Basic Information

Insect: Xiphydria camelus
Gene Symbol: RREB1
Assembly: GCA_963678675.1
Location: OY783199.1:25698351-25705028[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.022 1.8 9.7 0.0 1 23 37 59 37 59 0.96

2 16 0.00023 0.018 15.9 0.3 1 23 73 95 73 95 0.98

3 16 6e-07 4.9e-05 24.0 2.3 1 23 101 124 101 124 0.98

4 16 0.012 0.97 10.5 0.1 1 23 209 233 209 233 0.94

5 16 0.33 26 6.0 2.0 2 23 239 261 238 261 0.94

6 16 2 1.6e+02 3.5 0.4 1 19 318 336 318 338 0.89

7 16 0.088 7.1 7.8 0.1 1 23 452 474 452 474 0.96

8 16 3.7e-05 0.003 18.4 0.3 1 23 483 505 483 505 0.98

9 16 0.00046 0.037 15.0 2.5 1 23 511 534 511 534 0.97

10 16 0.00074 0.06 14.3 3.1 1 23 944 967 944 967 0.97

11 16 0.00087 0.07 14.1 0.1 3 23 1267 1287 1265 1287 0.97

12 16 0.77 63 4.8 6.0 1 23 1293 1316 1293 1316 0.97

13 16 0.017 1.4 10.0 1.4 1 23 1354 1378 1354 1378 0.93

14 16 1.4 1.1e+02 4.0 2.6 1 23 1462 1485 1462 1485 0.92

15 16 0.003 0.24 12.4 0.3 2 23 1537 1558 1536 1558 0.96

16 16 5.3 4.3e+02 2.2 8.7 1 23 1564 1586 1564 1586 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.022	1.8	9.7	0.0	1	23	37	59	37	59	0.96
2	16	0.00023	0.018	15.9	0.3	1	23	73	95	73	95	0.98
3	16	6e-07	4.9e-05	24.0	2.3	1	23	101	124	101	124	0.98
4	16	0.012	0.97	10.5	0.1	1	23	209	233	209	233	0.94
5	16	0.33	26	6.0	2.0	2	23	239	261	238	261	0.94
6	16	2	1.6e+02	3.5	0.4	1	19	318	336	318	338	0.89
7	16	0.088	7.1	7.8	0.1	1	23	452	474	452	474	0.96
8	16	3.7e-05	0.003	18.4	0.3	1	23	483	505	483	505	0.98
9	16	0.00046	0.037	15.0	2.5	1	23	511	534	511	534	0.97
10	16	0.00074	0.06	14.3	3.1	1	23	944	967	944	967	0.97
11	16	0.00087	0.07	14.1	0.1	3	23	1267	1287	1265	1287	0.97
12	16	0.77	63	4.8	6.0	1	23	1293	1316	1293	1316	0.97
13	16	0.017	1.4	10.0	1.4	1	23	1354	1378	1354	1378	0.93
14	16	1.4	1.1e+02	4.0	2.6	1	23	1462	1485	1462	1485	0.92
15	16	0.003	0.24	12.4	0.3	2	23	1537	1558	1536	1558	0.96
16	16	5.3	4.3e+02	2.2	8.7	1	23	1564	1586	1564	1586	0.97

Sequence Information

Coding Sequence: ATGGCCTGTCCAACAGTGACGACAGACAGCAGTCCCGATCAACGACAGAGCAGCGAGGCGCAGACGGACACGGCGTCGTCGCCACTGGTCGAACAACCGGAAGGTACACATCCCTGTCCAGCCTGCCCCGCCGTTCTCCCGAGTTCGCGCGAGCTCACCAATCACCTCCGCGGCCACAATTCGCCGCGCAGCACCGACTGCAGCGGCGAGGAGGAGTACTCCTGCGGCGTGTGCCACAAGGTCCTCAGTTCCGCCAGCTCCCTGGACCGTCACGTCCTCGTGCACTCCGGAGAGCGTCCCTTCCAGTGCAAGCACTGCGACATGGCCTTCACCACCAACGGAAACATGAACAGGCACCTCAGAACGGCGCACCGGGGACTCTCGCCCAACAGCTACACCGATTCCGAGGTCAGCAGCGACTCCGAGAGGCCGTCGAAGAGGCGACGCGTCGAGGAGTACAACAACAACGACATAGCGAAGCGCAACTCGCCCGATTTCGTGAGCCAGCGAAAGTCGCCGGACTTTGCGGACGAGGCGACCGAGTCGCAGAGGAAGAGCTGCAAGATACTGCTCGGCAACTCGAGGACGGAGATCAGGGGCGGCCTCGACGAGACCGAGAACTCTCACGACTGCCCGGTCTGCGGGAGGCGGGAGTTCGCGACGAGCGCCCTCCTCGAGGCTCACCTCGAGCGCAGTCATCCGGACTTCCCGTCCAAGTGCGACGCGTGCAACCTCTCCTTCAAGAACCACCGAGTCCTCAATCTCCACCGCTTCATGGTTCACGTCGCCGAGCACCCGATCGGCGGCGTCGCCGCGCGAAACCTGCGCAATTCCGTCGTCGGCTTCGACGATCTCACCTTCGTCGACTTCTCGTCGGACAAGTTCACCGCCATCGCGAGGGCTGTCTGCGAGCAGTCCCTCCATCGGCCCGCATCCGGCGAGGCGGCCAAATTCCAGTGCTCCAAGTGTCTCAGGGCGTTCCCCTGCCGCTCGGCTCTGGACGCCCACGAGATCGACTGCGGGATCCCGAATTCCCAGGCGAGGAGCAACATCGACGATCCGTCCAGGCGGGACGACTTCTTCGCCGGCCTCGATCTGCAGAACAAGGCGGCTCTCGCGGAAGCGAAGGAGGGCAAGGACCTGGCCGACATACAGAGCATCATCTCCGTCACGTCCGTGCCGCTGCTGCAGAACTTTCCCAGATCGGACGCGAGCACCCCGGACAACGGAATCAAGATGCACGCGAGCCTCGGTTCCTCCGGCTCCTCCGGGACGCCCTCCTCCGAGTACCACGAGGAGGAGGCGCAAGACGCCTTCGCCGCGGAGTTTCGAAAGATGAAGCTCAAGGGCGAGTTCCCCTGCAGACTGTGCACCGCCGTCTTTCCGAATTTGCGCGCGCTCAAGGGTCACAATCGTGCCCACATGGGCGTGGGACCGGGCATGCCCTATCCCTGCAACATGTGCCCCTACACCAGCACCGACAAGGCCACCTTGGTGAGACACCTGAGGTCGCACAACGGCGACCGGCCCTACGAGTGTTCCATCTGCAATTACGCCTTCACGACCAAAGCCAATTGCGAGCGCCACGTGAGAAATCGTCACGGTAAGCTCTCCCGCGAGGACATCAAGAGCGTCCTCATCTACCACCCCAACGAGGACTCCACCAACGACAGTCTCGAGAGGATGTCGCCGAGAGGCGTGAGGGAGGACGCCCGCAAGTCGCTGGTCTATCCCAACGAACGCGAGGAATCCCTCCAACGACCCGCGCCTTCGCTGTATTCCTCGTCGGCACCCCTCGACGTCAAGACGGAGATCAGAGTGATCGAGGAGGCGAAATTGCGACAACCCGGAATACCTCCATTGGGAGTACCGACGATGGCGACGActgcggtggcggcggcggcggcggcagcggcaaATCCCTACGAACGGTCGGAACTATTCCCGAGGCCGCCCACCGTTCAGCCCCTGGAATTGACTCACCGAAACGCCGAGGAACAGTCCTCGCACGTTGGCCGGGATCTCATGATGCTGAAGCGCGCCTTCGCCAAgcaccacgacgacgacgatcagGAATCGAGGTCGTCGGACGGCAACGTGTCTCTAGTCAGCGAAACCAAACAGGAAGCTCACCAAAGAATGCAAGAGAGCCCGATGGACTTGAAGAAGCCGACGGGCGACTCGGCCGCCGTCGGCCACAGCGAGGACGCACCTCTGGATCTGTCCATGGACGTGCTCGACCTGAGCAACAAGTCGAAGAGTAAGGCGAACGAGCCCGTCGAAAAGTCGGAGGGCTACGGGAGAAATCCGAAGGAATTCTACAACGCGACGAATCAGTTGTTGCTGACACAAGCTCTCTTGAAGGCCGGCCAAGCCGGTCCTCAGCCGCCGTCCTTGGAGGCCCTCTACGCCAACGCCCACCTGATCTACAGGAATTTCGGATCGTTCCCCTCCGGCGTCGGTGCCGGGCTCTTGCCGCCCTACTTGTTCAATCCCCACCTGTTCGGTCAGGACTTCGCGGTGAAGGATCGGCTGCAGAAGGAACTCGTCAGGGGTCTCCAACTGACCAGTGGCGGCACACTGGTGGAACCGGCCATCGGCAATGCCGCGTTCGGCACGGCATTCCCTCAGGGCAGGGACTTGCCGGCGCACTCGGTCAACGAGCGAACCGATTACGGCAAACTCCTCTCGCCGAAGATGATCAACAAGCCGGTGACGCCGCGCGACAAGGTGGAGAACTCGCCGTCGTCGAATTCCGTCAAGATGGTGATAAAAAACGGCGTTCTCATGCCCAAGCAGAAGCAACGAAGATACAGAACCGAACGACCCTTTACCTGTGAACACTGTTCGGCGAAATTCACCCTGCGCAGCAACATGGAGAGGCACATCAAGCAACAGCATCCCCAGCATTGGAGCCAAAGACCGCGAGGAGGACACTCCACCAGAGGACGACCCCCGGCGAATCCACCCACCCTGCTGCAGAACCTCGGACAACCCATGCCGCAACAACAGCTGTCCGATCAGTTTTCGAATATCGGCCCGAAGATAAGACCGCCCGCCGCGATTCCGGAGTACGGTAGCAAGCACTCGATCTCCGACCAGGTCAAGTACGCGATTCTCGCGCaacagttaaaaattaacaagaACGAGGAAAACGACACCGAGGGCGAGTTGGTCATCGACGAGGAGCCCTCGAAGGATGCTCCGGAAGCTTCCGTCAAAGAGGAAACGCATCAGCCCACGAGTCTGCTCAGAGTGAAACTGGAAGATCGCGGGGACCTGACGAAGGACAAAGACATCTTGAAGCAACACGTAAATGACTTCTCGAAGGACGGTCCCAGTTGTCGAGTGCCGAGGGAGAATCGAGAAGGTCGACGCGACGATCCCGACGAGGAACAGGAGGAAATCAAGTCGGAGGAGGCCGAATGCGACGATGGCTCGGAGAAGGACGGCGCTGTAGAAATGGATCACACCGATGAAGCGCCCAAGAGCGTCGCTAGTCAGAACCGTGAAGATACCGTGAAGAACGAGGACGGCGCGGTGGATCTCGCGAGCGTCTCCAAATTACTGGACAACGCGTCGCAGCAGTACCAGCAATTTCAGCCGCAGTACCTCAGCGACGAAGAGGGTCTCGTCGCCTCGACCAGCGACTGCAATAATTCCGGAAGCGACGAGAAATCCGAATCCGATAATTCCGTCAACTCGGCGACCTCCAGCGCCTCGTCTagtaagaaaaaaaagaagaagaagaagaagaagaaaaagtcCGCGTATTCCATGGCGCCGAACAGAGTGATCTGTCCCTATTGCGAGAGACCCTTCCCCTGGACTTCGTCCCTCAGGAGGCACATTCTGACGCACACCGGTCAGAAACCCTACCAATGCGTCCACTGCTCCCTCCTCTTCACCACCAAATCGAACTGCGATCGCCACTTGCTGCGGAAGCACAAAACCAATCCGAATAGGGTTCGTCGCGCGAGGAATTCCTCCTCGCCGGAAACTCAAGCGGTGCCGACGAACAACAACACCTTCTCCATGAGAAACGTCCCGGAAAGACCGTACAAATGCAATCAGTGTCCCAGCTCTACCTTTTCGACTCTGGGCAACCTGAAGAAGCATCGCTCGGCGAAACACTCGCGCAAAACCAAATCTAGATCGGATACTTCCGTGAGCGAGTCGAATGTCAGCCCGTCCGGGTCTCTCAAGCAGAACGATCAGAGCGGTTACGAGAGCCAGTCGTCGAGCGTTTCCGAGCAGATGCAGAACTCGCCGGCCGTGGCAGTCGTCGTCAAGGCAAATCCGAACATCTCGGGCACGACCAATGACAATTCGCGTTCGAGGAGAACGTCTCCGAGGTCGTCCCCCGGTCCTGCTGATGCGCCCTTCAAGTGCCACTTGTGCGACAGCGGATTTGCCGACAGACAAGACTGCCTCGAACACATCAAGGACAATCACAAACGATCGTACGAGATGTTGGTAGCTAAAGGAGCCTTGGATATGGACATAGAGACGCCCgaggagcagcagcagcaaccgcAGCCACAGCAAAATCCTAGCGACGGCGAGGAGAAGCGTGGCAAATTTCCCGATTACAGCAATAGGAAGGTGGTGTGTGCCTTTTGCCTGCGTCGATTTTGGTCAGCGGAGGATCTCCGTCGTCACATGAGAACCCACACGGGCGAGAGACCCTTCTTCTGCGACATATGCTGCCGAAGGTTCACCCTGAAGCACAGCATGTTGCGTCATCGCAAAAAGCACGAGTCCGTCGACTCGCCCATGTACATCGGCACCAGCGGTGACGAGGAAGGCTCGCCCGCTCAACCACCCACGATAACGCCGAGGAGCCAGCAGCAGCCGGCTCTGGTGTCGAACGCCACCAACAACCCCAGAATCCAAGACAGAGCCTCCCTGCCCACCGTGGCGACGGTCGCGACGGGGGACGCCGCACCTAGCGGACTGCTGAGGTTCAATCCCTACGAGAAGCTGGCCACCCTCACCGGCAAACTGGCGAACGCCCACCAGAATCAGGAGCCCAACGAGAGCAACGACAACGACTTGATTTCGAATTTACTGGGTATCGGGGACAAGAGCTTCATCGACCGGGTCCTCCAGTCTTCGGTGGACGATGCGGCAATATTACTGGGTGTGAAGGGGAATCACGAGTGA
Protein Sequence: MACPTVTTDSSPDQRQSSEAQTDTASSPLVEQPEGTHPCPACPAVLPSSRELTNHLRGHNSPRSTDCSGEEEYSCGVCHKVLSSASSLDRHVLVHSGERPFQCKHCDMAFTTNGNMNRHLRTAHRGLSPNSYTDSEVSSDSERPSKRRRVEEYNNNDIAKRNSPDFVSQRKSPDFADEATESQRKSCKILLGNSRTEIRGGLDETENSHDCPVCGRREFATSALLEAHLERSHPDFPSKCDACNLSFKNHRVLNLHRFMVHVAEHPIGGVAARNLRNSVVGFDDLTFVDFSSDKFTAIARAVCEQSLHRPASGEAAKFQCSKCLRAFPCRSALDAHEIDCGIPNSQARSNIDDPSRRDDFFAGLDLQNKAALAEAKEGKDLADIQSIISVTSVPLLQNFPRSDASTPDNGIKMHASLGSSGSSGTPSSEYHEEEAQDAFAAEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSICNYAFTTKANCERHVRNRHGKLSREDIKSVLIYHPNEDSTNDSLERMSPRGVREDARKSLVYPNEREESLQRPAPSLYSSSAPLDVKTEIRVIEEAKLRQPGIPPLGVPTMATTAVAAAAAAAANPYERSELFPRPPTVQPLELTHRNAEEQSSHVGRDLMMLKRAFAKHHDDDDQESRSSDGNVSLVSETKQEAHQRMQESPMDLKKPTGDSAAVGHSEDAPLDLSMDVLDLSNKSKSKANEPVEKSEGYGRNPKEFYNATNQLLLTQALLKAGQAGPQPPSLEALYANAHLIYRNFGSFPSGVGAGLLPPYLFNPHLFGQDFAVKDRLQKELVRGLQLTSGGTLVEPAIGNAAFGTAFPQGRDLPAHSVNERTDYGKLLSPKMINKPVTPRDKVENSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSAKFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLQNLGQPMPQQQLSDQFSNIGPKIRPPAAIPEYGSKHSISDQVKYAILAQQLKINKNEENDTEGELVIDEEPSKDAPEASVKEETHQPTSLLRVKLEDRGDLTKDKDILKQHVNDFSKDGPSCRVPRENREGRRDDPDEEQEEIKSEEAECDDGSEKDGAVEMDHTDEAPKSVASQNREDTVKNEDGAVDLASVSKLLDNASQQYQQFQPQYLSDEEGLVASTSDCNNSGSDEKSESDNSVNSATSSASSSKKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKTNPNRVRRARNSSSPETQAVPTNNNTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSAKHSRKTKSRSDTSVSESNVSPSGSLKQNDQSGYESQSSSVSEQMQNSPAVAVVVKANPNISGTTNDNSRSRRTSPRSSPGPADAPFKCHLCDSGFADRQDCLEHIKDNHKRSYEMLVAKGALDMDIETPEEQQQQPQPQQNPSDGEEKRGKFPDYSNRKVVCAFCLRRFWSAEDLRRHMRTHTGERPFFCDICCRRFTLKHSMLRHRKKHESVDSPMYIGTSGDEEGSPAQPPTITPRSQQQPALVSNATNNPRIQDRASLPTVATVATGDAAPSGLLRFNPYEKLATLTGKLANAHQNQEPNESNDNDLISNLLGIGDKSFIDRVLQSSVDDAAILLGVKGNHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -