Xcam016372.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xiphydria camelus
Gene Symbol
GATA-B
Assembly
GCA_963678675.1
Location
OY783198.1:3206431-3238716[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-17 3.6e-14 52.6 3.2 1 34 699 731 699 733 0.97
2 2 2.5e-18 7e-15 54.8 2.6 1 35 753 786 753 787 0.97

Sequence Information

Coding Sequence
ATGGACGTCGAGTGTATACCTACCCTTACCTACTGCCCGCCGCGAGCCCTGGTGCAGTACGCGGAGGGTGCGACGGAGTCGGCTTCCCGCGTCCAGAGGGAGGAGGTCGAGTTCGAGGAGATAAGGGCGGAGGGAGGAGAAGGAGCGGCGATCAAGATCGAGGCCAGCTCCGACCGCGGTCTCGAATCCCAGCGACACGAGCAtcggcggcagcagcagcagcagcagcagcagcagcagcatcagcAACAGCAGTTGAACTATGCTGACGCGGAGGAAGGCGGGAATGGCGTGGGCGTGCTGGAGGCGGGTCAGCCGGAAATGGAAAATGGCGCCCTGGTGGAACCGACGAGCGCCGAAGTGGTCGCTATTCCCGTGCAGAGCGCCGACCACGAAGAGGACGCCAGCGCCACCTACACCCTCCACCAGCTGGGTTACCACCCGGTAGTATCGCGTCACGTCGCTCAAGAGAGGGGTTACCTGACGGACAGCTCGCCCCCGCGTTACGAGGCCAACGACACGAGGGAAATTCGGCAACAGCAACCgcaactgcagcagcagcagcaacaggtctcccaccaccaccaccaccaccaccgcgaGCCGCAACACTACGCACAGCTCGGAGCGGGAGAGGTCTCGGCGGTTCCCGAGGGAGGGGATAGCCGCCACCCGGCCGAGACCTCCGTCCCGCCGGAGGAAAACCGTGGCACCAGTCACATGCCTCACTCCACGATGCATCGGTACGGAGTGGAGACGCTCTCTCCGACGGACCATCATCACCaccagcagcaacagcaacagcaacagcagcagcagcagcaacaccaccaacACCACATCTCGCGGCAGCACGCGCTCCCCAGCCACAGGCACCACCCGTACCAGAAGCCGGGGGGGCAGCACCATGACGCGGCCGCCGAGTCCGGCCATCGTCAGGACGCCGAGGAGGACGTCGAGCGCGTCAGCGGCATCGCGGCGGCGATGCGCGGTGCGCGCGGCGAATTCAACCTCGCCCTCTTCCCGAACCTgaccggcggcggcggtggcggcggcggcggcggcggcggcagtaCCGGGAGCGCCGGTACCGGCAACGGCAGCGGGGCCAatcaccatcaccaccaccatcaccacgcTCACCTCGAGGACGTGCTACCGGAGGACCCGTATCTCCACCATCAGATCCGCGCACCGAGCGGCGGCGGAGGGATCTCGCCGCCCGTTCGGACCACCGGCAGTTCGCCGGGCTCCAGTCGCAGTCCGCGCGACGACCAGGACCTGCAGGCCTCGCCGCACGGGCACGCCGGCGGCGCGCGGAACGACGCCGGCGGTTACAGCCCCGGCGATCAGGGAAAGCTGCAGTCGTTCACGCATCTCACCGCGATGCAACCGCCGTCGGTGCACGCCGGCAATCACGCGCTCCAGGACGCCGAGAACGTCTCGGGTCAGCTGTACATGGAGTCCATGTATCACCCCGGCGGCACTCCCCATCACCATCAGGATCACGATCAGGGATCGTCCACGCCGCACTCGCCGAGCGGGCCGCTCTCCAGTTCCTCGCTGTACCGCACGATGACCGACGGCTACAGCCTCCCCTACATGACGGGCAGCCCCACGGAGCTCACGGCCTCCCCCCAGCAGCTCTGGACCTCCCAAGGCCTGAGTCAGCTTCCGACCATTTCCGAGGACTACGGCAGCGGCAAGTCGAGCGCCACGGCGAACCACCAGAGCCTTCCGGCCTTCTCGCAGCCCTTCGGCGGCAGGTCGTCCTTCAGGGGATGCAATCCGCCCTACACGATACCGCAACCGGCCGGCGGTGGAGGCGGCGGAAGCGGTagcagcggcggcggtggcggcggtggcggcggcggcggtggaggCGCCAGCACCGGAGGCGGCAACGGAGATCCGACCTGTTGGGCGTACGTGCCGCCGTCGAGCGACGCCGTGGGCTTGCCGTACACCATTCCGTCGTTGCGACGCCAGGCTTCCACCACCTCCGTGACCCCGACGCAACATCAGCTCACCGCCGCGGCCAGCTTGACTGTCGTGCACAACATCGAAGCGGAGTACTTTACGGAGGGCAGAGAATGCGTGAACTGCGGGGCGATATCGACGCCCCTCTGGCGAAGGGACGGCACGGGGCATTACCTCTGCAACGCCTGCGGCCTCTACCACAAGATGAACGGCATGAATCGTCCCCTAGTCAAACAGCCGCGGCGCCTGTCCGCTGTGAAGCGGCAAGGAACCTCTTGCAGCAACTGCCACACGACGGTAACGTCGTTGTGGCGTAGGACCGCGCAGGGCGAGCCGGTGTGCAACGCCTGCGGGCTCTACTTCAAGCTGCACAACGTACCGCGGCCGCTCACGATGAAGAAGGACAACATTCAGACACGCAAGAGGAAACCGAAGGGCGGCATGAAGACGTCCGACACGCCGATCTCCGGAAGCGTTGCCCCGTGCatcaaaaataacaataacaataacaacaacaacaataacaacATCAAACTGGAGCCAGAGAACTACGGCGACCTGAGGCTGAGTCACACCAGCATCGCCCAGACGAGTTACGCCAACTCCATCTACTGCGCCAGTCCGCAGCAGGCGGGCAGGATCGTCTCGTACCAACCGGCGGCTCCGCTCTACTACGACATGGTGACCTCGCAGCAGCACCAGCAACTGATCGACAGCCATTCCCCGAAAATCGAGTGCCCGTCGCCCCCGTGCGTCACGCGATCGCCGACCCTGATGTCGGCGAGCCACTCGCCCGATCGTCGCATCGGGAACCTGTCGCCGCTGGAGAGGCCGACGGTGGTGTCGATATCGTCCTAA
Protein Sequence
MDVECIPTLTYCPPRALVQYAEGATESASRVQREEVEFEEIRAEGGEGAAIKIEASSDRGLESQRHEHRRQQQQQQQQQQHQQQQLNYADAEEGGNGVGVLEAGQPEMENGALVEPTSAEVVAIPVQSADHEEDASATYTLHQLGYHPVVSRHVAQERGYLTDSSPPRYEANDTREIRQQQPQLQQQQQQVSHHHHHHHREPQHYAQLGAGEVSAVPEGGDSRHPAETSVPPEENRGTSHMPHSTMHRYGVETLSPTDHHHHQQQQQQQQQQQQQHHQHHISRQHALPSHRHHPYQKPGGQHHDAAAESGHRQDAEEDVERVSGIAAAMRGARGEFNLALFPNLTGGGGGGGGGGGGSTGSAGTGNGSGANHHHHHHHHAHLEDVLPEDPYLHHQIRAPSGGGGISPPVRTTGSSPGSSRSPRDDQDLQASPHGHAGGARNDAGGYSPGDQGKLQSFTHLTAMQPPSVHAGNHALQDAENVSGQLYMESMYHPGGTPHHHQDHDQGSSTPHSPSGPLSSSSLYRTMTDGYSLPYMTGSPTELTASPQQLWTSQGLSQLPTISEDYGSGKSSATANHQSLPAFSQPFGGRSSFRGCNPPYTIPQPAGGGGGGSGSSGGGGGGGGGGGGGASTGGGNGDPTCWAYVPPSSDAVGLPYTIPSLRRQASTTSVTPTQHQLTAAASLTVVHNIEAEYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSAVKRQGTSCSNCHTTVTSLWRRTAQGEPVCNACGLYFKLHNVPRPLTMKKDNIQTRKRKPKGGMKTSDTPISGSVAPCIKNNNNNNNNNNNNIKLEPENYGDLRLSHTSIAQTSYANSIYCASPQQAGRIVSYQPAAPLYYDMVTSQQHQQLIDSHSPKIECPSPPCVTRSPTLMSASHSPDRRIGNLSPLERPTVVSISS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-