Basic Information

Insect: Xylocampa areola
Gene Symbol: -
Assembly: GCA_935412865.1
Location: CAKXYQ010000318.1:1-28790[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.024 1.8 9.6 3.8 2 23 89 110 88 110 0.95

2 16 0.53 41 5.3 1.2 1 23 122 146 122 146 0.90

3 16 8.7e-05 0.0067 17.3 0.3 2 23 153 176 152 176 0.97

4 16 0.046 3.6 8.7 0.2 1 23 182 204 182 204 0.93

5 16 0.0022 0.17 12.8 2.9 1 23 210 232 210 232 0.98

6 16 1.6 1.3e+02 3.8 0.3 2 19 243 260 243 263 0.90

7 16 0.026 2 9.5 0.2 1 23 342 364 342 364 0.97

8 16 1.4 1.1e+02 4.1 7.2 1 23 371 393 371 393 0.95

9 16 0.00091 0.071 14.0 1.8 1 23 436 459 436 459 0.95

10 16 0.00015 0.012 16.5 0.7 1 23 466 489 466 489 0.98

11 16 0.01 0.78 10.8 0.2 2 23 511 533 510 533 0.96

12 16 0.0084 0.65 11.0 3.5 3 23 559 580 558 580 0.95

13 16 0.0052 0.4 11.7 0.3 2 23 587 608 586 608 0.94

14 16 0.00035 0.028 15.3 1.0 1 23 614 636 614 636 0.96

15 16 8e-05 0.0062 17.4 0.1 1 23 642 664 642 664 0.97

16 16 0.00025 0.02 15.8 0.7 3 23 672 693 670 693 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.024	1.8	9.6	3.8	2	23	89	110	88	110	0.95
2	16	0.53	41	5.3	1.2	1	23	122	146	122	146	0.90
3	16	8.7e-05	0.0067	17.3	0.3	2	23	153	176	152	176	0.97
4	16	0.046	3.6	8.7	0.2	1	23	182	204	182	204	0.93
5	16	0.0022	0.17	12.8	2.9	1	23	210	232	210	232	0.98
6	16	1.6	1.3e+02	3.8	0.3	2	19	243	260	243	263	0.90
7	16	0.026	2	9.5	0.2	1	23	342	364	342	364	0.97
8	16	1.4	1.1e+02	4.1	7.2	1	23	371	393	371	393	0.95
9	16	0.00091	0.071	14.0	1.8	1	23	436	459	436	459	0.95
10	16	0.00015	0.012	16.5	0.7	1	23	466	489	466	489	0.98
11	16	0.01	0.78	10.8	0.2	2	23	511	533	510	533	0.96
12	16	0.0084	0.65	11.0	3.5	3	23	559	580	558	580	0.95
13	16	0.0052	0.4	11.7	0.3	2	23	587	608	586	608	0.94
14	16	0.00035	0.028	15.3	1.0	1	23	614	636	614	636	0.96
15	16	8e-05	0.0062	17.4	0.1	1	23	642	664	642	664	0.97
16	16	0.00025	0.02	15.8	0.7	3	23	672	693	670	693	0.95

Sequence Information

Coding Sequence: CAAATATTCTCAAGTGCCGAAGGTCTCTCAAACCACCGCTGCAGAAGACGCGGCCGGAAGCGAAAGAATAAAGACCCAGTCAACCTCATTTGTATACCTACAGAAGAAGACTTCTTGAAGGTACGTGCTTTGTACTCGGAGACCATACCTAAGAAGAGAGCTCAAGGTCGTCCAAGACAAGACACGTCAACTGACAACGATCTACTTGTTATGCGTCCAAGAAAACGTCGCAGTCGAGAACCGACTTCGAACCCCCAGGTGGTGACCTGCCATAACTGCAACGAATCCTTCACCTCCAAAGTTAGACTCAAGTTTCATATGCAATTCCACGACACTTCAAACCTAGTAACCGCAGACGGTCGCTACACGTGCTCGGAATGCTCCGGCGCCACCTTCTCCACGGAGACGGAACTCTTCGACCACGTGCACTTTCAGCACGACAAGCAGAAGAGGTGGCAGTGCCCCGTCGACGGCTGCGGGAAGACATTCTTTCTCAGGGCAACCTTAACTAAACACAGTCGCACACACACAGACACACGCCGCTATGTGTGCGTTACGTGTGGGAAGAGGTTTTTAGATAAACAGACGTTAGATGAGCACGGAGTCACACATTTACAGATAAAACCCTTTCAATGCCACATATGCCTGAAGCAGTTAACCCGTCGCTCCCGACTTCGCATGCACGTTCGCGCACACGAAGAAGAGCTAGCTCCTAGGCTAGTGAGAGTGTGTGCGGTGTGCGCGAGAGCCTTCCGCGATCATCGACATGCTCAGGAACACGCGACAAAATCAACAGAATGTATAGAAGCCTTCGCCAACGAGTTGAAAGAAGAAGCAGAAGAGGTGACTGTCCAGCTGTCACCCACCAGTGGTCTGGTCAGACACACTGTGCAGATAGTTGAATCGCCAAAACTATCGAAGCCGATAAAACGGCAAGTGTCCAACGAAGTGGGTGAGCCGTTGCTCTCTCAGTTAGCCGACGAAGCTAGAGCTCTCATTAGAGTAGTCGAGATTGAGAAGGCATTCCGATGCGAATATTGTGAAGATGTGTTCTACTTGGAAAGCGGTCTGAACACCCACCGTGCGATACACAAGGGCGTCAAAAATCCCTTCACCTGCCACATCTGTAAAGTCAGCTTCGCTACCTACTCCAGATGTACAACACACAAAACAACACATGGCTTCTACAAGCGCTCTCTGGCGGACGCGAAGAAGCAAGCAGACGGCATACCGCCAGCCGACGAAGCTGCCGGGTCCTCCGCCACTGGCATACTTGGATACGGAGACTTCCCCGTCGTCAAACACTTTCTATGCGAGGATTGTGGCCGTTCCTACCTACACTGGACGTATCTACAAGTCCACAGACGTATGAAGCATGCCAACGAGAACTTCCTGTACAAATGTAACCAGTGCGAACTGACCTTTCCTAACAGTTGGAGTTTGGCGTATCACCGTAAGAAGGTGCATGGTAAGACTGGACCTGATGACCCTGGCTCCACCAGCAAGATCAGCAGGGACGACTACAGAATACCGTGTCGCGACTGTAGCGAAGTGCTACCAAACAAAACAGCTTTGTACAAACATCGGAAGAAGGAACACAGCGATGCGCCCAACCGCGCCAACAATAAAACAGGAATGTACGGCAGTGAAGAGTCAGGGTCTAGCGGCGGAGCGTGCACGCGATGTCACGCAACATTCACGCACGCTGCGGATCTGCACAAACATGTCAAAGAAGTCCACGGCCAAGAATCGGACGTATCGTGCTTGTCGTGCAACAAGTCGTTCAGCAGCCGCGCGGAGCTGTCGCCGCACTTGCGCGCGCACTGCCCGCGGCGGCCGCACGCCTGCCCCGTGTGCGGCCACGCCTTCCGCACGCTCTCCATGCGCAACGAGCACGTGCGCGTGCACACCGGCGAGCGGCCCTTCCCCTGCGACGTGTGCGGCGTCGCCTTCAGGAGGTCCACAGCGATGCGGAACCATCGTTTAATACATACCGGTGTCCGTGCGTGGGCATGCGGCCGCTGTCCGAAACGGTTCCGGATCCGATCCGACCTGCGCACGCATCTGCGGCTAAAACACCCCGCCACCATCGTCGTAGTCGAGATGGAAGGGTTAAACCCTAGTTCTGAAGAAGTAATGAAGACTCTCGCGCAACACAATGTTCCACATGACAAGGTTATAGAAATTACCAAGATGTCCTTCGCTAAGTGCTACGACCCGATCGGGGCAGTAAGGGCGGGCGATCTCTCGGTTCCGTCCGTGATTAGACAAATGGTCGGGAGTGAGAGCGTGTGGGGAGCCGACGCCGACTTCTGCGAGGAGGTGATGCTCGCAAAGGAGGCAGCGGAAAGGCTCTCCCTTTCCTCCTTCCTCCCGCAAACCCCACTCCCCCTGCCGCAGAAGGCGAGCCAAGCACCGGAGGGCACTCAACGATCTCCGGCCACCGTAAGCCGTGGACTGAGGGTGGAGGGCATGGGTGGTTCGCCACCTGATCAGCAGTCCAGCCCAAGACGGCCATGCACGTGCGAGGTGTTTGAGCAAATTAACTGTGGCCAGCCTGTACTAATCCATCTGGGTCACGGTGATTGCTGCAACGAACCCGGGACCTCAGGCACAGCGAGTGTGATCCCGTCGTGTGCCCGCGCACTGTCCGCGCTGAGCTCCGTGCCGCGCTCTCATGTCGCGTTCGGGAAACCTGCGCCGGCGCCTATGTTGGAGGAGTTCCAGCCAGCCCGTCGAGGCCGGGGAATCGCGAAAAACCCAAGGCGACCGAAGATACTACAGCGAGGAGACACCGACTCTCACCTCGCTGCTTACCCCATCGTCAGCGGAGAGGAGCTGTCCGACCTCAACGTGCAGTTACTGCTACGAGACGGTGTGCTGGTTAACGGTAACCAAATGGTTCAACTACAGTTAGATGACCCTATGTTGATGGAGTAA
Protein Sequence: QIFSSAEGLSNHRCRRRGRKRKNKDPVNLICIPTEEDFLKVRALYSETIPKKRAQGRPRQDTSTDNDLLVMRPRKRRSREPTSNPQVVTCHNCNESFTSKVRLKFHMQFHDTSNLVTADGRYTCSECSGATFSTETELFDHVHFQHDKQKRWQCPVDGCGKTFFLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCARAFRDHRHAQEHATKSTECIEAFANELKEEAEEVTVQLSPTSGLVRHTVQIVESPKLSKPIKRQVSNEVGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNTHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGIPPADEAAGSSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSLAYHRKKVHGKTGPDDPGSTSKISRDDYRIPCRDCSEVLPNKTALYKHRKKEHSDAPNRANNKTGMYGSEESGSSGGACTRCHATFTHAADLHKHVKEVHGQESDVSCLSCNKSFSSRAELSPHLRAHCPRRPHACPVCGHAFRTLSMRNEHVRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPSSEEVMKTLAQHNVPHDKVIEITKMSFAKCYDPIGAVRAGDLSVPSVIRQMVGSESVWGADADFCEEVMLAKEAAERLSLSSFLPQTPLPLPQKASQAPEGTQRSPATVSRGLRVEGMGGSPPDQQSSPRRPCTCEVFEQINCGQPVLIHLGHGDCCNEPGTSGTASVIPSCARALSALSSVPRSHVAFGKPAPAPMLEEFQPARRGRGIAKNPRRPKILQRGDTDSHLAAYPIVSGEELSDLNVQLLLRDGVLVNGNQMVQLQLDDPMLME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -