAAAATTCTTGAAGCAGCAGACCAAATAATGCAAAATTCAAATAATTATGCTGATAAAATGCTTGATATCTGTGTCAGAAACACTATAGGACATGAAATGAAAGGATCACAGTACATCGGTCTTCACGAGGAAAAGATTCAAGAAGCTCTGAATGAATGGAGGTTGTGGCAGCACCGTAGTTTCCTCAGAGAAAGTCCTTTATTCTACAAATGTTACATCTGTGAAAAGTCTTGGTGGTATTTATCAGAATTTAGAGAGCATATCGCCCAACACAGTGTGTTAAATATCAGCTTAGAAATGTACGAGAAACATGAAGTTAATGTAATAGCTTATGCTGAAACTGTGCCTGAAGTCAAGCAAATACATACTGACGGGTTATGTTACCGATGTGGAAAAGAGTTTGAAACACACAAACTCACTTCACGATCTTGTTTGAAATACTATGGAAATCTTGGTTGCTTTAAACAGTTTTTTACTTGCTCAAGTCTAATTTCTCATGTAGATAATTGTACGAACTGCATAACAACGGAGTGGAATGTTTTATGCGTTGTTTGTAAAACCAAATTTGAGTCTGAAGCTTTAATGTTTCAACACTTACTGCTGTCTCATACGGTGCGCTCCGATGTCCCTGTGAGCTCTCGTTACAGCATATGTAAGACATGCTTAGGTAGATATTTTTGTAGCTACCTTCATATCTGCGGTAGGCAGGGGCCACATATGTCATGTACACACTGTTTCAAAAGATATCCGAATAGGATTTCTGTTGAAATTCATATGGAGGGAGCTTCTGAATGTTATACTTGTGAAGTCTGTAACACTGTTTTACCGTGGAGTTGCATGAAATATCAACATATGATGGCTCATACAGACAAATATATGTTGGTGTGGAAATGTGTACAATGTGAGGACTATAAGGTGTATATTGACCCTGATGGTGCGTTACACCATAGGTTCCTTAGCCATAAAATGAACAGGGCATTACGACATCTGGGTTATTTTATTAAAATCATGATACCACGGTCTTGCATTTATCCATCGGAATCTACATGTAAAGTGACGGAGTTACTAGAGTCGCCAGTAACGCAGTCGATTTCCAGACCACTGCCAGAAGTTGAGCATGAACCCGCAGTAAATCAAGAACAACTATCAGTTACAGAAGGTCAAAATGAAAATGTTGCGATAAAGGAGGTGCCGCAGGACTTTGAGGACTACATATCAGCTTCACACATCACAATTAAGGAAGAATCAAATGATAACACATTAAATGAATTTATAATTGAGGAAAATCCAACAAACATTTATGTACCAGAAATAGATATTAAACAGGAATATGTTGATGAAGAATCTGATGTTTACGAAGATGACATTATTAAACTTAACATTGATATCAATGATCATTTCATGGTCAAACAAGAACCAGAATCAAATGAACTATTACAAGAATCTCATGACAGTCAAGAATCAATTAATTACACTTTTGAATCCGCTGATGAAGCTCAAGAATCGGGCCATCCAGTAATAATAAAACAAGAATCAATACTAGAACCAGAGGTAATTATAAATGGTAAAGAAAAAAAAGTGTATAGGTGTACCACATGCGGTTTTAAAGCCAATCATAGAGAATACAGAGAACATGTCGAGACAGATTGCATAAAATCTGGTGTTAATGTAAAAAATTTCGTGTGTACGAAATGTAGTGCGGAATTTTCAAATATGAAAAAGTATTTAGGTCACTTCACGTTACACGGGTATAAGGCTCTATCCTGTCCGGAGTGCTTAAAAGAATTCTTCTGTTATACTAACCTGATCCCCCATGTTCAAGCTCATATAAAACAAAATTTTGTGCGTGTGAAATCAATAACTATTGATGGTTCAAAGTCAAACCCGGAGTATCAGTGTAAAAAGTGCACTGATAAAGTTAATTTGTATGAATTCTTTGAACATTGGGAGCTGCATGTGAAGCGTACTCCACAGAGTGTAGTGCAAAATGTACCCGCTGAGGTACACCGGAAACCTGGAGATATTGATGAGGAAACTATTAAGGAGTTGCTCAACCGCATACAACAACAGCCTAAACAGTGCAACCTATGCCAGCGTCCATTCAAACGGATTAATGAGTGCAAACGACATCTCATCGAACATCTCCTCACCGATGCCTACTCCCACAAGTCAACCTTCAGTGAGTTACGATGCCAAATGTGTGGCACCGGGTTCTTCACTCCGGAGAGGTTTAAACAACATATGAGGGACCATGCCTCCCTACCAGTGTATAAATGTGAATTGTGTGACCGAACATTCAGTGATTCTAGTAACTTTACGAAGCATAAAAAAGTGCATAATCTTAAAGTGTTTGTCTGTGATTTGTGCGGCAAAAAGTTTCAAGCGAAATTGTCTTTGATGAAGCATATTGAGGACCACAAAACTACGGAGCCAATACAGTGCAAAATTTGCGATAGAACATTCTTTTTTCAAAACTCATTCCGCCGGCATATGCGATATAACCATGAAAAAGATTCCTTCGTTTATCGATGCGTCATTTGTTCTGAAAGATTTCTGTCTCTAAAACTCAAATGGATTCACATGTGGGAAGTTCACAAAGAGAGGAAACATAAAGCTGACTGCCCCATATGTTTTAAGTCGTTCAGAAAATATACAGATGTTAGAATTCATGCAAGAAAAGAGCATAATGCTGAAGTATCAGTGTTATGTGTTAAAAATACTAGCAACACCGTCAGTGATGTTGGGAATGTGTTGCAATTTAAAGATTTCAAAATAGGGGAGCCGGAGACTTTAGTCATTTATGAGTGA
Protein Sequence: MSDTSRKRSRKSKLVPRECSIESEDDVDMQLLLSKVSKPMTQFMNIETQVQETTSSLIKENPQYNILKKIAASEKKDTEPTSPLKFVIKVEVEQCDDYQINVEVDEKYFPATTPSEDPNKQSANIATSSKNTYKSNTNCTSEVENPKLLTFSLSEDKILEAADQIMQNSNNYADKMLDICVRNTIGHEMKGSQYIGLHEEKIQEALNEWRLWQHRSFLRESPLFYKCYICEKSWWYLSEFREHIAQHSVLNISLEMYEKHEVNVIAYAETVPEVKQIHTDGLCYRCGKEFETHKLTSRSCLKYYGNLGCFKQFFTCSSLISHVDNCTNCITTEWNVLCVVCKTKFESEALMFQHLLLSHTVRSDVPVSSRYSICKTCLGRYFCSYLHICGRQGPHMSCTHCFKRYPNRISVEIHMEGASECYTCEVCNTVLPWSCMKYQHMMAHTDKYMLVWKCVQCEDYKVYIDPDGALHHRFLSHKMNRALRHLGYFIKIMIPRSCIYPSESTCKVTELLESPVTQSISRPLPEVEHEPAVNQEQLSVTEGQNENVAIKEVPQDFEDYISASHITIKEESNDNTLNEFIIEENPTNIYVPEIDIKQEYVDEESDVYEDDIIKLNIDINDHFMVKQEPESNELLQESHDSQESINYTFESADEAQESGHPVIIKQESILEPEVIINGKEKKVYRCTTCGFKANHREYREHVETDCIKSGVNVKNFVCTKCSAEFSNMKKYLGHFTLHGYKALSCPECLKEFFCYTNLIPHVQAHIKQNFVRVKSITIDGSKSNPEYQCKKCTDKVNLYEFFEHWELHVKRTPQSVVQNVPAEVHRKPGDIDEETIKELLNRIQQQPKQCNLCQRPFKRINECKRHLIEHLLTDAYSHKSTFSELRCQMCGTGFFTPERFKQHMRDHASLPVYKCELCDRTFSDSSNFTKHKKVHNLKVFVCDLCGKKFQAKLSLMKHIEDHKTTEPIQCKICDRTFFFQNSFRRHMRYNHEKDSFVYRCVICSERFLSLKLKWIHMWEVHKERKHKADCPICFKSFRKYTDVRIHARKEHNAEVSVLCVKNTSNTVSDVGNVLQFKDFKIGEPETLVIYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -