Xcam000162.1
Basic Information
- Insect
- Xiphydria camelus
- Gene Symbol
- Zfy1
- Assembly
- GCA_963678675.1
- Location
- OY783191.1:1810265-1816306[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.13 11 7.3 6.6 1 23 127 150 127 150 0.97 2 18 0.0043 0.34 11.9 0.2 2 23 166 187 165 188 0.95 3 18 0.047 3.8 8.6 0.5 2 23 222 243 221 243 0.97 4 18 4.8 3.9e+02 2.3 1.4 1 23 249 271 249 272 0.92 5 18 4.1 3.3e+02 2.6 0.2 6 23 494 511 492 511 0.87 6 18 0.003 0.24 12.4 6.5 2 23 523 545 522 545 0.96 7 18 3.1 2.5e+02 2.9 1.0 1 23 608 630 608 630 0.82 8 18 3.1 2.5e+02 2.9 1.0 2 23 814 835 813 835 0.96 9 18 2.6 2.1e+02 3.2 0.0 3 23 852 872 850 872 0.94 10 18 0.013 1.1 10.4 0.2 1 23 880 902 880 902 0.98 11 18 0.54 44 5.3 2.3 2 23 1000 1021 999 1021 0.95 12 18 0.74 60 4.9 0.3 3 23 1033 1053 1033 1053 0.96 13 18 0.0043 0.35 11.9 0.2 1 23 1130 1152 1130 1152 0.98 14 18 0.049 4 8.6 0.3 1 23 1229 1251 1229 1251 0.97 15 18 3.4e-05 0.0027 18.5 0.6 1 23 1257 1279 1257 1279 0.98 16 18 0.0073 0.59 11.2 2.6 1 23 1327 1349 1327 1349 0.97 17 18 0.0018 0.15 13.1 2.1 1 23 1355 1377 1355 1377 0.99 18 18 0.29 24 6.1 0.2 2 23 1475 1496 1474 1496 0.97
Sequence Information
- Coding Sequence
- ATGTCCGCGAGAACGCCTCGCTTGCGTGCGTTACGTCCCCGTCCATCCCAAAAACCGTCGTCCAGGTCACCAAACAAGTCACAAGTTAGAAATGACAAAGAGGACGTTGAAGAAGAGGATATCGCGATGGAACAAGAACAGGAAGAAACTCAGGACCAAGAAGAGATGGAAGTCAATGATACTGATAGTGCATTGGACGAAAGTGGCGATGGAGATAGACTGGTGATCAAGGAAGAGCCGGAGGATGTCGTATTGGACGATACTGAAGGGGCAAAGAAGGATTTCCAGTGTAAATCCTGCAAGCCACCTCGGGACTTCCCGCATCTCAAGGGGTACCTTCATCATCTTAAGAAGGAGCACAAGTTAAAGGTGCGGTGTTACGACTGCCCACATTGCGACTTCGTTTGTCAACACGTGAAAAAGTTGCAGAGGCACTTCCGCGTGTCTCACGAAGACTTACAAGACAAAATCGCGACGGAATCTGCCGAACGAAGCAGATGTCCCATGTGCGCGTACGTTGCGGTTAATCCTAGAGATCTGGAGACTCATCAACGAGTGCATCACCTGAAAAGGAGATTCTTCCGCTGCGTCAAGTGTTCCTATGTAACGCACGTACGCGCACGTTACACCAAACACGTCAAGTACCATTCCATGCCCATGATTAAGTGCGACGCGtgcgattttcgtactccctaCAAGTGGAATCTGGATCGTCACACGCGCAATCACGGCGGAGACGGGGCCTTCCAGTGTCGCGTTTGTAATTTCACCGCGGATATTCGACAGAGTTTGACTGTACACGAAACGAATCACCACGAGCCACCAGTTGGACAGCCCCATCGAAAGTCAAGTACCCCTTTTGAGCGGAAACCACGAAATAGTCCAAAGCGTTATAATCAGGTAGGCGCCAGCGATTTTCGAGAGGCCTTGCAGTCGCCGACGAGTTCAGCCAATTCTAAAAGCGTCAGTCCTTCCAAATCAGTCACACCGGAAAAGGTGGACGGTATTATAGCCGGGGCAATCGCAGGTGCCGAGTGCATAGCTTTAAAATGCGAGGAAAAAGGCTGCCAGTTTATTACGGCTTGGGATTCCGAGATGCAGCGTCACTTGGCCGAATCGCACGCGCCGAACGCGATCAACAAATCTAAGAAACCATTACCGATGTTGATTCCTTTGACTCCCCCGGGCAATGCGAAATCTAGTAACTCGTCTAAGAGCGGGTCCTCTGCGACGTTACTGAAAGTACCTCGGGTGAGGGTGAGGCCGGAACTCGCGCAGATCGCAAGGGACACGGAAATGGCCAGGATGTACGGAAACCAGCAGAGCAACGTCTTGAAGAAAGAGGTCGGCGCGACAGATTCGTTCGAGAAAAAGAATGCCTCGTTCTTTGATAAGCTGAAGGAGAGGCTAATGGTATCGTCAGGGAGCAATGGTGTACCCGAGGTGGCTGTAAGTACCACGAACGATTTGAAGTGTTGGTGCACCTTCGAAGCAAGCAGTCTCGACGAACTGGCCAACCACAAGCGGACTCATAATACGGCTCTTAGCGTATCTCTGGGCACGACGCGTTGCCCTAAGTGTAGAAGACGTTGCAAGAGCTCGACCGATCTCCAAGTCCACATGCGCCTCTGCCATTCGACGGGTAGCGATACCACGGCTGCCGATAATGGTCCAGAAAGTTATACGGAATTTCGCTCCGCGGCATATCGCGGCGAGTACGCGTTTCCCTTTCAAGTGGACTGGGACGGCAATTTCGGGGGACTCAATTCTTCTGGATCGTCGGTTGAGGGTGGTTCTACACATCCGAGCGGACGCAGGGTATTCAAGTGTCCCCACTGCCCGTTCTGGGCTTCGACAGCAAGTCGGTTTCACGTACATATAGTGGGTCACTTGAACCGGAAACCGTTCGAGTGCTCGCTGTGTGCTTATCGATCAAATTGGCGGTGGGATATAACAAAGCACATCAAACTTAAGGCCGCTAGAGATCCCGCGCATATGACCGCAAGAGTTCTCATGACTGACGAGACCGGTCGGCGCAACTACTCCAAGTACAACAAGTATCTAGCTCAGATCGACCAGCATCCAACGGATGAGCGGAGCACGGAGGATCGCGGTATGGATAACCGCAGCGCGGACGAACCTCCTACCAAAGTACTGATCGTGAGCGATCCTAAAGAGTATCCTCAACCACCAGAACTTACACCAGCTCCCGTTCCCGCTCCGCCGGTCGATAATAACGAATCCGCTGAAGAGTCGTCGGCTCTGCCACTACGACCACCGCCTCCGCTAAAGGCGGCTAATGCCACTCGTGGTCGGGGCCAGTCGTTGCTTAAAAACAACCCTGCAACTTCGAATGCAAGCACGAGTAGCACCCCTCTGCCAACCCCTGTCACTACCGTTGCCGCAGCGAGTCCAGAAGAAAGCAAACGTACTTTGTGGAAGTGTAAACGTTGCAATTATCGTGACTCCAATAAGGATACCGTACTCATTCACGTCAAGTCTCATTACGAACCATCGAATCAAATTGCCGACGATGAAAAGAACGCGTTCGGTTGCGGAGATTGTCCGTTTTCAGCCCCTGATGCTGCGTCGCTGGCAATTCATCGCGTACATCATCGTCCGAATCTGGAAGCCATTTTCAAGTGCTACCTCTGCCCGTATTACGTTAGCACAAAAGCGGAGCTATTGGAACACGCCAGGCTACACGGAGAGGAACTGGCAGTTGTGCATCAGCGTAGCGTGGATTCCGATACGTCGCTGAAGCGTTCACCTCAGTTGAATCAACGGTCCTTGATTCAAGATGATCAATCGAAGGATGACGTATCGCTAGAACAAATCGTCCGCGCGCCATCGCCGACCAATTCGTCGACAGAGTCAGCATCGTCCAAGGGAACGTTACCGGACCAATCGCCACCGCTCTTGTTAGATACGCGTGCGTTACCCGACGCACCGTTAGTCTGGGTTTCGCGATCTAACGGCACCCTAGCAAAGATGCTCAAGTGCCGTCATTGTCCTCACGTATCTTCGCGCCGAGCCGAAATCCGCGAGCACGAGACCATGCACTTGAACTCTGCCTCTCAAGGCCCATTCATCGGCTGCCCCGATTGCAGCTTCTCTTGCGCGCGAAGAGAGGTGATGGAGGCTCACGCCGATATGCATTCGGGATCACTGGGCACCATCcactgcctcgtcgacgaaggTCGGTCCGATAGTCAGCAGCTTGGCGATTTAACCACTCTCCTCGGCCTTTCGAGTCCGCCAACGTTAGGGACCGAGCCCGACCTGAGAGACACACGACTTGTTCATTGTTGCGGTAAGTGCCCAGCGCGATTCCTCTGCGAGAAAGAGCTGCGGATCCACTTGCGATATCATTCCACGGAGCTGGCTTACTCCTGTCAATGGTGTTCTTACGCGGCCAGACAACCCGCTCATCTACTCGCGCATCAGAAAGCCCATTCTCCCGAGTATCAAGAACGTACGAAGTACCTGCTCTCCTTATACGGTCATTCACAACGTTACGCACCACCCACCACCGCTTGCGTCGAGGCTAACGATCAGGAATCGACCGACGGTGGTTCGAGCAACGTCGCTTGGATCGTCGTCGAAGTGACCTCGGGGCACGGTAGTCATTCACTCACCGCCGGTCACCGAGCTCCCGGCCAAGAGGAGAGTGGGAATCAAGTGTTCACTTGCGCTAAATGCCCGGCGCGTTATTTCAAACTCGATGCTTTGGAGTATCACATGACGCTGCATGGTACGAATAACAGATTCAAGTGCAGCGAATGCGATTACTCGTCGAAAACGGCGCAGAATTTGGTGAAGCATCAAATCGTGCATCGCCGACACGCAGAAGCTAGCGAAAACGTGTCTCAGCGTCTCCTACCCCCGCCGGATCCACAATTCGGCGTTCTCATGAGGGGAAATCCGAATTTCGTATATCCGGGTTACTTGAGGAACGGCCGATTGAAGGAGAAGCGATACAAATGTCACAAATGCCCCTCGGCCTTCGAGAAACGAGAGCAGTACAGAGTTCATCTGACTCTGCACGGCGCTAAGCAGCGTTATCGGTGCAATACCTGCGACTATTCCGTAAAATATTACGCGAATTATGTTCAGCACTTGAAGAAACACCAAGCGAACGCGCAAGCACAAGCCTCTCGTCGACAATTCGAGGAGGATACGATAATCGTCGACAGCGACGGCGGCACGGACGTGGTGGTACCGACTCCGCGTTCCGCCAAGTCTTTGACGAAATGCTCACCTGGTCCTGCGGTGGTACCGCCTGCCGGTAATGTTACTGCTCCTCCTTCTGTGACAACTGGAACAGGGATTCCAGTTTCCAATCAAGACAAACAATCGCTCATGCTAATGCAAAGGAAAGGCGTGCTACCATCACCGGGCGAAGCTGATGCAGAAGTGATTCGTTGTCAAGTTTGTCCGTTCGGTACTCCGGATAAGGAGACAATGGATGCTCATAAGCGTCGCCATGGCATAGAAAGAATGACCCCACCATGTCCTCATTGCGACTACATTCCTCGAAAGGATGAGAATATCGGGGACCACATCCGGTTGCATTTTACGCGATTGTATAAACCCGAATCTTATTTGATCGCTGAATTACTATCACTCACGTTTCGCCGAGTCGGTCCTCGGGGAAAAGAGGACCGAGCGAGCGAAAGCGAATTGCTTTTTAAAGAGTGCGCGGACGGTAGATTCCTCCCGATAATGGATGCAAACCCATTGCCACTCGCTCTCTCCTCCAGTGCAAATGGTTTTCAGGAAAAAGTTATCGTAGATCCAAACACTGGTGAGGCGAAACAGCACGTCGCTGTTTAA
- Protein Sequence
- MSARTPRLRALRPRPSQKPSSRSPNKSQVRNDKEDVEEEDIAMEQEQEETQDQEEMEVNDTDSALDESGDGDRLVIKEEPEDVVLDDTEGAKKDFQCKSCKPPRDFPHLKGYLHHLKKEHKLKVRCYDCPHCDFVCQHVKKLQRHFRVSHEDLQDKIATESAERSRCPMCAYVAVNPRDLETHQRVHHLKRRFFRCVKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGDGAFQCRVCNFTADIRQSLTVHETNHHEPPVGQPHRKSSTPFERKPRNSPKRYNQVGASDFREALQSPTSSANSKSVSPSKSVTPEKVDGIIAGAIAGAECIALKCEEKGCQFITAWDSEMQRHLAESHAPNAINKSKKPLPMLIPLTPPGNAKSSNSSKSGSSATLLKVPRVRVRPELAQIARDTEMARMYGNQQSNVLKKEVGATDSFEKKNASFFDKLKERLMVSSGSNGVPEVAVSTTNDLKCWCTFEASSLDELANHKRTHNTALSVSLGTTRCPKCRRRCKSSTDLQVHMRLCHSTGSDTTAADNGPESYTEFRSAAYRGEYAFPFQVDWDGNFGGLNSSGSSVEGGSTHPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAARDPAHMTARVLMTDETGRRNYSKYNKYLAQIDQHPTDERSTEDRGMDNRSADEPPTKVLIVSDPKEYPQPPELTPAPVPAPPVDNNESAEESSALPLRPPPPLKAANATRGRGQSLLKNNPATSNASTSSTPLPTPVTTVAAASPEESKRTLWKCKRCNYRDSNKDTVLIHVKSHYEPSNQIADDEKNAFGCGDCPFSAPDAASLAIHRVHHRPNLEAIFKCYLCPYYVSTKAELLEHARLHGEELAVVHQRSVDSDTSLKRSPQLNQRSLIQDDQSKDDVSLEQIVRAPSPTNSSTESASSKGTLPDQSPPLLLDTRALPDAPLVWVSRSNGTLAKMLKCRHCPHVSSRRAEIREHETMHLNSASQGPFIGCPDCSFSCARREVMEAHADMHSGSLGTIHCLVDEGRSDSQQLGDLTTLLGLSSPPTLGTEPDLRDTRLVHCCGKCPARFLCEKELRIHLRYHSTELAYSCQWCSYAARQPAHLLAHQKAHSPEYQERTKYLLSLYGHSQRYAPPTTACVEANDQESTDGGSSNVAWIVVEVTSGHGSHSLTAGHRAPGQEESGNQVFTCAKCPARYFKLDALEYHMTLHGTNNRFKCSECDYSSKTAQNLVKHQIVHRRHAEASENVSQRLLPPPDPQFGVLMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCNTCDYSVKYYANYVQHLKKHQANAQAQASRRQFEEDTIIVDSDGGTDVVVPTPRSAKSLTKCSPGPAVVPPAGNVTAPPSVTTGTGIPVSNQDKQSLMLMQRKGVLPSPGEADAEVIRCQVCPFGTPDKETMDAHKRRHGIERMTPPCPHCDYIPRKDENIGDHIRLHFTRLYKPESYLIAELLSLTFRRVGPRGKEDRASESELLFKECADGRFLPIMDANPLPLALSSSANGFQEKVIVDPNTGEAKQHVAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -