Basic Information

Insect: Xylocampa areola
Gene Symbol: -
Assembly: GCA_935412865.1
Location: CAKXYQ010000136.1:336265-362615[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00057 0.044 14.7 3.1 1 23 17 39 17 39 0.97

2 12 0.013 1 10.4 4.5 1 23 45 68 45 68 0.98

3 12 0.014 1.1 10.3 9.8 1 23 74 96 74 96 0.98

4 12 9.7e-05 0.0075 17.1 2.4 1 23 102 124 102 124 0.96

5 12 0.004 0.31 12.0 3.8 1 23 130 152 130 152 0.98

6 12 5.7e-05 0.0044 17.8 0.4 1 23 159 182 159 182 0.93

7 12 1.6e-05 0.0012 19.6 2.9 1 23 190 213 190 213 0.96

8 12 0.012 0.97 10.5 0.3 2 23 220 240 219 240 0.97

9 12 0.81 63 4.8 2.2 1 13 246 260 246 262 0.92

10 12 0.034 2.7 9.1 7.7 1 23 755 777 755 777 0.96

11 12 7.4 5.7e+02 1.7 0.3 2 10 788 796 787 808 0.73

12 12 0.027 2.1 9.4 1.4 1 23 934 956 934 956 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00057	0.044	14.7	3.1	1	23	17	39	17	39	0.97
2	12	0.013	1	10.4	4.5	1	23	45	68	45	68	0.98
3	12	0.014	1.1	10.3	9.8	1	23	74	96	74	96	0.98
4	12	9.7e-05	0.0075	17.1	2.4	1	23	102	124	102	124	0.96
5	12	0.004	0.31	12.0	3.8	1	23	130	152	130	152	0.98
6	12	5.7e-05	0.0044	17.8	0.4	1	23	159	182	159	182	0.93
7	12	1.6e-05	0.0012	19.6	2.9	1	23	190	213	190	213	0.96
8	12	0.012	0.97	10.5	0.3	2	23	220	240	219	240	0.97
9	12	0.81	63	4.8	2.2	1	13	246	260	246	262	0.92
10	12	0.034	2.7	9.1	7.7	1	23	755	777	755	777	0.96
11	12	7.4	5.7e+02	1.7	0.3	2	10	788	796	787	808	0.73
12	12	0.027	2.1	9.4	1.4	1	23	934	956	934	956	0.98

Sequence Information

Coding Sequence: ATGAAAGGAAAACAGAGGAAGAAATTTACACCACCCAAAAAAACAATATACACGTGTCCACATTGTGATAAGCAATTCGCAGACAATTCCTCATGGAGTTGTCACATCCGTCTCCATTCAACGGAGTTGCCATTCAAATGTGAACTGTGTGACTATAAGTGTAAGATCAAGAAATATCTGTCGCGTCATGTGAAGAAGGCGCACACGAAGCCGGTGGGGCACCAGTGTGCGGTGTGCGGCAAGTGCTTCCACTTCTACTGCAAGCTGCGCGACCATATGAGAGTGCACACTGGTGAAAAGCCACACAAATGTAGTGTCTGCGACAAAGCGTTCAGTTCCACCTACTCTTTAAATGTGCACAAATTTATACATACTGGTGAAAAGCCGTTTCAATGTAGGTTCTGTGAGTATGCATGTAGAGACAATTCTACCATACGCAGGCACATGGAGAGACATATGGGGATCTCAAAGGACTACCCTTGCTCTATATGCAACAAGAATTTCAAGAAGAAGGAGACGCTCCAGCTTCACGTGGAGGAGGTACATTTAGAGTTGGACACACGCAAGCACGCGTGCGTCCACTGTAACAAGATGTTTAAGACTAAAGGAACACTCAACATACATATAAACACAGTCCACAAGACTGCGAATCGTGTAAAATGCGAAATTTGTGGTAGTCGCGTCACCAAGAACAATATACAAGCGCATATGAGACGCCATATTGATGTTAGACCATACAAATGTAGTTTTAAAACTTGTGGAAGGAGATTTAAAGATAAGGTAAGTTCTGATGTTATCCTACCATCACACTCCGCTAACCATTCCACTCTAGTGATGGCCATGCACCATGATAATGACATACTGAGAGCTCCACACTTACCTATCATGTCTTCTGGTTTCTTCAAAACGTGTCCAATGAAGAAGTCATCGAAGGCATCTTCTGTAGTATTCTCCCTCTCTATGAGACTTCTGGAGATATCTTCTGATAACACTTTCTTGGAGAAGGAACATGAAATAACAATTAAAGATGAGCCAGTTGAAGAAGTGGTGGCGACTGGTGGACCACCAGAGTTCATATACGAAGTGCAGGTCGAGAAACAGGAGGAAATGGACGTAGACACCATAGAGGTACCAATCATTCAGCCCCAAAGCCCTCAATCTTACCCCATAGACTCTGACACCATCACTTACTCCAAAAAAGTGTTATCAGAAGATATCTCCAGAAGTCTCATAGAGAGGGAGAATACTACAGAAGATGCCTTCGATGACTTCTTCATTGGACACGTTCTGAAGAAACCAGAAGATATGATAGATATGCCAAAAGACATAGTAGACGAGAAGAAGAAGGAACGAGTAGAGAAGTGCTTAGAAAAACTATTGGCTAAAGTGAGAATGCGGAAGCAGTGTAAGGTGCTTGAGAAATTGAGAAGACGGTATAACAGACGAATCAAGATGGCGACCAGCAGCGGTAATAAAAAAGAACCAAACTCAATAAGATATTTCAAAAAACCCGAAATGATTAATCAATCTGGTAAAACATTAAATAATACCAATGCTGATACTGAAATAAATAATGATAATGATAAGACAATGAATCACGAAGATATTGATGATGAAAAAGTAAAAAATAATAATAACAGTGGTGATCTAGAGGGTAATAATTATAACATAAATGAAGAACGTGGTGATGATAAAGAAATTACAGATCATAATGTTAACAAAGAAAATGATAAACCGATAAATGATGTTAAAACAAATGATCAAGTCTCTGATGACAATACTAACAAAACCAACGATGAAGCAATCAATGGTGACAATGCTAAAAAAACCAACGATGAAGCAATAAACGTTGATAATGCTAACAATACCAACGATGGAGCAATAAAGGATGATAATGCTAACAAAACCATAAGTGATGACAATGCTAACAAAACCAACGATGAAGCAATAAACGTTGATAATGCTAACAAAACCAACGATGGAGCAATAAACGTTGATAATGCTAACAAAACCAACGATGGAGCAATAAAGGATGATAATGCTAACAAAACCAACGATGGAGCAATAAAGGATGATAATGCTAACAAAACCAACGATGGAGCAATAAAGGATGATAATGCTAACAAAACCAACGATGATGAAGCAATAAATGATCAAGAAATTGATGACGATGATGCTAAAGACAGCGATTATAAAGATAGTGATTTTGAAAGCAATAGTGACGAAGAAATGAATAAGAATGGAAGACTCACGTTCAATACACATCAGTGTTATATCTGTTTTAAGCTCTTCAAAACGAAAAACGACTTGAAACGCCACTGCAGAATTCATTTCGACATATGCAACGACAAAATGCTTAAAAAATGCCCATTTTGTGGTTACGTGACCAACTTACAAATCAGTAGGCACATCAAATTGGTCCACAATATTATCTTAGACATCCCATACAGCCGTATTAAAGAAAGAGACACGCAAAACGGGTCCAAATACGTCTTCGAAATAGACAAGAACTGTGACCTAGAAATTATACCGAGTATTAGTAATTTAAATAAAATCGCCTCAATGAAAATTGATGAGAAAAATCGTGATGCCAAAAACATGTTCACGGGTACAACGAAGTTAGTTAGAAAGGGCAACGAATGGGTTGTAGAGAAGACAGCAGTAAATATCAATAAAGAATATTTACTACCAGAATTTAGTCGAGAAGAATACCAAACATTGAACTATGTAGGCGATAATTATTTAGAACGACTAAGGAATTTAAGTATCTTGGCTAAAAAGAAAAAAATTAAAATTCTCTATCCCTGTGAAGGGTGTGACAAAATTTGTTTGACATTTAGTGCTTTAAAACTACACAATAGAAAACACGAAGTCAATCCAAAAAGATTCGCACCAAAAGTGTGGAAACATAAATTGGTTAACGGTAAAAGTGGTAAAAATAAGAGTAATAGTAAAAGTCGTAAAGCTTACGGTAATAGTAAAAGTAAAAGTGCAATTGTGACTCAGAATAGTAATAGTAAAAGTGGTCAAGTGTATTGTAATACTAATAATAATGGGAAACAAAATAGTAGCATTAGCTATAAACGTAAAAGACTCGAAGTATTCGGTGAAAATGGTAAAATTAAAAGTAAAACGGAAGACGATAAGTTACCGAACCGTTTCGCTGCTCCCAACCCAGTGAAAAACAAACACAAGTGTGATAAAGAACTCATTGAATTCTACAAAAATAACATAAAAGGCGGAGATATAGAATTTTGGCAATTCTTGAAAATTTTCAACAAAATGAGCAGAGAAAATGTTAACGATTTTAAAGATTTAGAGAATAGATACGATTTTGGTATGCATAATATTAAAAATATTGACGAATCCAATGATATTTCTACTTCGGATAAGAAAGTTACAAAAGCTGTTAGTGTTAGTGAAAAAACTAACATAACAGCTATTACTGAAACTAGCCGGGTAATACGTAAAAAAACTAGTAAACGCAAGAAGGCGTTTACTAGAGCAATAATGATTAGTAAGAAGGAGTATTTGAAAAGACTTGAAATTAAAAACGAAATGAGGCAAAAATTGCAAGAGTGCAAATCTTAA
Protein Sequence: MKGKQRKKFTPPKKTIYTCPHCDKQFADNSSWSCHIRLHSTELPFKCELCDYKCKIKKYLSRHVKKAHTKPVGHQCAVCGKCFHFYCKLRDHMRVHTGEKPHKCSVCDKAFSSTYSLNVHKFIHTGEKPFQCRFCEYACRDNSTIRRHMERHMGISKDYPCSICNKNFKKKETLQLHVEEVHLELDTRKHACVHCNKMFKTKGTLNIHINTVHKTANRVKCEICGSRVTKNNIQAHMRRHIDVRPYKCSFKTCGRRFKDKVSSDVILPSHSANHSTLVMAMHHDNDILRAPHLPIMSSGFFKTCPMKKSSKASSVVFSLSMRLLEISSDNTFLEKEHEITIKDEPVEEVVATGGPPEFIYEVQVEKQEEMDVDTIEVPIIQPQSPQSYPIDSDTITYSKKVLSEDISRSLIERENTTEDAFDDFFIGHVLKKPEDMIDMPKDIVDEKKKERVEKCLEKLLAKVRMRKQCKVLEKLRRRYNRRIKMATSSGNKKEPNSIRYFKKPEMINQSGKTLNNTNADTEINNDNDKTMNHEDIDDEKVKNNNNSGDLEGNNYNINEERGDDKEITDHNVNKENDKPINDVKTNDQVSDDNTNKTNDEAINGDNAKKTNDEAINVDNANNTNDGAIKDDNANKTISDDNANKTNDEAINVDNANKTNDGAINVDNANKTNDGAIKDDNANKTNDGAIKDDNANKTNDGAIKDDNANKTNDDEAINDQEIDDDDAKDSDYKDSDFESNSDEEMNKNGRLTFNTHQCYICFKLFKTKNDLKRHCRIHFDICNDKMLKKCPFCGYVTNLQISRHIKLVHNIILDIPYSRIKERDTQNGSKYVFEIDKNCDLEIIPSISNLNKIASMKIDEKNRDAKNMFTGTTKLVRKGNEWVVEKTAVNINKEYLLPEFSREEYQTLNYVGDNYLERLRNLSILAKKKKIKILYPCEGCDKICLTFSALKLHNRKHEVNPKRFAPKVWKHKLVNGKSGKNKSNSKSRKAYGNSKSKSAIVTQNSNSKSGQVYCNTNNNGKQNSSISYKRKRLEVFGENGKIKSKTEDDKLPNRFAAPNPVKNKHKCDKELIEFYKNNIKGGDIEFWQFLKIFNKMSRENVNDFKDLENRYDFGMHNIKNIDESNDISTSDKKVTKAVSVSEKTNITAITETSRVIRKKTSKRKKAFTRAIMISKKEYLKRLEIKNEMRQKLQECKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -