Xcam020112.1
Basic Information
- Insect
- Xiphydria camelus
- Gene Symbol
- nfxl1
- Assembly
- GCA_963678675.1
- Location
- OY783200.1:6802602-6809171[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 3.4 2.2e+04 -3.9 1.3 15 19 126 130 125 130 0.81 2 21 0.17 1.1e+03 0.3 0.5 4 10 161 167 160 167 0.95 3 21 1.3e-07 0.0008 19.9 16.9 1 19 175 192 175 192 0.99 4 21 1.9e-05 0.12 12.9 15.7 1 18 228 245 222 246 0.89 5 21 1.4 9.2e+03 -2.7 0.7 9 14 252 257 250 257 0.72 6 21 0.25 1.6e+03 -0.3 0.2 5 10 270 275 269 277 0.92 7 21 0.29 1.8e+03 -0.5 12.3 3 19 283 300 281 300 0.91 8 21 4.2e-05 0.27 11.8 10.1 1 18 336 353 336 354 0.97 9 21 1.7 1.1e+04 -2.9 0.3 1 5 363 367 363 368 0.92 10 21 0.0023 15 6.2 7.8 1 12 388 399 388 399 0.94 11 21 0.93 5.9e+03 -2.1 1.0 6 10 409 413 408 413 0.92 12 21 1.1e-07 0.00069 20.1 14.3 1 19 419 437 419 437 0.93 13 21 0.00022 1.4 9.5 7.6 9 19 485 495 483 495 0.90 14 21 0.0023 15 6.2 5.7 1 11 505 514 505 515 0.95 15 21 1.7 1.1e+04 -2.9 5.8 14 18 547 551 547 552 0.89 16 21 0.66 4.2e+03 -1.6 1.2 6 10 578 582 577 582 0.85 17 21 8e-06 0.051 14.1 6.1 1 11 588 598 588 599 0.96 18 21 4 2.5e+04 -5.2 4.3 6 10 615 619 612 619 0.86 19 21 0.0019 12 6.5 17.2 3 19 628 644 627 644 0.94 20 21 8.1e-06 0.051 14.1 10.9 1 18 689 708 689 709 0.87 21 21 1.9 1.2e+04 -3.0 0.9 6 10 739 743 738 743 0.89
Sequence Information
- Coding Sequence
- ATGAGGAAGTACCGAAGGGCGCAAGCCGAGAACCAGGCGTCCATCCAGAGGCACCTCGTAGCGAACCGCAAAGTGGATTCTTCCAGCGAGGACGAGAACGAGGGGCAGGAAGAGGTCCTCCAGAAGGCCGTGGGAGACATCCTCTCGAACTACCGGCACGAAGGCGGCGACGCCGAGAAGATCTTGTCCTATCTGTCTGATACTTTCCAATCCGGGGGAGCTGTCTGTCTGATATGCATCTCGACGGTGAAGAAGAGCGACGCAATATGGAGCTGCGAGCAGTGCTTCTCCTTTGTGCATTTGCCCTGCATTCAGCATTGGATCCGGGACAGTTTGGGCTACAAGCGAGAGAAGGGAATCGCCCTGGTGTGGACTTGCCCGAAATGCCGCACGGAATACGGAGAGGACCGCGTGCCGCGGCACTACGAATGCTTCTGCGGCAAGACAGTAGACCCGCCCTTCCAGCCGTGGTCCCTACCGCACTCCTGCGGCGAGCCCTGCGGCAAGCCGCTGCGTCCCGAGTGCGGCCACCGATGCGTTCTCCTCTGCCACCCGGGACCCTGCCCGCCCTGCCCGAAGATGATCTCGTCGCGGTGCTACTGCGGCGCCGAACCCGCTCGTCCGCGTCGCTGCAACGCCAAGGAGTGGAGCTGCGGTAATCGCTGCGGCAAGCGACTCGCCTGTCCCGAGCACGGCTGCGCGGAGGAGTGCCACCCGGGCGACTGCCCGCCCTGCGCCGAGATCGTGTCCTCCGCCTGCCACTGCGGCAACGAGACGCGGCCGCGCAAGTGCTCGGAGAAGCACTGGCGGTGCGAGAAACCCTGCGGCAAGCGCTTCTCCTGCGACGTGCACGTCTGCCCGGGCATCTGCCACCGGCCGCAGGACTGCGGCGACTGCCCCACCGAGCGCAGCAGGAGCTGTCCCTGCGGCAAGAAGCGCTACGCCATCTCCTGCAGGCAGGAGCAGGCGCCCACCTGCGGCGACACCTGCGGCAAGCCGCTCGACTGCGGCTCGCACCGTTGCAACTCGCGCTGCCACTACGACCGCTGCGGCCAGTGTCTCGAAGTCGCGACGAAGACTTGTCGGTGCGGCGCACATCGCAAGGAACTCGCCTGCGCGAAGGAGTTTCACTGCGACACCAAGTGCAAGCAGATGCGGCTCTGTGGGAATCATCCGTGCAACAGAAAATGCTGCGACTGCCTTGTAAAGAACAGTTTCAACGCCTGCGAAAAGGTGTGCGATCGCGCGCTGAACTGCCGCCGGCACAAGTGCTCCGCGCCCTGCCACAGCGGGCCGTGCTACCCCTGCCCGCGCACCGACGTCATCCAGTGCCGCTGCGGCGGCAGTAAGATCACCGTGCCATGCGGTACCGCGAAGCGCGTCAAACCGCCGAGCTGCAACCGCAAGTGCCGCATCCCGCCCGTTTGCCACCATCCCAAGCGCGAGTCGCACAAGTGCCATCAGGGCGCGTGTCCGCCCTGCCGCAAGGTGTGCGCCCTGCCGCACGAGCGCTGCGGCCACGCGTGCCCGGCCACCTGCCACGCCAAGGTCTGGCTCCGCGTGAAGCTGAACGGCGTGAGCGCGCGTCCCGCGGGCCCGTGGGAGAAGCAGCGCGAGGAGATGCAACTGAAGACGCTGCCCTGTCCGCCATGCGAGGTGTCCGTCATGGTCACCTGCCTGGGCGGACACGAGACGCTGCCCTGGCCGTGCTACCGGGCGATCTCCAGCTCCTGCCAGCGGCCGTGCGGCAGGACGCTCGCCTGTGGCAATCACACCTGTGAGATGACGTGCCACGCGGTGCCGTCATCGGGCGACGGGTCGGACAATGCCGACTGCGAGGAGTGCGAGAGACCGTGCTCCTTCGCGAGGCCGGACGGCTGCAATCATCCGTGCCCCAAAGTCTGCCATCCGAAGCCCTGCGACCCCTGCAAGCAACTCGTGCGCGTGTCTTGCCACTGCGGGATCAACACCTTGTATAAACGCTGCGCGGAGCTGACCTCTTCGACGGAGGAACGCCGCGTGGAGATGCTGAAGTGCGGGAACCAGTGTCCGAGGAACTATCCCTGCGGACATCGTTGCGTCGACATCTGCCATCCGGGAGACTGTCGCAGAGGCGAATCGTGCgacaagaaagtgaaactgtGGTGCAACTGCAAACGACTGAAGCGGGACTTCTCCTGTGTGAAAGTTCGAGCGGGCGGCGCCGCCGTGGAGTGCGATGAGGTTTGTCGCGAGAAAAAGCGCGAGCGCGAGCGTCTGCAGCAGCTCGAGGCGGAGAAGAAGCGCAAGGAGGAGGAGCTGCGCAACCAAAGAGAGATAGAGAAGTTCGAGAGGAAATTTAAACCGCGGCGCAAGGGCAAAGACAAGCTCCAGGTCGACAAAATGACCGGAAAGGGAAACACTGTCTGCAAAAAAGCAGTGCTTTTAGCTGTCGCGATAGGTATCGCGGCTGTCCTTGTAATTTACATTCAAACTTGGTCCTAA
- Protein Sequence
- MRKYRRAQAENQASIQRHLVANRKVDSSSEDENEGQEEVLQKAVGDILSNYRHEGGDAEKILSYLSDTFQSGGAVCLICISTVKKSDAIWSCEQCFSFVHLPCIQHWIRDSLGYKREKGIALVWTCPKCRTEYGEDRVPRHYECFCGKTVDPPFQPWSLPHSCGEPCGKPLRPECGHRCVLLCHPGPCPPCPKMISSRCYCGAEPARPRRCNAKEWSCGNRCGKRLACPEHGCAEECHPGDCPPCAEIVSSACHCGNETRPRKCSEKHWRCEKPCGKRFSCDVHVCPGICHRPQDCGDCPTERSRSCPCGKKRYAISCRQEQAPTCGDTCGKPLDCGSHRCNSRCHYDRCGQCLEVATKTCRCGAHRKELACAKEFHCDTKCKQMRLCGNHPCNRKCCDCLVKNSFNACEKVCDRALNCRRHKCSAPCHSGPCYPCPRTDVIQCRCGGSKITVPCGTAKRVKPPSCNRKCRIPPVCHHPKRESHKCHQGACPPCRKVCALPHERCGHACPATCHAKVWLRVKLNGVSARPAGPWEKQREEMQLKTLPCPPCEVSVMVTCLGGHETLPWPCYRAISSSCQRPCGRTLACGNHTCEMTCHAVPSSGDGSDNADCEECERPCSFARPDGCNHPCPKVCHPKPCDPCKQLVRVSCHCGINTLYKRCAELTSSTEERRVEMLKCGNQCPRNYPCGHRCVDICHPGDCRRGESCDKKVKLWCNCKRLKRDFSCVKVRAGGAAVECDEVCREKKRERERLQQLEAEKKRKEEELRNQREIEKFERKFKPRRKGKDKLQVDKMTGKGNTVCKKAVLLAVAIGIAAVLVIYIQTWS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -