Basic Information

Insect: Xylocampa areola
Gene Symbol: Bcl11a_1
Assembly: GCA_935412865.1
Location: CAKXYQ010000196.1:301201-311691[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.005 0.39 11.7 9.1 1 23 271 293 271 293 0.98

2 12 8.7e-06 0.00067 20.4 1.6 2 23 301 322 300 322 0.95

3 12 0.022 1.7 9.7 0.6 1 23 326 348 326 348 0.98

4 12 3.6e-05 0.0028 18.5 2.1 1 23 353 376 353 376 0.97

5 12 0.00028 0.022 15.6 0.1 3 23 382 403 381 403 0.96

6 12 0.01 0.79 10.8 0.0 3 20 419 436 418 438 0.94

7 12 0.00011 0.0085 16.9 0.2 3 23 452 473 452 473 0.98

8 12 0.21 16 6.6 3.1 2 23 493 515 493 515 0.96

9 12 0.013 1 10.4 3.3 2 23 527 548 526 548 0.96

10 12 0.00016 0.013 16.4 3.6 1 23 554 576 554 576 0.99

11 12 1.2e-06 9.4e-05 23.1 0.3 1 23 582 604 582 604 0.98

12 12 0.0008 0.062 14.2 1.5 1 23 610 633 610 633 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.005	0.39	11.7	9.1	1	23	271	293	271	293	0.98
2	12	8.7e-06	0.00067	20.4	1.6	2	23	301	322	300	322	0.95
3	12	0.022	1.7	9.7	0.6	1	23	326	348	326	348	0.98
4	12	3.6e-05	0.0028	18.5	2.1	1	23	353	376	353	376	0.97
5	12	0.00028	0.022	15.6	0.1	3	23	382	403	381	403	0.96
6	12	0.01	0.79	10.8	0.0	3	20	419	436	418	438	0.94
7	12	0.00011	0.0085	16.9	0.2	3	23	452	473	452	473	0.98
8	12	0.21	16	6.6	3.1	2	23	493	515	493	515	0.96
9	12	0.013	1	10.4	3.3	2	23	527	548	526	548	0.96
10	12	0.00016	0.013	16.4	3.6	1	23	554	576	554	576	0.99
11	12	1.2e-06	9.4e-05	23.1	0.3	1	23	582	604	582	604	0.98
12	12	0.0008	0.062	14.2	1.5	1	23	610	633	610	633	0.98

Sequence Information

Coding Sequence: ATGGAGAATGTAAAAGTGTGCCGGATTTGTTTAATAATGGATGTAAAATTGCACGACCTGCAGTCATACCCTTTAGAATCATATTTTGCATCAATCATGATCGAAAGTAAGCCACTGTACACCAGTTTGCTGCCATATGCCTGCTATGAGTGTGCAGCTATAATGAAAAAGTTTTATTTATTCAGACAAAAGTATCTCAGAAGCCAAGCTTTGCTATGCAGAGTAATAGATGACTTTGGAGTGTTAACTGGTGCAGCAATAAAATCAATTGACAGACAAAATCTTCTCACTGTGTCAACCCTCACACATGTTAGTATAGAGCAAGACAGTTCAACAAAAACCCCCAACATAGAAACACCAGAATTTGTCGTAGAAGTAATTAAAAAAGAAGATCATGATGAGGTTGACATTCCTGATCACATCACCCCAGATCCAGATTCTAGTGATGATGAAGAATGCAAAGAAGAGAAAGATAAGAAGATTACAAAAATGGATGTGGAGAAGGTGGAGATTCATGTGAAAATGGATGTTCTTGAGGAGTCAGAAGGCACAGAATTAGATAAAACTACAGAAAAAGTATCAAAATTGCCATCTAAAAGAAAAACTATAGCCAGAACCAAGACACAAGCGAGACCTAAGAGAACTGCCAAAAGAGTTGTTAAAAAGAAGCAGATGGAAGTCGACAAGGAAGACCTTTCCAGAGAAGAAAAAACAGATTTTGAGGATATCACTATTGTTACCTTGTCGATAGAGGAGCAGCTAGAAGAGATAAACCAGCGGAAACAGTCTTCCAACTACCTGAACTGTCCATACAAGTGTCACTTATGTTACAAGGGGTTCAACAACATGCATACCTTGAAACATCACATCACCAAACATTCTCCAAACGCAGGCGATATAGAGTGCACAATTTGCAAGTACAGATTTAAAACGAAGCGCAATCTTCAGAGACACGCCTTAAACCACGGGAAGAAATATGTTTGTAAATTATGTCCATACAAGTCTAGTAATATAACCACTGTGAAACAACACCAAGGAACGCATAAAGGCGTCACGCATAAATGTGACTATTGTGATGAAGTATTTACTGTAAGGACGACATACGTAAGCCACATGCGTATCAAGCATCCGGGGGAGAACATATGCGGGTACTGCGGCTACTCCTTCTACAGCAAACAAGGACTCGTAGTACACAAGAACATGGTACATAAGGATCTAGAAATTAAACCTGAGGGAAATAAAGACGGCCCATACTGTGCGGAGTGTGACGTCAAATTCATGTCTTCGGAGGCATACAAGCGGCACATGGTAGTGTCAGTCAAGCATACCGGGAGTACAGACTCTATGACCGGTTGTCGTGTTTGCGGCGCGTCGTTTCCAGACCCTGAGGAGTTGCGTGTCCATCATCGTAAGGAGCATCCCAAGAGACAGTACAAGCATCACCGCACCAAACCCCCCCACAGAAAGTGGCCCGCCAAGTGCGAACATTGTTCAGAAGAGTGCGAGAATGCTCGCGCGTATTGGAAGCACTTCCGTCTGATGCACCCGGATGAGAACTATCCCTTGCAGAAGAAGTGCGTCTGCGATATTTGTGGCAAGCGATTTATGTGTAACGCCCTGCTAGTAATGCACAAACGTACCCACTTCGGGGAGCGTCCCTTCAAATGCTCGCAATGTGACAAAGCTTGCTTCACGGCCTTCGACCTTAGAGTGCATCAGCAGAAACACTCCGACACGAGACCCTTCCCGTGCAATATATGTTCTATGGCCTTTAAACGAAAAGAAGCACTGGAAAGACATTTAAAGATCCACTCTGGCGATAATCCATACAAGTGTGAGATATGTGGTGTAGCGTTCAACAAGTCTTGTACGAGAACACTTCACGTGAGAACAGTACACACTAAGGAACCCGCGCCGCCGCGGAAACACAGAAACAAACCTAACAAGTAA
Protein Sequence: MENVKVCRICLIMDVKLHDLQSYPLESYFASIMIESKPLYTSLLPYACYECAAIMKKFYLFRQKYLRSQALLCRVIDDFGVLTGAAIKSIDRQNLLTVSTLTHVSIEQDSSTKTPNIETPEFVVEVIKKEDHDEVDIPDHITPDPDSSDDEECKEEKDKKITKMDVEKVEIHVKMDVLEESEGTELDKTTEKVSKLPSKRKTIARTKTQARPKRTAKRVVKKKQMEVDKEDLSREEKTDFEDITIVTLSIEEQLEEINQRKQSSNYLNCPYKCHLCYKGFNNMHTLKHHITKHSPNAGDIECTICKYRFKTKRNLQRHALNHGKKYVCKLCPYKSSNITTVKQHQGTHKGVTHKCDYCDEVFTVRTTYVSHMRIKHPGENICGYCGYSFYSKQGLVVHKNMVHKDLEIKPEGNKDGPYCAECDVKFMSSEAYKRHMVVSVKHTGSTDSMTGCRVCGASFPDPEELRVHHRKEHPKRQYKHHRTKPPHRKWPAKCEHCSEECENARAYWKHFRLMHPDENYPLQKKCVCDICGKRFMCNALLVMHKRTHFGERPFKCSQCDKACFTAFDLRVHQQKHSDTRPFPCNICSMAFKRKEALERHLKIHSGDNPYKCEICGVAFNKSCTRTLHVRTVHTKEPAPPRKHRNKPNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -